RNA–Protein interactions for RNA: ENST00000398652.7

FAM3B-204, Transcript of family with sequence similarity 3 member B, humanhuman

TSL 1 (best) BASIC

Gene FAM3B, Length 1,125 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3B-204ENST00000398652 WDR78Q5VTH9 848 aa17.05■□□□□ 0.32
FAM3B-204ENST00000398652 SH3RF1Q7Z6J0 888 aa17.05■□□□□ 0.32
FAM3B-204ENST00000398652 TEX11Q8IYF3 940 aa17.05■□□□□ 0.32
FAM3B-204ENST00000398652 MRPL50Q8N5N7 158 aaKnown RBP17.05■□□□□ 0.32
FAM3B-204ENST00000398652 TRIM43Q96BQ3 446 aaPredicted RBP17.05■□□□□ 0.32
FAM3B-204ENST00000398652 NSUN4Q96CB9 384 aaKnown RBP17.05■□□□□ 0.32
FAM3B-204ENST00000398652 EMILIN3Q9NT22 766 aa17.05■□□□□ 0.32
FAM3B-204ENST00000398652 ZBTB21Q9ULJ3 1066 aa17.05■□□□□ 0.32
FAM3B-204ENST00000398652 IGHA2P01877 340 aa17.04■□□□□ 0.32
FAM3B-204ENST00000398652 C1orf53Q5VUE5 145 aa17.04■□□□□ 0.32
FAM3B-204ENST00000398652 USP17L2Q6R6M4 530 aa17.04■□□□□ 0.32
FAM3B-204ENST00000398652 NPLOC4Q8TAT6 608 aa17.04■□□□□ 0.32
FAM3B-204ENST00000398652 ATXN2LQ8WWM7 1075 aaKnown RBP17.04■□□□□ 0.32
FAM3B-204ENST00000398652 DNAJC18Q9H819 358 aa17.04■□□□□ 0.32
FAM3B-204ENST00000398652 IVNS1ABPQ9Y6Y0 642 aa17.04■□□□□ 0.32
FAM3B-204ENST00000398652 PLXNA1Q9UIW2 1896 aa17.03■□□□□ 0.32
FAM3B-204ENST00000398652 GDF11O95390 407 aa17.03■□□□□ 0.32
FAM3B-204ENST00000398652 DNAJB2P25686 324 aa17.03■□□□□ 0.32
FAM3B-204ENST00000398652 SHROOM1Q2M3G4 852 aaPredicted RBP17.03■□□□□ 0.32
FAM3B-204ENST00000398652 MYH1P12882 1939 aa17.02■□□□□ 0.32
FAM3B-204ENST00000398652 TIMM10P62072 90 aa17.02■□□□□ 0.32
FAM3B-204ENST00000398652 MAP3K12Q12852 859 aa17.02■□□□□ 0.32
FAM3B-204ENST00000398652 MVPQ14764 893 aaKnown RBP17.02■□□□□ 0.32
FAM3B-204ENST00000398652 METTL16Q86W50 562 aaKnown RBP17.02■□□□□ 0.32
FAM3B-204ENST00000398652 FOXP4Q8IVH2 680 aaPredicted RBP17.02■□□□□ 0.32
FAM3B-204ENST00000398652 MIER1Q8N108 512 aa17.02■□□□□ 0.32
FAM3B-204ENST00000398652 PLCD3Q8N3E9 789 aa17.02■□□□□ 0.32
FAM3B-204ENST00000398652 ADAMTS19Q8TE59 1207 aa17.02■□□□□ 0.32
FAM3B-204ENST00000398652 SH3RF3Q8TEJ3 882 aaPredicted RBP17.02■□□□□ 0.32
FAM3B-204ENST00000398652 C12orf42Q96LP6 360 aa17.02■□□□□ 0.32
FAM3B-204ENST00000398652 TRIM34Q9BYJ4 488 aa17.02■□□□□ 0.32
FAM3B-204ENST00000398652 ZNF576Q9H609 170 aa17.02■□□□□ 0.32
FAM3B-204ENST00000398652 THEGQ9P2T0 379 aa17.02■□□□□ 0.32
FAM3B-204ENST00000398652 SMCHD1A6NHR9 2005 aa17.02■□□□□ 0.32
FAM3B-204ENST00000398652 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.01■□□□□ 0.31
FAM3B-204ENST00000398652 A0A1B0GUL7 405 aa17.01■□□□□ 0.31
FAM3B-204ENST00000398652 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.01■□□□□ 0.31
FAM3B-204ENST00000398652 USP17L15C9J2P7 530 aa17.01■□□□□ 0.31
FAM3B-204ENST00000398652 USP17L13C9JLJ4 530 aa17.01■□□□□ 0.31
FAM3B-204ENST00000398652 USP17L11C9JVI0 530 aa17.01■□□□□ 0.31
FAM3B-204ENST00000398652 USP17L18D6R9N7 530 aa17.01■□□□□ 0.31
FAM3B-204ENST00000398652 USP17L22D6RA61 530 aa17.01■□□□□ 0.31
FAM3B-204ENST00000398652 USP17L17D6RBQ6 530 aa17.01■□□□□ 0.31
FAM3B-204ENST00000398652 USP17L19D6RCP7 530 aa17.01■□□□□ 0.31
FAM3B-204ENST00000398652 USP17L20D6RJB6 530 aa17.01■□□□□ 0.31
FAM3B-204ENST00000398652 ADCYAP1R1P41586 468 aa17.01■□□□□ 0.31
FAM3B-204ENST00000398652 EPHB4P54760 987 aa17.01■□□□□ 0.31
FAM3B-204ENST00000398652 TLE2Q04725 743 aa17.01■□□□□ 0.31
FAM3B-204ENST00000398652 USP17L24Q0WX57 530 aa17.01■□□□□ 0.31
FAM3B-204ENST00000398652 CRACR2BQ8N4Y2 399 aaPredicted RBP17.01■□□□□ 0.31
FAM3B-204ENST00000398652 XAGE2Q96GT9 111 aa17.01■□□□□ 0.31
FAM3B-204ENST00000398652 ASB2Q96Q27 587 aa17.01■□□□□ 0.31
FAM3B-204ENST00000398652 COPRSQ9NQ92 184 aa17.01■□□□□ 0.31
FAM3B-204ENST00000398652 RAI14Q9P0K7 980 aa17.01■□□□□ 0.31
FAM3B-204ENST00000398652 HMG20BQ9P0W2 317 aa17.01■□□□□ 0.31
FAM3B-204ENST00000398652 PA2G4Q9UQ80 394 aaKnown RBP17.01■□□□□ 0.31
FAM3B-204ENST00000398652 TACC3Q9Y6A5 838 aa17.01■□□□□ 0.31
FAM3B-204ENST00000398652 SEPT4O43236 478 aa17■□□□□ 0.31
FAM3B-204ENST00000398652 UBTFL1P0CB47 393 aaPredicted RBP17■□□□□ 0.31
FAM3B-204ENST00000398652 ITGB8P26012 769 aa17■□□□□ 0.31
FAM3B-204ENST00000398652 ANO1Q5XXA6 986 aa17■□□□□ 0.31
FAM3B-204ENST00000398652 OLFML2BQ68BL8 750 aa17■□□□□ 0.31
FAM3B-204ENST00000398652 LBX2Q6XYB7 198 aa17■□□□□ 0.31
FAM3B-204ENST00000398652 TBC1D9Q6ZT07 1266 aa17■□□□□ 0.31
FAM3B-204ENST00000398652 SPATA5Q8NB90 893 aa17■□□□□ 0.31
FAM3B-204ENST00000398652 FERMT2Q96AC1 680 aa17■□□□□ 0.31
FAM3B-204ENST00000398652 NOL10Q9BSC4 688 aaKnown RBP17■□□□□ 0.31
FAM3B-204ENST00000398652 ZNFX1Q9P2E3 1918 aaKnown RBP17■□□□□ 0.31
FAM3B-204ENST00000398652 A0A0G2JMZ2 1700 aa16.99■□□□□ 0.31
FAM3B-204ENST00000398652 TCF20Q9UGU0 1960 aaKnown RBP16.99■□□□□ 0.31
FAM3B-204ENST00000398652 CLTBP09497 229 aa16.99■□□□□ 0.31
FAM3B-204ENST00000398652 FPGSQ05932 587 aa16.99■□□□□ 0.31
FAM3B-204ENST00000398652 LRRC41Q15345 812 aa16.99■□□□□ 0.31
FAM3B-204ENST00000398652 AKNAD1Q5T1N1 836 aa16.99■□□□□ 0.31
FAM3B-204ENST00000398652 PI16Q6UXB8 463 aa16.99■□□□□ 0.31
FAM3B-204ENST00000398652 CATSPERGQ6ZRH7 1159 aa16.99■□□□□ 0.31
FAM3B-204ENST00000398652 TIFAQ96CG3 184 aa16.99■□□□□ 0.31
FAM3B-204ENST00000398652 UHRF1Q96T88 793 aaPredicted RBP16.99■□□□□ 0.31
FAM3B-204ENST00000398652 GAS2L1Q99501 681 aaPredicted RBP16.99■□□□□ 0.31
FAM3B-204ENST00000398652 FEZ1Q99689 392 aa16.99■□□□□ 0.31
FAM3B-204ENST00000398652 BTBD7Q9P203 1132 aa16.99■□□□□ 0.31
FAM3B-204ENST00000398652 AKAP2Q9Y2D5 859 aa16.99■□□□□ 0.31
FAM3B-204ENST00000398652 MYO5AQ9Y4I1 1855 aaKnown RBP16.99■□□□□ 0.31
FAM3B-204ENST00000398652 FLT1P17948 1338 aa16.98■□□□□ 0.31
FAM3B-204ENST00000398652 KIAA0355O15063 1070 aa16.98■□□□□ 0.31
FAM3B-204ENST00000398652 RAG1P15918 1043 aa16.98■□□□□ 0.31
FAM3B-204ENST00000398652 PLCG2P16885 1265 aa16.98■□□□□ 0.31
FAM3B-204ENST00000398652 ZYXQ15942 572 aaKnown RBP16.98■□□□□ 0.31
FAM3B-204ENST00000398652 DPP9Q86TI2 863 aa16.98■□□□□ 0.31
FAM3B-204ENST00000398652 MAPKAPK5Q8IW41 473 aa16.98■□□□□ 0.31
FAM3B-204ENST00000398652 PPM1EQ8WY54 764 aa16.98■□□□□ 0.31
FAM3B-204ENST00000398652 BAG3O95817 575 aa16.97■□□□□ 0.31
FAM3B-204ENST00000398652 USP14P54578 494 aa16.97■□□□□ 0.31
FAM3B-204ENST00000398652 MRPS5P82675 430 aaKnown RBP16.97■□□□□ 0.31
FAM3B-204ENST00000398652 TGFBRAP1Q8WUH2 860 aa16.97■□□□□ 0.31
FAM3B-204ENST00000398652 AATFQ9NY61 560 aaKnown RBP eCLIP16.97■□□□□ 0.31
FAM3B-204ENST00000398652 PALD1Q9ULE6 856 aa16.97■□□□□ 0.31
FAM3B-204ENST00000398652 PHF24Q9UPV7 400 aa16.97■□□□□ 0.31
FAM3B-204ENST00000398652 GBF1Q92538 1859 aa16.97■□□□□ 0.31
FAM3B-204ENST00000398652 SPDYE16A6NNV3 312 aaPredicted RBP16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms