RNA–Protein interactions for RNA: ENST00000398978.7

COL13A1-205, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS P4 TSL 5 BASIC

Gene COL13A1, Length 3,093 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-205ENST00000398978 BMS1Q14692 1282 aaKnown RBP22.26■■□□□ 1.15
COL13A1-205ENST00000398978 SEC23AQ15436 765 aa22.26■■□□□ 1.15
COL13A1-205ENST00000398978 INTS5Q6P9B9 1019 aaKnown RBP22.26■■□□□ 1.15
COL13A1-205ENST00000398978 MAPK8IP1Q9UQF2 711 aa22.26■■□□□ 1.15
COL13A1-205ENST00000398978 CCDC196A0A1B0GTZ2 297 aa22.25■■□□□ 1.15
COL13A1-205ENST00000398978 PLCD1P51178 756 aa22.25■■□□□ 1.15
COL13A1-205ENST00000398978 FAM47AQ5JRC9 791 aa22.25■■□□□ 1.15
COL13A1-205ENST00000398978 BICDL1Q6ZP65 573 aa22.25■■□□□ 1.15
COL13A1-205ENST00000398978 NUTM2AQ8IVF1 878 aaPredicted RBP22.25■■□□□ 1.15
COL13A1-205ENST00000398978 CCDC12Q8WUD4 166 aaPredicted RBP22.25■■□□□ 1.15
COL13A1-205ENST00000398978 PAGE5Q96GU1 130 aa22.25■■□□□ 1.15
COL13A1-205ENST00000398978 EIF5P55010 431 aaKnown RBP22.25■■□□□ 1.15
COL13A1-205ENST00000398978 NR1I3Q14994 352 aa22.25■■□□□ 1.15
COL13A1-205ENST00000398978 CCDC152Q4G0S7 254 aa22.25■■□□□ 1.15
COL13A1-205ENST00000398978 IFIT1BQ5T764 474 aaKnown RBP22.25■■□□□ 1.15
COL13A1-205ENST00000398978 NT5DC1Q5TFE4 455 aa22.25■■□□□ 1.15
COL13A1-205ENST00000398978 TMCO3Q6UWJ1 677 aa22.25■■□□□ 1.15
COL13A1-205ENST00000398978 ESR2Q92731 530 aa22.25■■□□□ 1.15
COL13A1-205ENST00000398978 CCDC34Q96HJ3 373 aa22.25■■□□□ 1.15
COL13A1-205ENST00000398978 RAD9BQ6WBX8 426 aa22.25■■□□□ 1.15
COL13A1-205ENST00000398978 CCDC24Q8N4L8 307 aa22.25■■□□□ 1.15
COL13A1-205ENST00000398978 PNPLA7Q6ZV29 1317 aa22.24■■□□□ 1.15
COL13A1-205ENST00000398978 IGSF22Q8N9C0 903 aa22.24■■□□□ 1.15
COL13A1-205ENST00000398978 ZCCHC17Q9NP64 241 aaKnown RBP22.24■■□□□ 1.15
COL13A1-205ENST00000398978 MTMR7Q9Y216 660 aa22.24■■□□□ 1.15
COL13A1-205ENST00000398978 ABL1P00519 1130 aa22.24■■□□□ 1.15
COL13A1-205ENST00000398978 GNAT2P19087 354 aa22.24■■□□□ 1.15
COL13A1-205ENST00000398978 KRT2P35908 639 aa22.24■■□□□ 1.15
COL13A1-205ENST00000398978 PPP2R3AQ06190 1150 aa22.24■■□□□ 1.15
COL13A1-205ENST00000398978 ZSCAN10Q96SZ4 725 aaPredicted RBP22.24■■□□□ 1.15
COL13A1-205ENST00000398978 RNF41Q9H4P4 317 aaPredicted RBP22.24■■□□□ 1.15
COL13A1-205ENST00000398978 BAZ2AQ9UIF9 1905 aaKnown RBP22.24■■□□□ 1.15
COL13A1-205ENST00000398978 STX10O60499 249 aa22.23■■□□□ 1.15
COL13A1-205ENST00000398978 KLRK1P26718 216 aa22.23■■□□□ 1.15
COL13A1-205ENST00000398978 DACH1Q9UI36 760 aa22.23■■□□□ 1.15
COL13A1-205ENST00000398978 CEP131Q9UPN4 1083 aa22.23■■□□□ 1.15
COL13A1-205ENST00000398978 CTNND2Q9UQB3 1225 aa22.23■■□□□ 1.15
COL13A1-205ENST00000398978 SYNRGQ9UMZ2 1314 aa22.23■■□□□ 1.15
COL13A1-205ENST00000398978 TAF1P21675 1872 aa22.23■■□□□ 1.15
COL13A1-205ENST00000398978 MYH6P13533 1939 aa22.23■■□□□ 1.15
COL13A1-205ENST00000398978 DHX8Q14562 1220 aaKnown RBP22.22■■□□□ 1.15
COL13A1-205ENST00000398978 PUF60Q9UHX1 559 aaKnown RBP22.22■■□□□ 1.15
COL13A1-205ENST00000398978 SASH3O75995 380 aa22.22■■□□□ 1.15
COL13A1-205ENST00000398978 APTXQ7Z2E3 356 aaKnown RBP22.22■■□□□ 1.15
COL13A1-205ENST00000398978 ZNF384Q8TF68 577 aa22.22■■□□□ 1.15
COL13A1-205ENST00000398978 KIFC2Q96AC6 838 aa22.22■■□□□ 1.15
COL13A1-205ENST00000398978 CCDC87Q9NVE4 849 aa22.22■■□□□ 1.15
COL13A1-205ENST00000398978 AKR1B15C9JRZ8 316 aaPredicted RBP22.22■■□□□ 1.15
COL13A1-205ENST00000398978 PTGDRQ13258 359 aa22.22■■□□□ 1.15
COL13A1-205ENST00000398978 ITPK1Q13572 414 aa22.22■■□□□ 1.15
COL13A1-205ENST00000398978 TMTC2Q8N394 836 aa22.22■■□□□ 1.15
COL13A1-205ENST00000398978 NOL10Q9BSC4 688 aaKnown RBP22.22■■□□□ 1.15
COL13A1-205ENST00000398978 USP17L12C9JPN9 530 aa22.21■■□□□ 1.15
COL13A1-205ENST00000398978 USP17L21D6R901 530 aa22.21■■□□□ 1.15
COL13A1-205ENST00000398978 CYP2D6P10635 497 aa22.21■■□□□ 1.15
COL13A1-205ENST00000398978 CASP14P31944 242 aa22.21■■□□□ 1.15
COL13A1-205ENST00000398978 MCM7P33993 719 aa22.21■■□□□ 1.15
COL13A1-205ENST00000398978 PIK3AP1Q6ZUJ8 805 aa22.21■■□□□ 1.15
COL13A1-205ENST00000398978 ZNF579Q8NAF0 562 aaKnown RBP22.21■■□□□ 1.15
COL13A1-205ENST00000398978 PHF20Q9BVI0 1012 aa22.21■■□□□ 1.15
COL13A1-205ENST00000398978 RNF26Q9BY78 433 aaPredicted RBP22.21■■□□□ 1.15
COL13A1-205ENST00000398978 A0A1B0GTH6 734 aa22.21■■□□□ 1.15
COL13A1-205ENST00000398978 CAMTA2O94983 1202 aa22.21■■□□□ 1.15
COL13A1-205ENST00000398978 FUT2Q10981 343 aa22.21■■□□□ 1.15
COL13A1-205ENST00000398978 CATIPQ7Z7H3 387 aa22.21■■□□□ 1.15
COL13A1-205ENST00000398978 EFCAB8A8MWE9 144 aa22.2■■□□□ 1.14
COL13A1-205ENST00000398978 MAP3K9P80192 1104 aa22.2■■□□□ 1.14
COL13A1-205ENST00000398978 ANKRD36CQ5JPF3 1778 aa22.2■■□□□ 1.14
COL13A1-205ENST00000398978 RGS22Q8NE09 1264 aa22.2■■□□□ 1.14
COL13A1-205ENST00000398978 RIOK1Q9BRS2 568 aaKnown RBP22.2■■□□□ 1.14
COL13A1-205ENST00000398978 VPS16Q9H269 839 aa22.2■■□□□ 1.14
COL13A1-205ENST00000398978 ZRANB2O95218 330 aaKnown RBP eCLIP22.2■■□□□ 1.14
COL13A1-205ENST00000398978 NTSR2O95665 410 aa22.2■■□□□ 1.14
COL13A1-205ENST00000398978 PPFIBP1Q86W92 1011 aa22.2■■□□□ 1.14
COL13A1-205ENST00000398978 ACRBPQ8NEB7 543 aa22.2■■□□□ 1.14
COL13A1-205ENST00000398978 MRFAP1Q9Y605 127 aa22.2■■□□□ 1.14
COL13A1-205ENST00000398978 ARGLU1Q9NWB6 273 aaPredicted RBP22.2■■□□□ 1.14
COL13A1-205ENST00000398978 AATFQ9NY61 560 aaKnown RBP eCLIP22.2■■□□□ 1.14
COL13A1-205ENST00000398978 RNF225M0QZC1 329 aaPredicted RBP22.19■■□□□ 1.14
COL13A1-205ENST00000398978 FXR1P51114 621 aaKnown RBP eCLIP22.19■■□□□ 1.14
COL13A1-205ENST00000398978 CUL4BQ13620 913 aa22.19■■□□□ 1.14
COL13A1-205ENST00000398978 TTC38Q5R3I4 469 aa22.19■■□□□ 1.14
COL13A1-205ENST00000398978 FCHSD1Q86WN1 690 aa22.19■■□□□ 1.14
COL13A1-205ENST00000398978 SRBD1Q8N5C6 995 aaKnown RBP22.19■■□□□ 1.14
COL13A1-205ENST00000398978 SPATA20Q8TB22 786 aa22.19■■□□□ 1.14
COL13A1-205ENST00000398978 COL1A1P02452 1464 aaPredicted RBP22.19■■□□□ 1.14
COL13A1-205ENST00000398978 PPP1R3GB7ZBB8 358 aa22.19■■□□□ 1.14
COL13A1-205ENST00000398978 XBP1P17861 261 aa22.19■■□□□ 1.14
COL13A1-205ENST00000398978 ERFEQ4G0M1 354 aa22.19■■□□□ 1.14
COL13A1-205ENST00000398978 SPATA1Q5VX52 437 aa22.19■■□□□ 1.14
COL13A1-205ENST00000398978 RASGRP4Q8TDF6 673 aa22.19■■□□□ 1.14
COL13A1-205ENST00000398978 TUBB4AP04350 444 aa22.18■■□□□ 1.14
COL13A1-205ENST00000398978 GYS2P54840 703 aa22.18■■□□□ 1.14
COL13A1-205ENST00000398978 TROAPQ12815 778 aa22.18■■□□□ 1.14
COL13A1-205ENST00000398978 NPY5RQ15761 445 aa22.18■■□□□ 1.14
COL13A1-205ENST00000398978 KANK3Q6NY19 840 aa22.18■■□□□ 1.14
COL13A1-205ENST00000398978 EEF2KMTQ96G04 330 aa22.18■■□□□ 1.14
COL13A1-205ENST00000398978 PLIN2Q99541 437 aa22.18■■□□□ 1.14
COL13A1-205ENST00000398978 PARD6BQ9BYG5 372 aa22.18■■□□□ 1.14
COL13A1-205ENST00000398978 TFCP2L1Q9NZI6 479 aa22.18■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms