RNA–Protein interactions for RNA: ENST00000397761.6

PDLIM2-205, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PDLIM2, Length 1,491 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-205ENST00000397761 FANCBQ8NB91 859 aa22.76■■□□□ 1.23
PDLIM2-205ENST00000397761 TRPM4Q8TD43 1214 aa22.76■■□□□ 1.23
PDLIM2-205ENST00000397761 L3MBTL3Q96JM7 780 aaPredicted RBP22.76■■□□□ 1.23
PDLIM2-205ENST00000397761 MAP3K14Q99558 947 aa22.76■■□□□ 1.23
PDLIM2-205ENST00000397761 TMEM39BQ9GZU3 492 aa22.76■■□□□ 1.23
PDLIM2-205ENST00000397761 TCHHQ07283 1943 aa22.76■■□□□ 1.23
PDLIM2-205ENST00000397761 PTPDC1A2A3K4 754 aa22.75■■□□□ 1.23
PDLIM2-205ENST00000397761 BRD1O95696 1058 aa22.75■■□□□ 1.23
PDLIM2-205ENST00000397761 SLURP2P0DP57 97 aa22.75■■□□□ 1.23
PDLIM2-205ENST00000397761 RXRAP19793 462 aa22.75■■□□□ 1.23
PDLIM2-205ENST00000397761 SYT1P21579 422 aa22.75■■□□□ 1.23
PDLIM2-205ENST00000397761 CEP95Q96GE4 821 aa22.75■■□□□ 1.23
PDLIM2-205ENST00000397761 TEPSINQ96N21 525 aa22.75■■□□□ 1.23
PDLIM2-205ENST00000397761 HACL1Q9UJ83 578 aa22.75■■□□□ 1.23
PDLIM2-205ENST00000397761 ASTN2O75129 1339 aaPredicted RBP22.75■■□□□ 1.23
PDLIM2-205ENST00000397761 WDR90Q96KV7 1748 aa22.75■■□□□ 1.23
PDLIM2-205ENST00000397761 CCDC196A0A1B0GTZ2 297 aa22.74■■□□□ 1.23
PDLIM2-205ENST00000397761 PDCP20941 246 aa22.74■■□□□ 1.23
PDLIM2-205ENST00000397761 ADD1P35611 737 aaKnown RBP22.74■■□□□ 1.23
PDLIM2-205ENST00000397761 RASA3Q14644 834 aa22.74■■□□□ 1.23
PDLIM2-205ENST00000397761 RTN1Q16799 776 aa22.74■■□□□ 1.23
PDLIM2-205ENST00000397761 MTMR4Q9NYA4 1195 aa22.74■■□□□ 1.23
PDLIM2-205ENST00000397761 MYH15Q9Y2K3 1946 aa22.74■■□□□ 1.23
PDLIM2-205ENST00000397761 FAM196BA6NMK8 535 aa22.73■■□□□ 1.23
PDLIM2-205ENST00000397761 CPLX1O14810 134 aa22.73■■□□□ 1.23
PDLIM2-205ENST00000397761 CDKL5O76039 1030 aa22.73■■□□□ 1.23
PDLIM2-205ENST00000397761 FDPSP14324 419 aaKnown RBP22.73■■□□□ 1.23
PDLIM2-205ENST00000397761 HIRAP54198 1017 aaPredicted RBP22.73■■□□□ 1.23
PDLIM2-205ENST00000397761 CERKLQ49MI3 558 aaPredicted RBP22.73■■□□□ 1.23
PDLIM2-205ENST00000397761 PNMA1Q8ND90 353 aa22.73■■□□□ 1.23
PDLIM2-205ENST00000397761 TMEM47Q9BQJ4 181 aa22.73■■□□□ 1.23
PDLIM2-205ENST00000397761 TRIM34Q9BYJ4 488 aa22.73■■□□□ 1.23
PDLIM2-205ENST00000397761 KAT14Q9H8E8 782 aa22.73■■□□□ 1.23
PDLIM2-205ENST00000397761 BAZ2BQ9UIF8 2168 aaKnown RBP22.73■■□□□ 1.23
PDLIM2-205ENST00000397761 DTNBO60941 627 aa22.73■■□□□ 1.23
PDLIM2-205ENST00000397761 IFNAR1P17181 557 aa22.73■■□□□ 1.23
PDLIM2-205ENST00000397761 PPP4R3BQ5MIZ7 849 aa22.73■■□□□ 1.23
PDLIM2-205ENST00000397761 CPLX2Q6PUV4 134 aaKnown RBP22.73■■□□□ 1.23
PDLIM2-205ENST00000397761 APOBEC3FQ8IUX4 373 aaKnown RBP22.73■■□□□ 1.23
PDLIM2-205ENST00000397761 CDAN1Q8IWY9 1227 aa22.73■■□□□ 1.23
PDLIM2-205ENST00000397761 ADARB2Q9NS39 739 aaKnown RBP22.73■■□□□ 1.23
PDLIM2-205ENST00000397761 STX6O43752 255 aa22.72■■□□□ 1.23
PDLIM2-205ENST00000397761 TOP1P11387 765 aaKnown RBP22.72■■□□□ 1.23
PDLIM2-205ENST00000397761 LMOD1P29536 600 aaPredicted RBP22.72■■□□□ 1.23
PDLIM2-205ENST00000397761 DPY19L2Q6NUT2 758 aa22.72■■□□□ 1.23
PDLIM2-205ENST00000397761 CLEC17AQ6ZS10 378 aa22.72■■□□□ 1.23
PDLIM2-205ENST00000397761 CCDC144CPQ8IYA2 1237 aa22.72■■□□□ 1.23
PDLIM2-205ENST00000397761 RGS22Q8NE09 1264 aa22.72■■□□□ 1.23
PDLIM2-205ENST00000397761 RBM28Q9NW13 759 aaKnown RBP22.72■■□□□ 1.23
PDLIM2-205ENST00000397761 STX8Q9UNK0 236 aa22.72■■□□□ 1.23
PDLIM2-205ENST00000397761 KIF3AQ9Y496 699 aa22.72■■□□□ 1.23
PDLIM2-205ENST00000397761 PITPNM2Q9BZ72 1349 aa22.72■■□□□ 1.23
PDLIM2-205ENST00000397761 WDR33Q9C0J8 1336 aaKnown RBP22.72■■□□□ 1.23
PDLIM2-205ENST00000397761 STK36Q9NRP7 1315 aa22.72■■□□□ 1.23
PDLIM2-205ENST00000397761 NUP133Q8WUM0 1156 aa22.71■■□□□ 1.23
PDLIM2-205ENST00000397761 TNPO1Q92973 898 aaKnown RBP22.71■■□□□ 1.23
PDLIM2-205ENST00000397761 DDX11Q96FC9 970 aa22.71■■□□□ 1.23
PDLIM2-205ENST00000397761 XPO5Q9HAV4 1204 aaKnown RBP eCLIP22.71■■□□□ 1.23
PDLIM2-205ENST00000397761 DOCK1Q14185 1865 aa22.7■■□□□ 1.22
PDLIM2-205ENST00000397761 FUT2Q10981 343 aa22.7■■□□□ 1.22
PDLIM2-205ENST00000397761 RRP1BQ14684 758 aaKnown RBP22.7■■□□□ 1.22
PDLIM2-205ENST00000397761 GRM4Q14833 912 aa22.7■■□□□ 1.22
PDLIM2-205ENST00000397761 ANGEL2Q5VTE6 544 aaKnown RBP22.7■■□□□ 1.22
PDLIM2-205ENST00000397761 LARP1BQ659C4 914 aaKnown RBP22.7■■□□□ 1.22
PDLIM2-205ENST00000397761 TMEM179Q6ZVK1 233 aa22.7■■□□□ 1.22
PDLIM2-205ENST00000397761 NBPF11Q86T75 865 aa22.7■■□□□ 1.22
PDLIM2-205ENST00000397761 DEFB129Q9H1M3 183 aa22.7■■□□□ 1.22
PDLIM2-205ENST00000397761 MTMR6Q9Y217 621 aa22.7■■□□□ 1.22
PDLIM2-205ENST00000397761 GLTPD2A6NH11 291 aa22.69■■□□□ 1.22
PDLIM2-205ENST00000397761 TTLL1O95922 423 aa22.69■■□□□ 1.22
PDLIM2-205ENST00000397761 GUCY1A2P33402 732 aa22.69■■□□□ 1.22
PDLIM2-205ENST00000397761 ABCB5Q2M3G0 1257 aa22.69■■□□□ 1.22
PDLIM2-205ENST00000397761 KANSL2Q9H9L4 492 aa22.69■■□□□ 1.22
PDLIM2-205ENST00000397761 PPP2R3BQ9Y5P8 575 aa22.69■■□□□ 1.22
PDLIM2-205ENST00000397761 TMTC3Q6ZXV5 915 aa22.68■■□□□ 1.22
PDLIM2-205ENST00000397761 CTCFLQ8NI51 663 aaPredicted RBP22.68■■□□□ 1.22
PDLIM2-205ENST00000397761 MKL1Q969V6 931 aa22.68■■□□□ 1.22
PDLIM2-205ENST00000397761 NYAP2Q9P242 653 aa22.68■■□□□ 1.22
PDLIM2-205ENST00000397761 ORC3Q9UBD5 711 aaPredicted RBP22.68■■□□□ 1.22
PDLIM2-205ENST00000397761 FMNL1O95466 1100 aaPredicted RBP22.67■■□□□ 1.22
PDLIM2-205ENST00000397761 ZSCAN22P10073 491 aaPredicted RBP22.67■■□□□ 1.22
PDLIM2-205ENST00000397761 KIF5BP33176 963 aa22.67■■□□□ 1.22
PDLIM2-205ENST00000397761 JAG1P78504 1218 aa22.67■■□□□ 1.22
PDLIM2-205ENST00000397761 FAM184AQ8NB25 1140 aa22.67■■□□□ 1.22
PDLIM2-205ENST00000397761 GGA3Q9NZ52 723 aa22.67■■□□□ 1.22
PDLIM2-205ENST00000397761 MPHOSPH10O00566 681 aaKnown RBP22.66■■□□□ 1.22
PDLIM2-205ENST00000397761 SHROOM1Q2M3G4 852 aaPredicted RBP22.66■■□□□ 1.22
PDLIM2-205ENST00000397761 RNF26Q9BY78 433 aaPredicted RBP22.66■■□□□ 1.22
PDLIM2-205ENST00000397761 SYNPO2Q9UMS6 1093 aa22.66■■□□□ 1.22
PDLIM2-205ENST00000397761 PAPPA2Q9BXP8 1791 aa22.66■■□□□ 1.22
PDLIM2-205ENST00000397761 PALM3A6NDB9 673 aaPredicted RBP22.66■■□□□ 1.22
PDLIM2-205ENST00000397761 SNHG28P0DPA3 235 aa22.66■■□□□ 1.22
PDLIM2-205ENST00000397761 SEPT2Q15019 361 aa22.66■■□□□ 1.22
PDLIM2-205ENST00000397761 CLEC10AQ8IUN9 316 aa22.66■■□□□ 1.22
PDLIM2-205ENST00000397761 SIAH1Q8IUQ4 282 aa22.66■■□□□ 1.22
PDLIM2-205ENST00000397761 PHKBQ93100 1093 aa22.66■■□□□ 1.22
PDLIM2-205ENST00000397761 MAD2L2Q9UI95 211 aa22.66■■□□□ 1.22
PDLIM2-205ENST00000397761 SCAF8Q9UPN6 1271 aaKnown RBP22.66■■□□□ 1.22
PDLIM2-205ENST00000397761 PHF20L1A8MW92 1017 aa22.65■■□□□ 1.22
PDLIM2-205ENST00000397761 GDF11O95390 407 aa22.65■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms