RNA–Protein interactions for RNA: ENST00000398488.5

MBD1-207, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best) BASIC

Gene MBD1, Length 1,512 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-207ENST00000398488 GADL1Q6ZQY3 521 aa18.75■□□□□ 0.59
MBD1-207ENST00000398488 TMEM179Q6ZVK1 233 aa18.75■□□□□ 0.59
MBD1-207ENST00000398488 CCDC17Q96LX7 622 aa18.75■□□□□ 0.59
MBD1-207ENST00000398488 EMILIN3Q9NT22 766 aa18.75■□□□□ 0.59
MBD1-207ENST00000398488 IGKV6D-41A0A0C4DH26 115 aa18.74■□□□□ 0.59
MBD1-207ENST00000398488 ZYXQ15942 572 aaKnown RBP18.74■□□□□ 0.59
MBD1-207ENST00000398488 SH3D19Q5HYK7 790 aa18.74■□□□□ 0.59
MBD1-207ENST00000398488 AS3MTQ9HBK9 375 aa18.74■□□□□ 0.59
MBD1-207ENST00000398488 USP17L10C9JJH3 530 aa18.74■□□□□ 0.59
MBD1-207ENST00000398488 TFAP4Q01664 338 aa18.74■□□□□ 0.59
MBD1-207ENST00000398488 MAP4K1Q92918 833 aa18.74■□□□□ 0.59
MBD1-207ENST00000398488 NEDD4P46934 1319 aa18.73■□□□□ 0.59
MBD1-207ENST00000398488 PDHXO00330 501 aa18.73■□□□□ 0.59
MBD1-207ENST00000398488 ZNF213O14771 459 aa18.73■□□□□ 0.59
MBD1-207ENST00000398488 NMT2O60551 498 aa18.73■□□□□ 0.59
MBD1-207ENST00000398488 LBX1P52954 281 aa18.73■□□□□ 0.59
MBD1-207ENST00000398488 PDE4BQ07343 736 aa18.73■□□□□ 0.59
MBD1-207ENST00000398488 CRHR2Q13324 411 aa18.73■□□□□ 0.59
MBD1-207ENST00000398488 ANKRD23Q86SG2 305 aa18.73■□□□□ 0.59
MBD1-207ENST00000398488 ZNF444Q8N0Y2 327 aaPredicted RBP18.73■□□□□ 0.59
MBD1-207ENST00000398488 BEGAINQ9BUH8 593 aa18.73■□□□□ 0.59
MBD1-207ENST00000398488 TBC1D2Q9BYX2 928 aa18.73■□□□□ 0.59
MBD1-207ENST00000398488 SAGE1Q9NXZ1 904 aa18.73■□□□□ 0.59
MBD1-207ENST00000398488 LAMA4Q16363 1823 aa18.73■□□□□ 0.59
MBD1-207ENST00000398488 LOC285556D6RIA3 1793 aa18.73■□□□□ 0.59
MBD1-207ENST00000398488 ORC4O43929 436 aa18.72■□□□□ 0.59
MBD1-207ENST00000398488 SLC3A2P08195 630 aaKnown RBP18.72■□□□□ 0.59
MBD1-207ENST00000398488 CYP21A2P08686 494 aa18.72■□□□□ 0.59
MBD1-207ENST00000398488 EEF2P13639 858 aaKnown RBP18.72■□□□□ 0.59
MBD1-207ENST00000398488 ICA1Q05084 483 aa18.72■□□□□ 0.59
MBD1-207ENST00000398488 AKNAD1Q5T1N1 836 aa18.72■□□□□ 0.59
MBD1-207ENST00000398488 NEDD1Q8NHV4 660 aa18.72■□□□□ 0.59
MBD1-207ENST00000398488 STAG1Q8WVM7 1258 aa18.72■□□□□ 0.59
MBD1-207ENST00000398488 IL17RBQ9NRM6 502 aa18.72■□□□□ 0.59
MBD1-207ENST00000398488 CYP2C8P10632 490 aa18.71■□□□□ 0.59
MBD1-207ENST00000398488 RRP12Q5JTH9 1297 aaKnown RBP18.71■□□□□ 0.59
MBD1-207ENST00000398488 FASTKD5Q7L8L6 764 aaKnown RBP18.71■□□□□ 0.59
MBD1-207ENST00000398488 CEP95Q96GE4 821 aa18.71■□□□□ 0.59
MBD1-207ENST00000398488 KIAA1683Q9H0B3 1180 aa18.71■□□□□ 0.59
MBD1-207ENST00000398488 RBM8AQ9Y5S9 174 aaKnown RBP18.71■□□□□ 0.59
MBD1-207ENST00000398488 CA12O43570 354 aa18.7■□□□□ 0.58
MBD1-207ENST00000398488 RANBP6O60518 1105 aaKnown RBP18.7■□□□□ 0.58
MBD1-207ENST00000398488 ATP2B2Q01814 1243 aa18.7■□□□□ 0.58
MBD1-207ENST00000398488 COL9A3Q14050 684 aaPredicted RBP18.7■□□□□ 0.58
MBD1-207ENST00000398488 TAF1CQ15572 869 aaPredicted RBP18.7■□□□□ 0.58
MBD1-207ENST00000398488 PROCA1Q8NCQ7 364 aaPredicted RBP18.7■□□□□ 0.58
MBD1-207ENST00000398488 CFHR5Q9BXR6 569 aa18.7■□□□□ 0.58
MBD1-207ENST00000398488 KANSL2Q9H9L4 492 aa18.7■□□□□ 0.58
MBD1-207ENST00000398488 CTNNA3Q9UI47 895 aa18.7■□□□□ 0.58
MBD1-207ENST00000398488 AGTPBP1Q9UPW5 1226 aa18.7■□□□□ 0.58
MBD1-207ENST00000398488 GTF3C3Q9Y5Q9 886 aa18.7■□□□□ 0.58
MBD1-207ENST00000398488 PLIN4Q96Q06 1357 aa18.7■□□□□ 0.58
MBD1-207ENST00000398488 C19orf81C9J6K1 198 aa18.69■□□□□ 0.58
MBD1-207ENST00000398488 TSPY3P0CV98 308 aa18.69■□□□□ 0.58
MBD1-207ENST00000398488 TSPY8P0CW00 308 aa18.69■□□□□ 0.58
MBD1-207ENST00000398488 CTCFP49711 727 aaPredicted RBP18.69■□□□□ 0.58
MBD1-207ENST00000398488 CAP1Q01518 475 aa18.69■□□□□ 0.58
MBD1-207ENST00000398488 USP17L2Q6R6M4 530 aa18.69■□□□□ 0.58
MBD1-207ENST00000398488 STOX1Q6ZVD7 989 aa18.69■□□□□ 0.58
MBD1-207ENST00000398488 FEZ1Q99689 392 aa18.69■□□□□ 0.58
MBD1-207ENST00000398488 ZNF287Q9HBT7 754 aa18.69■□□□□ 0.58
MBD1-207ENST00000398488 ANO2Q9NQ90 1003 aa18.69■□□□□ 0.58
MBD1-207ENST00000398488 TOMM22Q9NS69 142 aa18.69■□□□□ 0.58
MBD1-207ENST00000398488 MTMR4Q9NYA4 1195 aa18.69■□□□□ 0.58
MBD1-207ENST00000398488 TMX2Q9Y320 296 aa18.69■□□□□ 0.58
MBD1-207ENST00000398488 U3KPZ7 1027 aaPredicted RBP18.69■□□□□ 0.58
MBD1-207ENST00000398488 ADGRA2Q96PE1 1338 aa18.69■□□□□ 0.58
MBD1-207ENST00000398488 ALDH1A1P00352 501 aa18.69■□□□□ 0.58
MBD1-207ENST00000398488 IMMTQ16891 758 aaKnown RBP18.69■□□□□ 0.58
MBD1-207ENST00000398488 OTUD7BQ6GQQ9 843 aa18.69■□□□□ 0.58
MBD1-207ENST00000398488 POTEEQ6S8J3 1075 aa18.69■□□□□ 0.58
MBD1-207ENST00000398488 MFSD6Q6ZSS7 791 aa18.69■□□□□ 0.58
MBD1-207ENST00000398488 C12orf42Q96LP6 360 aa18.69■□□□□ 0.58
MBD1-207ENST00000398488 CLIP2Q9UDT6 1046 aa18.69■□□□□ 0.58
MBD1-207ENST00000398488 TSPY2A6NKD2 308 aa18.68■□□□□ 0.58
MBD1-207ENST00000398488 PEX10O60683 326 aa18.68■□□□□ 0.58
MBD1-207ENST00000398488 ZCCHC17Q9NP64 241 aaKnown RBP18.68■□□□□ 0.58
MBD1-207ENST00000398488 TMOD4Q9NZQ9 345 aa18.68■□□□□ 0.58
MBD1-207ENST00000398488 NYAP2Q9P242 653 aa18.68■□□□□ 0.58
MBD1-207ENST00000398488 B4E1Z4 1266 aa18.67■□□□□ 0.58
MBD1-207ENST00000398488 GPR25O00155 361 aa18.67■□□□□ 0.58
MBD1-207ENST00000398488 VCAM1P19320 739 aa18.67■□□□□ 0.58
MBD1-207ENST00000398488 NECTIN1Q15223 517 aa18.67■□□□□ 0.58
MBD1-207ENST00000398488 KIAA1211Q6ZU35 1233 aa18.67■□□□□ 0.58
MBD1-207ENST00000398488 SPICE1Q8N0Z3 855 aa18.67■□□□□ 0.58
MBD1-207ENST00000398488 LRRC47Q8N1G4 583 aaKnown RBP18.67■□□□□ 0.58
MBD1-207ENST00000398488 ARHGEF10LQ9HCE6 1279 aa18.67■□□□□ 0.58
MBD1-207ENST00000398488 CPA4Q9UI42 421 aa18.67■□□□□ 0.58
MBD1-207ENST00000398488 CASP8AP2Q9UKL3 1982 aa18.66■□□□□ 0.58
MBD1-207ENST00000398488 SLC27A2O14975 620 aa18.66■□□□□ 0.58
MBD1-207ENST00000398488 KDM4AO75164 1064 aa18.66■□□□□ 0.58
MBD1-207ENST00000398488 NOVP48745 357 aa18.66■□□□□ 0.58
MBD1-207ENST00000398488 ZNF296Q8WUU4 475 aaPredicted RBP18.66■□□□□ 0.58
MBD1-207ENST00000398488 P2RX7Q99572 595 aaKnown RBP18.66■□□□□ 0.58
MBD1-207ENST00000398488 ZKSCAN3Q9BRR0 538 aa18.66■□□□□ 0.58
MBD1-207ENST00000398488 ASCC2Q9H1I8 757 aaPredicted RBP18.66■□□□□ 0.58
MBD1-207ENST00000398488 VCPKMTQ9H867 229 aa18.66■□□□□ 0.58
MBD1-207ENST00000398488 ZFYVE28Q9HCC9 887 aa18.66■□□□□ 0.58
MBD1-207ENST00000398488 SLC45A1Q9Y2W3 748 aa18.66■□□□□ 0.58
MBD1-207ENST00000398488 TLR2O60603 784 aa18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms