RNA–Protein interactions for RNA: ENST00000397163.7

CAPN3-206, Transcript of calpain 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CAPN3, Length 3,228 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-206ENST00000397163 FAM204AQ9H8W3 233 aa10.38□□□□□ -0.75
CAPN3-206ENST00000397163 SUFUQ9UMX1 484 aa10.38□□□□□ -0.75
CAPN3-206ENST00000397163 TTF2Q9UNY4 1162 aaKnown RBP10.38□□□□□ -0.75
CAPN3-206ENST00000397163 PHRF1Q9P1Y6 1649 aaKnown RBP10.38□□□□□ -0.75
CAPN3-206ENST00000397163 MCAMP43121 646 aa10.38□□□□□ -0.75
CAPN3-206ENST00000397163 NR5A1Q13285 461 aa10.38□□□□□ -0.75
CAPN3-206ENST00000397163 IFIT5Q13325 482 aaKnown RBP10.38□□□□□ -0.75
CAPN3-206ENST00000397163 RRP12Q5JTH9 1297 aaKnown RBP10.38□□□□□ -0.75
CAPN3-206ENST00000397163 MCTP2Q6DN12 878 aa10.38□□□□□ -0.75
CAPN3-206ENST00000397163 CCDC91Q7Z6B0 441 aa10.38□□□□□ -0.75
CAPN3-206ENST00000397163 CNGA4Q8IV77 575 aa10.38□□□□□ -0.75
CAPN3-206ENST00000397163 CSRNP2Q9H175 543 aa10.38□□□□□ -0.75
CAPN3-206ENST00000397163 ACBD3Q9H3P7 528 aa10.38□□□□□ -0.75
CAPN3-206ENST00000397163 TRPM3Q9HCF6 1732 aaPredicted RBP10.38□□□□□ -0.75
CAPN3-206ENST00000397163 MAP3K15Q6ZN16 1313 aa10.37□□□□□ -0.75
CAPN3-206ENST00000397163 TULP1O00294 542 aaPredicted RBP10.37□□□□□ -0.75
CAPN3-206ENST00000397163 SGMS1Q86VZ5 419 aa10.37□□□□□ -0.75
CAPN3-206ENST00000397163 AIDAQ96BJ3 306 aa10.37□□□□□ -0.75
CAPN3-206ENST00000397163 CTAGE1Q96RT6 745 aa10.37□□□□□ -0.75
CAPN3-206ENST00000397163 ADD3Q9UEY8 706 aaKnown RBP10.37□□□□□ -0.75
CAPN3-206ENST00000397163 CEP131Q9UPN4 1083 aa10.37□□□□□ -0.75
CAPN3-206ENST00000397163 SRPRBQ9Y5M8 271 aaKnown RBP10.37□□□□□ -0.75
CAPN3-206ENST00000397163 NWD2Q9ULI1 1742 aa10.37□□□□□ -0.75
CAPN3-206ENST00000397163 MEGF6O75095 1541 aa10.37□□□□□ -0.75
CAPN3-206ENST00000397163 ZNF532Q9HCE3 1301 aa10.37□□□□□ -0.75
CAPN3-206ENST00000397163 STK36Q9NRP7 1315 aa10.37□□□□□ -0.75
CAPN3-206ENST00000397163 CASP1P29466 404 aa10.37□□□□□ -0.75
CAPN3-206ENST00000397163 MAP2K2P36507 400 aa10.37□□□□□ -0.75
CAPN3-206ENST00000397163 CCT6AP40227 531 aaKnown RBP10.37□□□□□ -0.75
CAPN3-206ENST00000397163 RTN1Q16799 776 aa10.37□□□□□ -0.75
CAPN3-206ENST00000397163 WHAMMP3Q1A5X7 153 aa10.37□□□□□ -0.75
CAPN3-206ENST00000397163 SMYD4Q8IYR2 804 aaPredicted RBP10.37□□□□□ -0.75
CAPN3-206ENST00000397163 CMTR1Q8N1G2 835 aaKnown RBP10.37□□□□□ -0.75
CAPN3-206ENST00000397163 ANKRD20A12PQ8NF67 263 aa10.37□□□□□ -0.75
CAPN3-206ENST00000397163 FAM71BQ8TC56 605 aa10.37□□□□□ -0.75
CAPN3-206ENST00000397163 CABP5Q9NP86 173 aa10.37□□□□□ -0.75
CAPN3-206ENST00000397163 WWC3Q9ULE0 1092 aa10.37□□□□□ -0.75
CAPN3-206ENST00000397163 CD44P16070 742 aaKnown RBP10.37□□□□□ -0.75
CAPN3-206ENST00000397163 IFNAR1P17181 557 aa10.37□□□□□ -0.75
CAPN3-206ENST00000397163 FXR1P51114 621 aaKnown RBP eCLIP10.37□□□□□ -0.75
CAPN3-206ENST00000397163 MMS22LQ6ZRQ5 1243 aa10.37□□□□□ -0.75
CAPN3-206ENST00000397163 APTXQ7Z2E3 356 aaKnown RBP10.37□□□□□ -0.75
CAPN3-206ENST00000397163 TADA2BQ86TJ2 420 aa10.37□□□□□ -0.75
CAPN3-206ENST00000397163 ZNF579Q8NAF0 562 aaKnown RBP10.37□□□□□ -0.75
CAPN3-206ENST00000397163 RIN2Q8WYP3 895 aaPredicted RBP10.37□□□□□ -0.75
CAPN3-206ENST00000397163 FOXP1Q9H334 677 aaPredicted RBP10.37□□□□□ -0.75
CAPN3-206ENST00000397163 ZSWIM5Q9P217 1185 aa10.37□□□□□ -0.75
CAPN3-206ENST00000397163 TBC1D2BQ9UPU7 963 aa10.37□□□□□ -0.75
CAPN3-206ENST00000397163 ARFGEF2Q9Y6D5 1785 aa10.36□□□□□ -0.75
CAPN3-206ENST00000397163 CTDSPL2Q05D32 466 aa10.36□□□□□ -0.75
CAPN3-206ENST00000397163 FAM89AQ96GI7 184 aa10.36□□□□□ -0.75
CAPN3-206ENST00000397163 ZKSCAN3Q9BRR0 538 aa10.36□□□□□ -0.75
CAPN3-206ENST00000397163 NAPBQ9H115 298 aa10.36□□□□□ -0.75
CAPN3-206ENST00000397163 PIH1D3Q9NQM4 214 aaKnown RBP10.36□□□□□ -0.75
CAPN3-206ENST00000397163 FBXO3Q9UK99 471 aa10.36□□□□□ -0.75
CAPN3-206ENST00000397163 ADAMTS7Q9UKP4 1686 aa10.36□□□□□ -0.75
CAPN3-206ENST00000397163 N4BP3O15049 544 aa10.36□□□□□ -0.75
CAPN3-206ENST00000397163 COBLO75128 1261 aa10.36□□□□□ -0.75
CAPN3-206ENST00000397163 ECM2O94769 699 aaPredicted RBP10.36□□□□□ -0.75
CAPN3-206ENST00000397163 ABL1P00519 1130 aa10.36□□□□□ -0.75
CAPN3-206ENST00000397163 GYPCP04921 128 aa10.36□□□□□ -0.75
CAPN3-206ENST00000397163 LIFRP42702 1097 aa10.36□□□□□ -0.75
CAPN3-206ENST00000397163 AKAP17AQ02040 695 aaKnown RBP10.36□□□□□ -0.75
CAPN3-206ENST00000397163 TTF1Q15361 905 aaPredicted RBP10.36□□□□□ -0.75
CAPN3-206ENST00000397163 TMTC1Q8IUR5 882 aa10.36□□□□□ -0.75
CAPN3-206ENST00000397163 NOA1Q8NC60 698 aaKnown RBP10.36□□□□□ -0.75
CAPN3-206ENST00000397163 OXER1Q8TDS5 423 aa10.36□□□□□ -0.75
CAPN3-206ENST00000397163 NUP133Q8WUM0 1156 aa10.36□□□□□ -0.75
CAPN3-206ENST00000397163 CCDC51Q96ER9 411 aa10.36□□□□□ -0.75
CAPN3-206ENST00000397163 NUP88Q99567 741 aaPredicted RBP10.36□□□□□ -0.75
CAPN3-206ENST00000397163 SPEF2Q9C093 1822 aa10.36□□□□□ -0.75
CAPN3-206ENST00000397163 NHSL1Q5SYE7 1610 aa10.36□□□□□ -0.75
CAPN3-206ENST00000397163 PATL2C9JE40 543 aaKnown RBP10.35□□□□□ -0.75
CAPN3-206ENST00000397163 TUBBP07437 444 aa10.35□□□□□ -0.75
CAPN3-206ENST00000397163 PDE6AP16499 860 aa10.35□□□□□ -0.75
CAPN3-206ENST00000397163 PBX1P40424 430 aa10.35□□□□□ -0.75
CAPN3-206ENST00000397163 UBE3CQ15386 1083 aa10.35□□□□□ -0.75
CAPN3-206ENST00000397163 CHRNA2Q15822 529 aa10.35□□□□□ -0.75
CAPN3-206ENST00000397163 NCAPH2Q6IBW4 605 aa10.35□□□□□ -0.75
CAPN3-206ENST00000397163 LDHAL6AQ6ZMR3 332 aa10.35□□□□□ -0.75
CAPN3-206ENST00000397163 MSL3Q8N5Y2 521 aaKnown RBP10.35□□□□□ -0.75
CAPN3-206ENST00000397163 SLF1Q9BQI6 1058 aa10.35□□□□□ -0.75
CAPN3-206ENST00000397163 ABCC12Q96J65 1359 aa10.35□□□□□ -0.75
CAPN3-206ENST00000397163 CCDC148Q8NFR7 591 aa10.35□□□□□ -0.75
CAPN3-206ENST00000397163 SPATA20Q8TB22 786 aa10.35□□□□□ -0.75
CAPN3-206ENST00000397163 EPSTI1Q96J88 318 aa10.35□□□□□ -0.75
CAPN3-206ENST00000397163 CNNM1Q9NRU3 951 aa10.35□□□□□ -0.75
CAPN3-206ENST00000397163 MYO6Q9UM54 1294 aa10.35□□□□□ -0.75
CAPN3-206ENST00000397163 C4AP0C0L4 1744 aa10.35□□□□□ -0.75
CAPN3-206ENST00000397163 C4BP0C0L5 1744 aa10.35□□□□□ -0.75
CAPN3-206ENST00000397163 LRRIQ3A6PVS8 624 aaPredicted RBP10.35□□□□□ -0.75
CAPN3-206ENST00000397163 DEXIO95424 95 aa10.35□□□□□ -0.75
CAPN3-206ENST00000397163 CDC25AP30304 524 aa10.35□□□□□ -0.75
CAPN3-206ENST00000397163 ERVK-24P63145 666 aa10.35□□□□□ -0.75
CAPN3-206ENST00000397163 CUL4BQ13620 913 aa10.35□□□□□ -0.75
CAPN3-206ENST00000397163 CDKAL1Q5VV42 579 aa10.35□□□□□ -0.75
CAPN3-206ENST00000397163 PAGE5Q96GU1 130 aa10.35□□□□□ -0.75
CAPN3-206ENST00000397163 HINFPQ9BQA5 517 aa10.35□□□□□ -0.75
CAPN3-206ENST00000397163 EHD4Q9H223 541 aa10.35□□□□□ -0.75
CAPN3-206ENST00000397163 VPS16Q9H269 839 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms