RNA–Protein interactions for RNA: ENST00000397643.3

CUX2-202, Transcript of cut like homeobox 2, humanhuman

TSL 1 (best)

Gene CUX2, Length 890 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2-202ENST00000397643 POLA2Q14181 598 aa19.72■□□□□ 0.75
CUX2-202ENST00000397643 EDC3Q96F86 508 aaKnown RBP19.72■□□□□ 0.75
CUX2-202ENST00000397643 COL25A1Q9BXS0 654 aaPredicted RBP19.72■□□□□ 0.75
CUX2-202ENST00000397643 NDUFB9Q9Y6M9 179 aa19.72■□□□□ 0.75
CUX2-202ENST00000397643 SPTBN5Q9NRC6 3674 aaKnown RBP19.72■□□□□ 0.75
CUX2-202ENST00000397643 EYSQ5T1H1 3165 aa19.71■□□□□ 0.75
CUX2-202ENST00000397643 USP17L15C9J2P7 530 aa19.71■□□□□ 0.75
CUX2-202ENST00000397643 USP17L13C9JLJ4 530 aa19.71■□□□□ 0.75
CUX2-202ENST00000397643 USP17L11C9JVI0 530 aa19.71■□□□□ 0.75
CUX2-202ENST00000397643 USP17L18D6R9N7 530 aa19.71■□□□□ 0.75
CUX2-202ENST00000397643 USP17L22D6RA61 530 aa19.71■□□□□ 0.75
CUX2-202ENST00000397643 USP17L17D6RBQ6 530 aa19.71■□□□□ 0.75
CUX2-202ENST00000397643 USP17L19D6RCP7 530 aa19.71■□□□□ 0.75
CUX2-202ENST00000397643 USP17L20D6RJB6 530 aa19.71■□□□□ 0.75
CUX2-202ENST00000397643 IGSF3O75054 1194 aa19.71■□□□□ 0.75
CUX2-202ENST00000397643 HOXC6P09630 235 aa19.71■□□□□ 0.75
CUX2-202ENST00000397643 USP17L24Q0WX57 530 aa19.71■□□□□ 0.75
CUX2-202ENST00000397643 ZYXQ15942 572 aaKnown RBP19.71■□□□□ 0.75
CUX2-202ENST00000397643 FAM109BQ6ICB4 259 aaPredicted RBP19.71■□□□□ 0.75
CUX2-202ENST00000397643 LBX2Q6XYB7 198 aa19.71■□□□□ 0.75
CUX2-202ENST00000397643 DDX20Q9UHI6 824 aaKnown RBP19.71■□□□□ 0.75
CUX2-202ENST00000397643 ZBED9Q6R2W3 1325 aa19.71■□□□□ 0.75
CUX2-202ENST00000397643 CDH23Q9H251 3354 aa19.7■□□□□ 0.74
CUX2-202ENST00000397643 SLC15A5A6NIM6 579 aa19.7■□□□□ 0.74
CUX2-202ENST00000397643 VCAM1P19320 739 aa19.7■□□□□ 0.74
CUX2-202ENST00000397643 PTPREP23469 700 aa19.7■□□□□ 0.74
CUX2-202ENST00000397643 GRB14Q14449 540 aa19.7■□□□□ 0.74
CUX2-202ENST00000397643 CCDC158Q5M9N0 1113 aa19.7■□□□□ 0.74
CUX2-202ENST00000397643 MFSD14CQ5VZR4 134 aa19.7■□□□□ 0.74
CUX2-202ENST00000397643 ATF7IPQ6VMQ6 1270 aa19.7■□□□□ 0.74
CUX2-202ENST00000397643 CATSPERGQ6ZRH7 1159 aa19.7■□□□□ 0.74
CUX2-202ENST00000397643 TRPV1Q8NER1 839 aa19.7■□□□□ 0.74
CUX2-202ENST00000397643 ACER1Q8TDN7 264 aa19.7■□□□□ 0.74
CUX2-202ENST00000397643 SENP6Q9GZR1 1112 aaPredicted RBP19.7■□□□□ 0.74
CUX2-202ENST00000397643 KIAA1683Q9H0B3 1180 aa19.7■□□□□ 0.74
CUX2-202ENST00000397643 EHD4Q9H223 541 aa19.7■□□□□ 0.74
CUX2-202ENST00000397643 BTBD7Q9P203 1132 aa19.7■□□□□ 0.74
CUX2-202ENST00000397643 DBNLQ9UJU6 430 aaKnown RBP19.7■□□□□ 0.74
CUX2-202ENST00000397643 CYP7A1P22680 504 aa19.69■□□□□ 0.74
CUX2-202ENST00000397643 CCNA1P78396 465 aa19.69■□□□□ 0.74
CUX2-202ENST00000397643 PHF6Q8IWS0 365 aaKnown RBP eCLIP19.69■□□□□ 0.74
CUX2-202ENST00000397643 NPLOC4Q8TAT6 608 aa19.69■□□□□ 0.74
CUX2-202ENST00000397643 SSH3Q8TE77 659 aa19.69■□□□□ 0.74
CUX2-202ENST00000397643 LPAR1Q92633 364 aa19.69■□□□□ 0.74
CUX2-202ENST00000397643 FEZ1Q99689 392 aa19.69■□□□□ 0.74
CUX2-202ENST00000397643 ZNF236Q9UL36 1845 aa19.69■□□□□ 0.74
CUX2-202ENST00000397643 RLFQ13129 1914 aa19.68■□□□□ 0.74
CUX2-202ENST00000397643 SPDYE16A6NNV3 312 aaPredicted RBP19.68■□□□□ 0.74
CUX2-202ENST00000397643 GLRX3O76003 335 aaKnown RBP19.68■□□□□ 0.74
CUX2-202ENST00000397643 MIGA1Q8NAN2 632 aa19.68■□□□□ 0.74
CUX2-202ENST00000397643 CWC22Q9HCG8 908 aaKnown RBP19.68■□□□□ 0.74
CUX2-202ENST00000397643 TLR7Q9NYK1 1049 aaKnown RBP19.68■□□□□ 0.74
CUX2-202ENST00000397643 DNM1LO00429 736 aa19.67■□□□□ 0.74
CUX2-202ENST00000397643 IPO8O15397 1037 aaKnown RBP19.67■□□□□ 0.74
CUX2-202ENST00000397643 MSCO60682 206 aa19.67■□□□□ 0.74
CUX2-202ENST00000397643 CYBAP13498 195 aa19.67■□□□□ 0.74
CUX2-202ENST00000397643 CYP2C19P33261 490 aa19.67■□□□□ 0.74
CUX2-202ENST00000397643 ATN1P54259 1190 aaPredicted RBP19.67■□□□□ 0.74
CUX2-202ENST00000397643 USP14P54578 494 aa19.67■□□□□ 0.74
CUX2-202ENST00000397643 CLUAP1Q96AJ1 413 aa19.67■□□□□ 0.74
CUX2-202ENST00000397643 SERPINB13Q9UIV8 391 aa19.67■□□□□ 0.74
CUX2-202ENST00000397643 A0A0G2JMZ2 1700 aa19.66■□□□□ 0.74
CUX2-202ENST00000397643 BCAR3O75815 825 aa19.66■□□□□ 0.74
CUX2-202ENST00000397643 GUCY1A2P33402 732 aa19.66■□□□□ 0.74
CUX2-202ENST00000397643 SHMT1P34896 483 aa19.66■□□□□ 0.74
CUX2-202ENST00000397643 RAB3GAP1Q15042 981 aa19.66■□□□□ 0.74
CUX2-202ENST00000397643 WDR78Q5VTH9 848 aa19.66■□□□□ 0.74
CUX2-202ENST00000397643 FAM161BQ96MY7 647 aa19.66■□□□□ 0.74
CUX2-202ENST00000397643 LBHD1Q9BQE6 289 aaPredicted RBP19.66■□□□□ 0.74
CUX2-202ENST00000397643 RTP1P59025 263 aa19.65■□□□□ 0.74
CUX2-202ENST00000397643 ATP2B2Q01814 1243 aa19.65■□□□□ 0.74
CUX2-202ENST00000397643 ABCB5Q2M3G0 1257 aa19.65■□□□□ 0.74
CUX2-202ENST00000397643 CERKLQ49MI3 558 aaPredicted RBP19.65■□□□□ 0.74
CUX2-202ENST00000397643 TMEM57Q8N5G2 664 aa19.65■□□□□ 0.74
CUX2-202ENST00000397643 RPAP3Q9H6T3 665 aaPredicted RBP19.65■□□□□ 0.74
CUX2-202ENST00000397643 IDH1O75874 414 aaKnown RBP19.64■□□□□ 0.73
CUX2-202ENST00000397643 CNGA1P29973 690 aa19.64■□□□□ 0.73
CUX2-202ENST00000397643 USP5P45974 858 aa19.64■□□□□ 0.73
CUX2-202ENST00000397643 PLCD1P51178 756 aa19.64■□□□□ 0.73
CUX2-202ENST00000397643 ATP8B2P98198 1209 aa19.64■□□□□ 0.73
CUX2-202ENST00000397643 CERS3Q8IU89 383 aa19.64■□□□□ 0.73
CUX2-202ENST00000397643 MAGEB6Q8N7X4 407 aa19.64■□□□□ 0.73
CUX2-202ENST00000397643 FRAT1Q92837 279 aaPredicted RBP19.64■□□□□ 0.73
CUX2-202ENST00000397643 EAF2Q96CJ1 260 aaPredicted RBP19.64■□□□□ 0.73
CUX2-202ENST00000397643 NOP58Q9Y2X3 529 aaKnown RBP19.64■□□□□ 0.73
CUX2-202ENST00000397643 IVNS1ABPQ9Y6Y0 642 aa19.64■□□□□ 0.73
CUX2-202ENST00000397643 PRUNE2Q8WUY3 3088 aa19.64■□□□□ 0.73
CUX2-202ENST00000397643 SURF6O75683 361 aaKnown RBP19.63■□□□□ 0.73
CUX2-202ENST00000397643 GABPAQ06546 454 aa19.63■□□□□ 0.73
CUX2-202ENST00000397643 OS9Q13438 667 aaPredicted RBP19.63■□□□□ 0.73
CUX2-202ENST00000397643 SNX17Q15036 470 aa19.63■□□□□ 0.73
CUX2-202ENST00000397643 GJC2Q5T442 439 aaPredicted RBP19.63■□□□□ 0.73
CUX2-202ENST00000397643 CCDC8Q9H0W5 538 aaPredicted RBP19.63■□□□□ 0.73
CUX2-202ENST00000397643 ANTXR1Q9H6X2 564 aa19.63■□□□□ 0.73
CUX2-202ENST00000397643 NAV1Q8NEY1 1877 aa19.62■□□□□ 0.73
CUX2-202ENST00000397643 ADORA2AP29274 412 aa19.62■□□□□ 0.73
CUX2-202ENST00000397643 EVX2Q03828 476 aa19.62■□□□□ 0.73
CUX2-202ENST00000397643 C9orf50Q5SZB4 431 aa19.62■□□□□ 0.73
CUX2-202ENST00000397643 OLFML2BQ68BL8 750 aa19.62■□□□□ 0.73
CUX2-202ENST00000397643 TTC6Q86TZ1 520 aa19.62■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms