RNA–Protein interactions for RNA: ENST00000398868.7

ATL3-201, Transcript of atlastin GTPase 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ATL3, Length 7,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-201ENST00000398868 GNAQP50148 359 aa10.39□□□□□ -0.75
ATL3-201ENST00000398868 ADAT2Q7Z6V5 191 aaKnown RBP10.39□□□□□ -0.75
ATL3-201ENST00000398868 PHLDB2Q86SQ0 1253 aa10.39□□□□□ -0.75
ATL3-201ENST00000398868 MRPS27Q92552 414 aaKnown RBP10.39□□□□□ -0.75
ATL3-201ENST00000398868 GPKOWQ92917 476 aaPredicted RBP eCLIP10.39□□□□□ -0.75
ATL3-201ENST00000398868 PGBD1Q96JS3 809 aa10.39□□□□□ -0.75
ATL3-201ENST00000398868 CAPN7Q9Y6W3 813 aa10.39□□□□□ -0.75
ATL3-201ENST00000398868 EIF4G3O43432 1585 aaKnown RBP10.39□□□□□ -0.75
ATL3-201ENST00000398868 RTL9Q8NET4 1388 aa10.39□□□□□ -0.75
ATL3-201ENST00000398868 SEC24BO95487 1268 aa10.39□□□□□ -0.75
ATL3-201ENST00000398868 KANK3Q6NY19 840 aa10.39□□□□□ -0.75
ATL3-201ENST00000398868 TMTC2Q8N394 836 aa10.39□□□□□ -0.75
ATL3-201ENST00000398868 STX10O60499 249 aa10.39□□□□□ -0.75
ATL3-201ENST00000398868 GNA11P29992 359 aa10.39□□□□□ -0.75
ATL3-201ENST00000398868 B4GALNT4Q76KP1 1039 aa10.39□□□□□ -0.75
ATL3-201ENST00000398868 USP37Q86T82 979 aa10.39□□□□□ -0.75
ATL3-201ENST00000398868 DPP9Q86TI2 863 aa10.39□□□□□ -0.75
ATL3-201ENST00000398868 VAV2P52735 878 aa10.39□□□□□ -0.75
ATL3-201ENST00000398868 SPATA5Q8NB90 893 aa10.39□□□□□ -0.75
ATL3-201ENST00000398868 IP6K1Q92551 441 aa10.39□□□□□ -0.75
ATL3-201ENST00000398868 LRRC45Q96CN5 670 aa10.39□□□□□ -0.75
ATL3-201ENST00000398868 SPOPO43791 374 aa10.38□□□□□ -0.75
ATL3-201ENST00000398868 TNNI3KQ59H18 835 aa10.38□□□□□ -0.75
ATL3-201ENST00000398868 KCTD1Q719H9 257 aa10.38□□□□□ -0.75
ATL3-201ENST00000398868 STMN4Q9H169 189 aaPredicted RBP10.38□□□□□ -0.75
ATL3-201ENST00000398868 FPGT-TNNI3KV9GXZ4 949 aa10.38□□□□□ -0.75
ATL3-201ENST00000398868 CASQ2O14958 399 aaPredicted RBP10.38□□□□□ -0.75
ATL3-201ENST00000398868 FLOT1O75955 427 aa10.38□□□□□ -0.75
ATL3-201ENST00000398868 CXorf38Q8TB03 319 aa10.38□□□□□ -0.75
ATL3-201ENST00000398868 ASAP1Q9ULH1 1129 aa10.38□□□□□ -0.75
ATL3-201ENST00000398868 RIPOR2Q9Y4F9 1068 aa10.38□□□□□ -0.75
ATL3-201ENST00000398868 AFG3L2Q9Y4W6 797 aa10.38□□□□□ -0.75
ATL3-201ENST00000398868 SEC23IPQ9Y6Y8 1000 aaKnown RBP10.38□□□□□ -0.75
ATL3-201ENST00000398868 EPB41P11171 864 aaKnown RBP10.38□□□□□ -0.75
ATL3-201ENST00000398868 LIG3P49916 1009 aa10.38□□□□□ -0.75
ATL3-201ENST00000398868 PTPN21Q16825 1174 aa10.38□□□□□ -0.75
ATL3-201ENST00000398868 TTC14Q96N46 770 aa10.38□□□□□ -0.75
ATL3-201ENST00000398868 NOC4LQ9BVI4 516 aaKnown RBP10.38□□□□□ -0.75
ATL3-201ENST00000398868 LRRC27Q9C0I9 530 aa10.38□□□□□ -0.75
ATL3-201ENST00000398868 OPHN1O60890 802 aa10.38□□□□□ -0.75
ATL3-201ENST00000398868 PDE6BP35913 854 aa10.38□□□□□ -0.75
ATL3-201ENST00000398868 OSTNP61366 133 aa10.38□□□□□ -0.75
ATL3-201ENST00000398868 CCDC77Q9BR77 488 aa10.38□□□□□ -0.75
ATL3-201ENST00000398868 KRT86O43790 486 aa10.38□□□□□ -0.75
ATL3-201ENST00000398868 SMTNP53814 917 aa10.38□□□□□ -0.75
ATL3-201ENST00000398868 COG7P83436 770 aa10.38□□□□□ -0.75
ATL3-201ENST00000398868 RUFY3Q7L099 469 aa10.38□□□□□ -0.75
ATL3-201ENST00000398868 CCDC42Q96M95 316 aa10.38□□□□□ -0.75
ATL3-201ENST00000398868 FAM193BQ96PV7 902 aaPredicted RBP10.38□□□□□ -0.75
ATL3-201ENST00000398868 METTL14Q9HCE5 456 aaKnown RBP10.38□□□□□ -0.75
ATL3-201ENST00000398868 YARSP54577 528 aaKnown RBP10.38□□□□□ -0.75
ATL3-201ENST00000398868 PRR16Q569H4 304 aa10.38□□□□□ -0.75
ATL3-201ENST00000398868 IRAK4Q9NWZ3 460 aa10.38□□□□□ -0.75
ATL3-201ENST00000398868 POLA2Q14181 598 aa10.37□□□□□ -0.75
ATL3-201ENST00000398868 NCOA1Q15788 1441 aa10.37□□□□□ -0.75
ATL3-201ENST00000398868 LINS1Q8NG48 757 aa10.37□□□□□ -0.75
ATL3-201ENST00000398868 DACT3Q96B18 629 aaPredicted RBP10.37□□□□□ -0.75
ATL3-201ENST00000398868 YTHDC2Q9H6S0 1430 aaKnown RBP10.37□□□□□ -0.75
ATL3-201ENST00000398868 PNMA6EA0A0J9YXQ4 647 aa10.37□□□□□ -0.75
ATL3-201ENST00000398868 SLC52A2Q9HAB3 445 aa10.37□□□□□ -0.75
ATL3-201ENST00000398868 RABGAP1Q9Y3P9 1069 aa10.37□□□□□ -0.75
ATL3-201ENST00000398868 PRAMEF22A3QJZ6 481 aa10.37□□□□□ -0.75
ATL3-201ENST00000398868 FAM196AQ6ZSG2 479 aa10.37□□□□□ -0.75
ATL3-201ENST00000398868 SNX29Q8TEQ0 813 aa10.37□□□□□ -0.75
ATL3-201ENST00000398868 CCT6BQ92526 530 aa10.37□□□□□ -0.75
ATL3-201ENST00000398868 BAG1Q99933 345 aaPredicted RBP10.37□□□□□ -0.75
ATL3-201ENST00000398868 CARD14Q9BXL6 1004 aa10.37□□□□□ -0.75
ATL3-201ENST00000398868 PCDHB13Q9Y5F0 798 aa10.37□□□□□ -0.75
ATL3-201ENST00000398868 A0A1W2PP64 1363 aa10.37□□□□□ -0.75
ATL3-201ENST00000398868 CCDC172P0C7W6 258 aa10.37□□□□□ -0.75
ATL3-201ENST00000398868 DLATP10515 647 aaKnown RBP10.37□□□□□ -0.75
ATL3-201ENST00000398868 SLC16A2P36021 539 aa10.37□□□□□ -0.75
ATL3-201ENST00000398868 TECP42680 631 aa10.37□□□□□ -0.75
ATL3-201ENST00000398868 ZSCAN26Q16670 478 aa10.37□□□□□ -0.75
ATL3-201ENST00000398868 ZNF496Q96IT1 587 aaPredicted RBP10.37□□□□□ -0.75
ATL3-201ENST00000398868 NBPF3Q9H094 633 aa10.37□□□□□ -0.75
ATL3-201ENST00000398868 ABCC11Q96J66 1382 aa10.37□□□□□ -0.75
ATL3-201ENST00000398868 F13A1P00488 732 aa10.37□□□□□ -0.75
ATL3-201ENST00000398868 MYBP10242 640 aa10.37□□□□□ -0.75
ATL3-201ENST00000398868 CALCRLQ16602 461 aa10.37□□□□□ -0.75
ATL3-201ENST00000398868 TRMT44Q8IYL2 757 aaKnown RBP10.37□□□□□ -0.75
ATL3-201ENST00000398868 RYBPQ8N488 228 aaPredicted RBP10.37□□□□□ -0.75
ATL3-201ENST00000398868 MCUR1Q96AQ8 359 aa10.37□□□□□ -0.75
ATL3-201ENST00000398868 VCX3BQ9H321 246 aa10.37□□□□□ -0.75
ATL3-201ENST00000398868 GNAT2P19087 354 aa10.36□□□□□ -0.75
ATL3-201ENST00000398868 PPFIA1Q13136 1202 aa10.36□□□□□ -0.75
ATL3-201ENST00000398868 SDCCAG8Q86SQ7 713 aaPredicted RBP10.36□□□□□ -0.75
ATL3-201ENST00000398868 KCNG4Q8TDN1 519 aa10.36□□□□□ -0.75
ATL3-201ENST00000398868 ZNF668Q96K58 619 aaPredicted RBP10.36□□□□□ -0.75
ATL3-201ENST00000398868 GBP5Q96PP8 586 aa10.36□□□□□ -0.75
ATL3-201ENST00000398868 BAG2O95816 211 aa10.36□□□□□ -0.75
ATL3-201ENST00000398868 SLC8A3P57103 927 aa10.36□□□□□ -0.75
ATL3-201ENST00000398868 VPS52Q8N1B4 723 aa10.36□□□□□ -0.75
ATL3-201ENST00000398868 ABTB1Q969K4 478 aaPredicted RBP10.36□□□□□ -0.75
ATL3-201ENST00000398868 CTAGE1Q96RT6 745 aa10.36□□□□□ -0.75
ATL3-201ENST00000398868 SRP68Q9UHB9 627 aaKnown RBP10.36□□□□□ -0.75
ATL3-201ENST00000398868 CACNB3P54284 484 aa10.36□□□□□ -0.75
ATL3-201ENST00000398868 PLBD2Q8NHP8 589 aa10.36□□□□□ -0.75
ATL3-201ENST00000398868 ZSCAN16Q9H4T2 348 aaPredicted RBP10.36□□□□□ -0.75
ATL3-201ENST00000398868 XAB2Q9HCS7 855 aaKnown RBP10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 95.7 ms