RNA–Protein interactions for RNA: ENST00000398959.2

SRMP1-201, Transcript of spermidine synthase pseudogene 1, humanhuman

BASIC

Gene SRMP1, Length 885 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRMP1-201ENST00000398959 RBPJLQ9UBG7 517 aa13.51□□□□□ -0.25
SRMP1-201ENST00000398959 POLR3DP05423 398 aaPredicted RBP13.5□□□□□ -0.25
SRMP1-201ENST00000398959 PRKAR2AP13861 404 aaKnown RBP13.5□□□□□ -0.25
SRMP1-201ENST00000398959 ZKSCAN1P17029 563 aaPredicted RBP13.5□□□□□ -0.25
SRMP1-201ENST00000398959 Q3C1V9 767 aa13.5□□□□□ -0.25
SRMP1-201ENST00000398959 GPR142Q7Z601 462 aa13.5□□□□□ -0.25
SRMP1-201ENST00000398959 TRMT44Q8IYL2 757 aaKnown RBP13.5□□□□□ -0.25
SRMP1-201ENST00000398959 CLASRPQ8N2M8 674 aaKnown RBP13.5□□□□□ -0.25
SRMP1-201ENST00000398959 PORCNQ9H237 461 aa13.5□□□□□ -0.25
SRMP1-201ENST00000398959 PLXNA1Q9UIW2 1896 aa13.5□□□□□ -0.25
SRMP1-201ENST00000398959 A0A0G2JMZ2 1700 aa13.5□□□□□ -0.25
SRMP1-201ENST00000398959 USP17L15C9J2P7 530 aa13.49□□□□□ -0.25
SRMP1-201ENST00000398959 USP17L13C9JLJ4 530 aa13.49□□□□□ -0.25
SRMP1-201ENST00000398959 USP17L11C9JVI0 530 aa13.49□□□□□ -0.25
SRMP1-201ENST00000398959 USP17L18D6R9N7 530 aa13.49□□□□□ -0.25
SRMP1-201ENST00000398959 USP17L22D6RA61 530 aa13.49□□□□□ -0.25
SRMP1-201ENST00000398959 USP17L17D6RBQ6 530 aa13.49□□□□□ -0.25
SRMP1-201ENST00000398959 USP17L19D6RCP7 530 aa13.49□□□□□ -0.25
SRMP1-201ENST00000398959 USP17L20D6RJB6 530 aa13.49□□□□□ -0.25
SRMP1-201ENST00000398959 HMMRO75330 724 aa13.49□□□□□ -0.25
SRMP1-201ENST00000398959 IFIT2P09913 472 aaKnown RBP13.49□□□□□ -0.25
SRMP1-201ENST00000398959 XRCC5P13010 732 aaKnown RBP13.49□□□□□ -0.25
SRMP1-201ENST00000398959 RGS2P41220 211 aa13.49□□□□□ -0.25
SRMP1-201ENST00000398959 CCNA1P78396 465 aa13.49□□□□□ -0.25
SRMP1-201ENST00000398959 USP17L24Q0WX57 530 aa13.49□□□□□ -0.25
SRMP1-201ENST00000398959 SLC9C2Q5TAH2 1124 aa13.49□□□□□ -0.25
SRMP1-201ENST00000398959 PLEKHH3Q7Z736 793 aa13.49□□□□□ -0.25
SRMP1-201ENST00000398959 KIF1BPQ96EK5 621 aa13.49□□□□□ -0.25
SRMP1-201ENST00000398959 C12orf42Q96LP6 360 aa13.49□□□□□ -0.25
SRMP1-201ENST00000398959 DNAJC2Q99543 621 aaKnown RBP13.49□□□□□ -0.25
SRMP1-201ENST00000398959 RIOK1Q9BRS2 568 aaKnown RBP13.49□□□□□ -0.25
SRMP1-201ENST00000398959 CRNKL1Q9BZJ0 848 aaKnown RBP13.49□□□□□ -0.25
SRMP1-201ENST00000398959 NBPF3Q9H094 633 aa13.49□□□□□ -0.25
SRMP1-201ENST00000398959 ZNF236Q9UL36 1845 aa13.48□□□□□ -0.25
SRMP1-201ENST00000398959 GOLIM4O00461 696 aa13.48□□□□□ -0.25
SRMP1-201ENST00000398959 PDE6AP16499 860 aa13.48□□□□□ -0.25
SRMP1-201ENST00000398959 VCAM1P19320 739 aa13.48□□□□□ -0.25
SRMP1-201ENST00000398959 SHMT1P34896 483 aa13.48□□□□□ -0.25
SRMP1-201ENST00000398959 PLCD1P51178 756 aa13.48□□□□□ -0.25
SRMP1-201ENST00000398959 MAP3K21Q5TCX8 1036 aa13.48□□□□□ -0.25
SRMP1-201ENST00000398959 WDR78Q5VTH9 848 aa13.48□□□□□ -0.25
SRMP1-201ENST00000398959 RPAP2Q8IXW5 612 aaPredicted RBP13.48□□□□□ -0.25
SRMP1-201ENST00000398959 C7orf61Q8IZ16 206 aa13.48□□□□□ -0.25
SRMP1-201ENST00000398959 APBA2Q99767 749 aa13.48□□□□□ -0.25
SRMP1-201ENST00000398959 KIAA1683Q9H0B3 1180 aa13.48□□□□□ -0.25
SRMP1-201ENST00000398959 PRO3102Q9H379 93 aa13.48□□□□□ -0.25
SRMP1-201ENST00000398959 MCM9Q9NXL9 1143 aa13.48□□□□□ -0.25
SRMP1-201ENST00000398959 DDX19BQ9UMR2 479 aa13.48□□□□□ -0.25
SRMP1-201ENST00000398959 RABGAP1Q9Y3P9 1069 aa13.48□□□□□ -0.25
SRMP1-201ENST00000398959 MYH4Q9Y623 1939 aa13.48□□□□□ -0.25
SRMP1-201ENST00000398959 ZNF532Q9HCE3 1301 aa13.47□□□□□ -0.25
SRMP1-201ENST00000398959 MPHOSPH10O00566 681 aaKnown RBP13.47□□□□□ -0.25
SRMP1-201ENST00000398959 GLRX3O76003 335 aaKnown RBP13.47□□□□□ -0.25
SRMP1-201ENST00000398959 CACNB2Q08289 660 aaPredicted RBP13.47□□□□□ -0.25
SRMP1-201ENST00000398959 MORN1Q5T089 497 aa13.47□□□□□ -0.25
SRMP1-201ENST00000398959 CATSPERGQ6ZRH7 1159 aa13.47□□□□□ -0.25
SRMP1-201ENST00000398959 ACER1Q8TDN7 264 aa13.47□□□□□ -0.25
SRMP1-201ENST00000398959 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.47□□□□□ -0.25
SRMP1-201ENST00000398959 USP6NLQ92738 828 aa13.47□□□□□ -0.25
SRMP1-201ENST00000398959 C11orf49Q9H6J7 331 aa13.47□□□□□ -0.25
SRMP1-201ENST00000398959 OGDHLQ9ULD0 1010 aa13.47□□□□□ -0.25
SRMP1-201ENST00000398959 DNAH12Q6ZR08 3092 aa13.46□□□□□ -0.25
SRMP1-201ENST00000398959 A0A1W2PPC1 479 aa13.46□□□□□ -0.25
SRMP1-201ENST00000398959 CNMDO75829 334 aa13.46□□□□□ -0.25
SRMP1-201ENST00000398959 SEPT2Q15019 361 aa13.46□□□□□ -0.25
SRMP1-201ENST00000398959 CCL14Q16627 93 aa13.46□□□□□ -0.25
SRMP1-201ENST00000398959 POTEEQ6S8J3 1075 aa13.46□□□□□ -0.25
SRMP1-201ENST00000398959 SDR42E1Q8WUS8 393 aa13.46□□□□□ -0.25
SRMP1-201ENST00000398959 RPAP3Q9H6T3 665 aaPredicted RBP13.46□□□□□ -0.25
SRMP1-201ENST00000398959 STAP2Q9UGK3 403 aa13.46□□□□□ -0.25
SRMP1-201ENST00000398959 COG6Q9Y2V7 657 aa13.46□□□□□ -0.25
SRMP1-201ENST00000398959 IVNS1ABPQ9Y6Y0 642 aa13.46□□□□□ -0.25
SRMP1-201ENST00000398959 RAB11FIP3O75154 756 aa13.45□□□□□ -0.26
SRMP1-201ENST00000398959 CCND3P30281 292 aaPredicted RBP13.45□□□□□ -0.26
SRMP1-201ENST00000398959 MNX1P50219 401 aaPredicted RBP13.45□□□□□ -0.26
SRMP1-201ENST00000398959 GABPAQ06546 454 aa13.45□□□□□ -0.26
SRMP1-201ENST00000398959 MAP2K5Q13163 448 aa13.45□□□□□ -0.26
SRMP1-201ENST00000398959 LBX2Q6XYB7 198 aa13.45□□□□□ -0.26
SRMP1-201ENST00000398959 LCORLQ8N3X6 602 aa13.45□□□□□ -0.26
SRMP1-201ENST00000398959 EDC3Q96F86 508 aaKnown RBP13.45□□□□□ -0.26
SRMP1-201ENST00000398959 CHMP4BQ9H444 224 aaKnown RBP13.45□□□□□ -0.26
SRMP1-201ENST00000398959 DCP1AQ9NPI6 582 aaPredicted RBP13.45□□□□□ -0.26
SRMP1-201ENST00000398959 PAG1Q9NWQ8 432 aa13.45□□□□□ -0.26
SRMP1-201ENST00000398959 ZMYND8Q9ULU4 1186 aaPredicted RBP13.45□□□□□ -0.26
SRMP1-201ENST00000398959 SMCHD1A6NHR9 2005 aa13.45□□□□□ -0.26
SRMP1-201ENST00000398959 TCRBV5S4A2TA0A5A2 114 aa13.44□□□□□ -0.26
SRMP1-201ENST00000398959 SLC15A5A6NIM6 579 aa13.44□□□□□ -0.26
SRMP1-201ENST00000398959 SPDYE16A6NNV3 312 aaPredicted RBP13.44□□□□□ -0.26
SRMP1-201ENST00000398959 PTPREP23469 700 aa13.44□□□□□ -0.26
SRMP1-201ENST00000398959 GUCY1A2P33402 732 aa13.44□□□□□ -0.26
SRMP1-201ENST00000398959 EVX2Q03828 476 aa13.44□□□□□ -0.26
SRMP1-201ENST00000398959 TANGO6Q9C0B7 1094 aa13.44□□□□□ -0.26
SRMP1-201ENST00000398959 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.44□□□□□ -0.26
SRMP1-201ENST00000398959 ARMT1Q9H993 441 aa13.44□□□□□ -0.26
SRMP1-201ENST00000398959 ZBTB40Q9NUA8 1239 aa13.44□□□□□ -0.26
SRMP1-201ENST00000398959 BTBD7Q9P203 1132 aa13.44□□□□□ -0.26
SRMP1-201ENST00000398959 SWAP70Q9UH65 585 aa13.44□□□□□ -0.26
SRMP1-201ENST00000398959 SYN1P17600 705 aa13.43□□□□□ -0.26
SRMP1-201ENST00000398959 ATP2B2Q01814 1243 aa13.43□□□□□ -0.26
SRMP1-201ENST00000398959 MFSD14CQ5VZR4 134 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms