RNA–Protein interactions for RNA: ENST00000397102.5

SEC13-206, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-206ENST00000397102 USP17L24Q0WX57 530 aa18.37■□□□□ 0.53
SEC13-206ENST00000397102 WDR78Q5VTH9 848 aa18.37■□□□□ 0.53
SEC13-206ENST00000397102 ADGRA1Q86SQ6 560 aa18.37■□□□□ 0.53
SEC13-206ENST00000397102 CDX2Q99626 313 aaPredicted RBP18.37■□□□□ 0.53
SEC13-206ENST00000397102 NDUFB9Q9Y6M9 179 aa18.37■□□□□ 0.53
SEC13-206ENST00000397102 IGSF3O75054 1194 aa18.36■□□□□ 0.53
SEC13-206ENST00000397102 GH2P01242 217 aa18.36■□□□□ 0.53
SEC13-206ENST00000397102 ATP2B2Q01814 1243 aa18.36■□□□□ 0.53
SEC13-206ENST00000397102 GRB14Q14449 540 aa18.36■□□□□ 0.53
SEC13-206ENST00000397102 LBX2Q6XYB7 198 aa18.36■□□□□ 0.53
SEC13-206ENST00000397102 CDCA7LQ96GN5 454 aa18.36■□□□□ 0.53
SEC13-206ENST00000397102 FEZ1Q99689 392 aa18.36■□□□□ 0.53
SEC13-206ENST00000397102 ZNF236Q9UL36 1845 aa18.36■□□□□ 0.53
SEC13-206ENST00000397102 IVNS1ABPQ9Y6Y0 642 aa18.36■□□□□ 0.53
SEC13-206ENST00000397102 USP14P54578 494 aa18.35■□□□□ 0.53
SEC13-206ENST00000397102 G3BP1Q13283 466 aaKnown RBP eCLIP18.35■□□□□ 0.53
SEC13-206ENST00000397102 ZYXQ15942 572 aaKnown RBP18.35■□□□□ 0.53
SEC13-206ENST00000397102 CATSPERGQ6ZRH7 1159 aa18.35■□□□□ 0.53
SEC13-206ENST00000397102 TRMT2AQ8IZ69 625 aaKnown RBP18.35■□□□□ 0.53
SEC13-206ENST00000397102 MAFAQ8NHW3 353 aaPredicted RBP18.35■□□□□ 0.53
SEC13-206ENST00000397102 NPLOC4Q8TAT6 608 aa18.35■□□□□ 0.53
SEC13-206ENST00000397102 SNRKQ9NRH2 765 aa18.35■□□□□ 0.53
SEC13-206ENST00000397102 SAP30BPQ9UHR5 308 aaKnown RBP18.35■□□□□ 0.53
SEC13-206ENST00000397102 IGHA2P01877 340 aa18.34■□□□□ 0.53
SEC13-206ENST00000397102 CYBAP13498 195 aa18.34■□□□□ 0.53
SEC13-206ENST00000397102 CYP2C19P33261 490 aa18.34■□□□□ 0.53
SEC13-206ENST00000397102 SHHQ15465 462 aa18.34■□□□□ 0.53
SEC13-206ENST00000397102 TTC39AQ5SRH9 613 aa18.34■□□□□ 0.53
SEC13-206ENST00000397102 TATDN1Q6P1N9 297 aa18.34■□□□□ 0.53
SEC13-206ENST00000397102 TRPV1Q8NER1 839 aa18.34■□□□□ 0.53
SEC13-206ENST00000397102 KIAA1683Q9H0B3 1180 aa18.34■□□□□ 0.53
SEC13-206ENST00000397102 SEMA6BQ9H3T3 888 aa18.34■□□□□ 0.53
SEC13-206ENST00000397102 BTBD7Q9P203 1132 aa18.34■□□□□ 0.53
SEC13-206ENST00000397102 ATP11BQ9Y2G3 1177 aa18.34■□□□□ 0.53
SEC13-206ENST00000397102 CYP2E1P05181 493 aaPredicted RBP18.33■□□□□ 0.52
SEC13-206ENST00000397102 VCAM1P19320 739 aa18.33■□□□□ 0.52
SEC13-206ENST00000397102 CCDC158Q5M9N0 1113 aa18.33■□□□□ 0.52
SEC13-206ENST00000397102 C9orf50Q5SZB4 431 aa18.33■□□□□ 0.52
SEC13-206ENST00000397102 GJC2Q5T442 439 aaPredicted RBP18.33■□□□□ 0.52
SEC13-206ENST00000397102 ARRDC4Q8NCT1 418 aa18.33■□□□□ 0.52
SEC13-206ENST00000397102 ARHGAP45Q92619 1136 aa18.33■□□□□ 0.52
SEC13-206ENST00000397102 PNMA6EA0A0J9YXQ4 647 aa18.32■□□□□ 0.52
SEC13-206ENST00000397102 SPDYE16A6NNV3 312 aaPredicted RBP18.32■□□□□ 0.52
SEC13-206ENST00000397102 KBTBD13C9JR72 458 aa18.32■□□□□ 0.52
SEC13-206ENST00000397102 SMAD3P84022 425 aaKnown RBP18.32■□□□□ 0.52
SEC13-206ENST00000397102 SLC39A5Q6ZMH5 540 aa18.32■□□□□ 0.52
SEC13-206ENST00000397102 GPR108Q9NPR9 543 aa18.32■□□□□ 0.52
SEC13-206ENST00000397102 GNAI2P04899 355 aa18.31■□□□□ 0.52
SEC13-206ENST00000397102 DYNLL1P63167 89 aaKnown RBP18.31■□□□□ 0.52
SEC13-206ENST00000397102 SNX17Q15036 470 aa18.31■□□□□ 0.52
SEC13-206ENST00000397102 RAB3GAP1Q15042 981 aa18.31■□□□□ 0.52
SEC13-206ENST00000397102 OLFML2BQ68BL8 750 aa18.31■□□□□ 0.52
SEC13-206ENST00000397102 DBNDD2Q9BQY9 259 aa18.31■□□□□ 0.52
SEC13-206ENST00000397102 EHD4Q9H223 541 aa18.31■□□□□ 0.52
SEC13-206ENST00000397102 PRDM6Q9NQX0 595 aa18.31■□□□□ 0.52
SEC13-206ENST00000397102 PRDM5Q9NQX1 630 aaPredicted RBP18.31■□□□□ 0.52
SEC13-206ENST00000397102 SERPINB13Q9UIV8 391 aa18.31■□□□□ 0.52
SEC13-206ENST00000397102 DNAH12Q6ZR08 3092 aa18.3■□□□□ 0.52
SEC13-206ENST00000397102 A0A0G2JMZ2 1700 aa18.3■□□□□ 0.52
SEC13-206ENST00000397102 TNNI3KQ59H18 835 aa18.3■□□□□ 0.52
SEC13-206ENST00000397102 CERS3Q8IU89 383 aa18.3■□□□□ 0.52
SEC13-206ENST00000397102 MYLIPQ8WY64 445 aa18.3■□□□□ 0.52
SEC13-206ENST00000397102 BADQ92934 168 aa18.3■□□□□ 0.52
SEC13-206ENST00000397102 ZNF512BQ96KM6 892 aaPredicted RBP18.3■□□□□ 0.52
SEC13-206ENST00000397102 TTYH1Q9H313 450 aaPredicted RBP18.3■□□□□ 0.52
SEC13-206ENST00000397102 RPAP3Q9H6T3 665 aaPredicted RBP18.3■□□□□ 0.52
SEC13-206ENST00000397102 FPGT-TNNI3KV9GXZ4 949 aa18.3■□□□□ 0.52
SEC13-206ENST00000397102 VCANP13611 3396 aa18.29■□□□□ 0.52
SEC13-206ENST00000397102 SEPT4O43236 478 aa18.29■□□□□ 0.52
SEC13-206ENST00000397102 STRNO43815 780 aa18.29■□□□□ 0.52
SEC13-206ENST00000397102 CYP7A1P22680 504 aa18.29■□□□□ 0.52
SEC13-206ENST00000397102 ZAP70P43403 619 aa18.29■□□□□ 0.52
SEC13-206ENST00000397102 USP5P45974 858 aa18.29■□□□□ 0.52
SEC13-206ENST00000397102 RARSP54136 660 aaKnown RBP18.29■□□□□ 0.52
SEC13-206ENST00000397102 ABCB5Q2M3G0 1257 aa18.29■□□□□ 0.52
SEC13-206ENST00000397102 TRIM60Q495X7 471 aa18.29■□□□□ 0.52
SEC13-206ENST00000397102 CERKLQ49MI3 558 aaPredicted RBP18.29■□□□□ 0.52
SEC13-206ENST00000397102 DPP9Q86TI2 863 aa18.29■□□□□ 0.52
SEC13-206ENST00000397102 ACER1Q8TDN7 264 aa18.29■□□□□ 0.52
SEC13-206ENST00000397102 CABP5Q9NP86 173 aa18.29■□□□□ 0.52
SEC13-206ENST00000397102 PIH1D3Q9NQM4 214 aaKnown RBP18.29■□□□□ 0.52
SEC13-206ENST00000397102 PDLIM7Q9NR12 457 aa18.29■□□□□ 0.52
SEC13-206ENST00000397102 LAMA2P24043 3122 aaKnown RBP18.28■□□□□ 0.52
SEC13-206ENST00000397102 FOSL2P15408 326 aa18.28■□□□□ 0.52
SEC13-206ENST00000397102 ADORA2AP29274 412 aa18.28■□□□□ 0.52
SEC13-206ENST00000397102 C1orf53Q5VUE5 145 aa18.28■□□□□ 0.52
SEC13-206ENST00000397102 TTC6Q86TZ1 520 aa18.28■□□□□ 0.52
SEC13-206ENST00000397102 SYMPKQ92797 1274 aaKnown RBP18.28■□□□□ 0.52
SEC13-206ENST00000397102 TMEM265A0A087WTH1 108 aa18.27■□□□□ 0.52
SEC13-206ENST00000397102 ANO1Q5XXA6 986 aa18.27■□□□□ 0.52
SEC13-206ENST00000397102 SHCBP1Q8NEM2 672 aa18.27■□□□□ 0.52
SEC13-206ENST00000397102 MOV10L1Q9BXT6 1211 aaKnown RBP18.27■□□□□ 0.52
SEC13-206ENST00000397102 SPTBN5Q9NRC6 3674 aaKnown RBP18.27■□□□□ 0.52
SEC13-206ENST00000397102 TRIM43BA6NCK2 446 aa18.26■□□□□ 0.51
SEC13-206ENST00000397102 SH3RF1Q7Z6J0 888 aa18.26■□□□□ 0.51
SEC13-206ENST00000397102 MIGA1Q8NAN2 632 aa18.26■□□□□ 0.51
SEC13-206ENST00000397102 TRIM43Q96BQ3 446 aaPredicted RBP18.26■□□□□ 0.51
SEC13-206ENST00000397102 EYSQ5T1H1 3165 aa18.26■□□□□ 0.51
SEC13-206ENST00000397102 NAV1Q8NEY1 1877 aa18.26■□□□□ 0.51
SEC13-206ENST00000397102 ZNF316A6NFI3 1004 aaPredicted RBP18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms