RNA–Protein interactions for RNA: ENST00000397901.7

CHMP1A-201, Transcript of charged multivesicular body protein 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP1A, Length 2,483 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-201ENST00000397901 FBXO2Q9UK22 296 aaPredicted RBP18.15■□□□□ 0.5
CHMP1A-201ENST00000397901 ANKRD18BA2A2Z9 1011 aa18.14■□□□□ 0.5
CHMP1A-201ENST00000397901 MMP1P03956 469 aa18.14■□□□□ 0.5
CHMP1A-201ENST00000397901 HDXQ7Z353 690 aa18.14■□□□□ 0.5
CHMP1A-201ENST00000397901 NAPBQ9H115 298 aa18.14■□□□□ 0.5
CHMP1A-201ENST00000397901 CXorf56Q9H5V9 222 aa18.14■□□□□ 0.5
CHMP1A-201ENST00000397901 PDE11AQ9HCR9 933 aa18.14■□□□□ 0.5
CHMP1A-201ENST00000397901 ANKRD36CQ5JPF3 1778 aa18.14■□□□□ 0.49
CHMP1A-201ENST00000397901 TCRBV5S4A2TA0A5A2 114 aa18.14■□□□□ 0.49
CHMP1A-201ENST00000397901 MBD4O95243 580 aa18.14■□□□□ 0.49
CHMP1A-201ENST00000397901 ZNF18P17022 549 aa18.14■□□□□ 0.49
CHMP1A-201ENST00000397901 NR5A1Q13285 461 aa18.14■□□□□ 0.49
CHMP1A-201ENST00000397901 SEC31BQ9NQW1 1179 aa18.14■□□□□ 0.49
CHMP1A-201ENST00000397901 PCDHB6Q9Y5E3 794 aa18.14■□□□□ 0.49
CHMP1A-201ENST00000397901 STX10O60499 249 aa18.13■□□□□ 0.49
CHMP1A-201ENST00000397901 MTF1Q14872 753 aa18.13■□□□□ 0.49
CHMP1A-201ENST00000397901 USP49Q70CQ1 688 aa18.13■□□□□ 0.49
CHMP1A-201ENST00000397901 IFNL3Q8IZI9 196 aa18.13■□□□□ 0.49
CHMP1A-201ENST00000397901 VGLL2Q8N8G2 317 aa18.13■□□□□ 0.49
CHMP1A-201ENST00000397901 MED15Q96RN5 788 aa18.13■□□□□ 0.49
CHMP1A-201ENST00000397901 ARMT1Q9H993 441 aa18.13■□□□□ 0.49
CHMP1A-201ENST00000397901 DONSONQ9NYP3 566 aa18.13■□□□□ 0.49
CHMP1A-201ENST00000397901 STK36Q9NRP7 1315 aa18.13■□□□□ 0.49
CHMP1A-201ENST00000397901 KAT6BQ8WYB5 2073 aa18.13■□□□□ 0.49
CHMP1A-201ENST00000397901 GOLGA6L9A6NEM1 432 aa18.13■□□□□ 0.49
CHMP1A-201ENST00000397901 PTPREP23469 700 aa18.13■□□□□ 0.49
CHMP1A-201ENST00000397901 CTSWP56202 376 aa18.13■□□□□ 0.49
CHMP1A-201ENST00000397901 MAGEB6Q8N7X4 407 aa18.13■□□□□ 0.49
CHMP1A-201ENST00000397901 DOT1LQ8TEK3 1739 aa18.12■□□□□ 0.49
CHMP1A-201ENST00000397901 CDHR2Q9BYE9 1310 aa18.12■□□□□ 0.49
CHMP1A-201ENST00000397901 PDE8BO95263 885 aa18.12■□□□□ 0.49
CHMP1A-201ENST00000397901 IFNAR1P17181 557 aa18.12■□□□□ 0.49
CHMP1A-201ENST00000397901 LIFRP42702 1097 aa18.12■□□□□ 0.49
CHMP1A-201ENST00000397901 MORC3Q14149 939 aa18.12■□□□□ 0.49
CHMP1A-201ENST00000397901 E2F4Q16254 413 aa18.12■□□□□ 0.49
CHMP1A-201ENST00000397901 MLKLQ8NB16 471 aa18.12■□□□□ 0.49
CHMP1A-201ENST00000397901 ENOX1Q8TC92 643 aaKnown RBP18.12■□□□□ 0.49
CHMP1A-201ENST00000397901 RAI14Q9P0K7 980 aa18.12■□□□□ 0.49
CHMP1A-201ENST00000397901 RTN1Q16799 776 aa18.12■□□□□ 0.49
CHMP1A-201ENST00000397901 NLRP10Q86W26 655 aa18.12■□□□□ 0.49
CHMP1A-201ENST00000397901 WASF1Q92558 559 aa18.12■□□□□ 0.49
CHMP1A-201ENST00000397901 KIFC2Q96AC6 838 aa18.12■□□□□ 0.49
CHMP1A-201ENST00000397901 DHX58Q96C10 678 aa18.12■□□□□ 0.49
CHMP1A-201ENST00000397901 ZNF512BQ96KM6 892 aaPredicted RBP18.12■□□□□ 0.49
CHMP1A-201ENST00000397901 IRX2Q9BZI1 471 aaPredicted RBP18.12■□□□□ 0.49
CHMP1A-201ENST00000397901 DACH1Q9UI36 760 aa18.12■□□□□ 0.49
CHMP1A-201ENST00000397901 ZBTB1Q9Y2K1 713 aa18.12■□□□□ 0.49
CHMP1A-201ENST00000397901 SNAP23O00161 211 aa18.11■□□□□ 0.49
CHMP1A-201ENST00000397901 IRS4O14654 1257 aaPredicted RBP18.11■□□□□ 0.49
CHMP1A-201ENST00000397901 PRKAB2O43741 272 aa18.11■□□□□ 0.49
CHMP1A-201ENST00000397901 LRRC31Q6UY01 552 aa18.11■□□□□ 0.49
CHMP1A-201ENST00000397901 TRIM22Q8IYM9 498 aa18.11■□□□□ 0.49
CHMP1A-201ENST00000397901 OXER1Q8TDS5 423 aa18.11■□□□□ 0.49
CHMP1A-201ENST00000397901 MRPL44Q9H9J2 332 aaKnown RBP18.11■□□□□ 0.49
CHMP1A-201ENST00000397901 NUP98P52948 1817 aa18.11■□□□□ 0.49
CHMP1A-201ENST00000397901 NRAPQ86VF7 1730 aa18.11■□□□□ 0.49
CHMP1A-201ENST00000397901 A0A087WUV0 522 aaPredicted RBP18.11■□□□□ 0.49
CHMP1A-201ENST00000397901 PATL2C9JE40 543 aaKnown RBP18.11■□□□□ 0.49
CHMP1A-201ENST00000397901 KIF1CO43896 1103 aaKnown RBP18.11■□□□□ 0.49
CHMP1A-201ENST00000397901 SARSP49591 514 aaKnown RBP18.11■□□□□ 0.49
CHMP1A-201ENST00000397901 TADA2BQ86TJ2 420 aa18.11■□□□□ 0.49
CHMP1A-201ENST00000397901 CCDC12Q8WUD4 166 aaPredicted RBP18.11■□□□□ 0.49
CHMP1A-201ENST00000397901 ZSWIM4Q9H7M6 989 aa18.11■□□□□ 0.49
CHMP1A-201ENST00000397901 SOWAHDA6NJG2 315 aa18.1■□□□□ 0.49
CHMP1A-201ENST00000397901 POTEB2H3BUK9 544 aa18.1■□□□□ 0.49
CHMP1A-201ENST00000397901 MCM6Q14566 821 aa18.1■□□□□ 0.49
CHMP1A-201ENST00000397901 RILPL1Q5EBL4 403 aa18.1■□□□□ 0.49
CHMP1A-201ENST00000397901 BEND6Q5SZJ8 279 aaPredicted RBP18.1■□□□□ 0.49
CHMP1A-201ENST00000397901 AKNAD1Q5T1N1 836 aa18.1■□□□□ 0.49
CHMP1A-201ENST00000397901 NT5DC1Q5TFE4 455 aa18.1■□□□□ 0.49
CHMP1A-201ENST00000397901 KLHL10Q6JEL2 608 aa18.1■□□□□ 0.49
CHMP1A-201ENST00000397901 MFSD6Q6ZSS7 791 aa18.1■□□□□ 0.49
CHMP1A-201ENST00000397901 NUTM2AQ8IVF1 878 aaPredicted RBP18.1■□□□□ 0.49
CHMP1A-201ENST00000397901 NUP133Q8WUM0 1156 aa18.1■□□□□ 0.49
CHMP1A-201ENST00000397901 FAN1Q9Y2M0 1017 aa18.1■□□□□ 0.49
CHMP1A-201ENST00000397901 TEX33O43247 280 aa18.1■□□□□ 0.49
CHMP1A-201ENST00000397901 ACTN4O43707 911 aaKnown RBP18.1■□□□□ 0.49
CHMP1A-201ENST00000397901 ARID4AP29374 1257 aaPredicted RBP18.1■□□□□ 0.49
CHMP1A-201ENST00000397901 STX17P56962 302 aa18.1■□□□□ 0.49
CHMP1A-201ENST00000397901 CPLX3Q8WVH0 158 aa18.1■□□□□ 0.49
CHMP1A-201ENST00000397901 FAM107BQ9H098 131 aa18.1■□□□□ 0.49
CHMP1A-201ENST00000397901 CSRNP2Q9H175 543 aa18.1■□□□□ 0.49
CHMP1A-201ENST00000397901 LZTFL1Q9NQ48 299 aa18.1■□□□□ 0.49
CHMP1A-201ENST00000397901 TRMT112Q9UI30 125 aaKnown RBP18.1■□□□□ 0.49
CHMP1A-201ENST00000397901 PPFIA4O75335 1185 aa18.09■□□□□ 0.49
CHMP1A-201ENST00000397901 ERLIN1O75477 346 aa18.09■□□□□ 0.49
CHMP1A-201ENST00000397901 USP5P45974 858 aa18.09■□□□□ 0.49
CHMP1A-201ENST00000397901 WTAPQ15007 396 aa18.09■□□□□ 0.49
CHMP1A-201ENST00000397901 ALX1Q15699 326 aa18.09■□□□□ 0.49
CHMP1A-201ENST00000397901 ELOA2Q8IYF1 753 aaPredicted RBP18.09■□□□□ 0.49
CHMP1A-201ENST00000397901 CABP5Q9NP86 173 aa18.09■□□□□ 0.49
CHMP1A-201ENST00000397901 MYH3P11055 1940 aa18.09■□□□□ 0.49
CHMP1A-201ENST00000397901 A0A0U1RQJ8 604 aa18.09■□□□□ 0.49
CHMP1A-201ENST00000397901 UQCRFS1P1P0C7P4 283 aa18.09■□□□□ 0.49
CHMP1A-201ENST00000397901 CASP1P29466 404 aa18.09■□□□□ 0.49
CHMP1A-201ENST00000397901 TDO2P48775 406 aa18.09■□□□□ 0.49
CHMP1A-201ENST00000397901 PLCD1P51178 756 aa18.09■□□□□ 0.49
CHMP1A-201ENST00000397901 NR1I3Q14994 352 aa18.09■□□□□ 0.49
CHMP1A-201ENST00000397901 SPATA5Q8NB90 893 aa18.09■□□□□ 0.49
CHMP1A-201ENST00000397901 FAM71BQ8TC56 605 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms