RNA–Protein interactions for RNA: ENST00000397053.6

UPF2-203, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 5 BASIC

Gene UPF2, Length 5,369 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-203ENST00000397053 DIS3L2Q8IYB7 885 aaKnown RBP7.96□□□□□ -1.14
UPF2-203ENST00000397053 DACT3Q96B18 629 aaPredicted RBP7.96□□□□□ -1.14
UPF2-203ENST00000397053 APOL6Q9BWW8 343 aa7.96□□□□□ -1.14
UPF2-203ENST00000397053 MIS12Q9H081 205 aa7.96□□□□□ -1.14
UPF2-203ENST00000397053 BICC1Q9H694 974 aaKnown RBP7.96□□□□□ -1.14
UPF2-203ENST00000397053 HELLSQ9NRZ9 838 aa7.96□□□□□ -1.14
UPF2-203ENST00000397053 ARHGEF11O15085 1522 aa7.96□□□□□ -1.14
UPF2-203ENST00000397053 ERCC3P19447 782 aa7.96□□□□□ -1.14
UPF2-203ENST00000397053 TTC38Q5R3I4 469 aa7.96□□□□□ -1.14
UPF2-203ENST00000397053 SLITRK6Q9H5Y7 841 aa7.96□□□□□ -1.14
UPF2-203ENST00000397053 KRT81Q14533 505 aa7.96□□□□□ -1.14
UPF2-203ENST00000397053 ARHGAP44Q17R89 818 aa7.96□□□□□ -1.14
UPF2-203ENST00000397053 XKR9Q5GH70 373 aa7.96□□□□□ -1.14
UPF2-203ENST00000397053 ZNF790Q6PG37 636 aa7.96□□□□□ -1.14
UPF2-203ENST00000397053 KRT222Q8N1A0 295 aa7.96□□□□□ -1.14
UPF2-203ENST00000397053 MCUR1Q96AQ8 359 aa7.96□□□□□ -1.14
UPF2-203ENST00000397053 ANGEL1Q9UNK9 670 aaKnown RBP7.96□□□□□ -1.14
UPF2-203ENST00000397053 AKR1B15C9JRZ8 316 aaPredicted RBP7.95□□□□□ -1.14
UPF2-203ENST00000397053 A1BGP04217 495 aa7.95□□□□□ -1.14
UPF2-203ENST00000397053 ELF1P32519 619 aa7.95□□□□□ -1.14
UPF2-203ENST00000397053 FAM102BQ5T8I3 360 aa7.95□□□□□ -1.14
UPF2-203ENST00000397053 CCDC105Q8IYK2 499 aa7.95□□□□□ -1.14
UPF2-203ENST00000397053 NLGN1Q8N2Q7 840 aa7.95□□□□□ -1.14
UPF2-203ENST00000397053 PSPC1Q8WXF1 523 aaKnown RBP7.95□□□□□ -1.14
UPF2-203ENST00000397053 VCXQ9H320 206 aa7.95□□□□□ -1.14
UPF2-203ENST00000397053 NRBP2Q9NSY0 501 aa7.95□□□□□ -1.14
UPF2-203ENST00000397053 CTNND2Q9UQB3 1225 aa7.95□□□□□ -1.14
UPF2-203ENST00000397053 UTP11Q9Y3A2 253 aaKnown RBP7.95□□□□□ -1.14
UPF2-203ENST00000397053 MRPL11Q9Y3B7 192 aaKnown RBP7.95□□□□□ -1.14
UPF2-203ENST00000397053 ELP1O95163 1332 aa7.95□□□□□ -1.14
UPF2-203ENST00000397053 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP7.95□□□□□ -1.14
UPF2-203ENST00000397053 H0YCG3 227 aa7.95□□□□□ -1.14
UPF2-203ENST00000397053 GPAA1O43292 621 aa7.95□□□□□ -1.14
UPF2-203ENST00000397053 KRT10P13645 584 aa7.95□□□□□ -1.14
UPF2-203ENST00000397053 TYRO3Q06418 890 aa7.95□□□□□ -1.14
UPF2-203ENST00000397053 CEP85LQ5SZL2 805 aa7.95□□□□□ -1.14
UPF2-203ENST00000397053 BEND3Q5T5X7 828 aa7.95□□□□□ -1.14
UPF2-203ENST00000397053 C8orf74Q6P047 294 aa7.95□□□□□ -1.14
UPF2-203ENST00000397053 CCDC62Q6P9F0 684 aa7.95□□□□□ -1.14
UPF2-203ENST00000397053 VSIG1Q86XK7 387 aa7.95□□□□□ -1.14
UPF2-203ENST00000397053 IP6K1Q92551 441 aa7.95□□□□□ -1.14
UPF2-203ENST00000397053 XAGE2Q96GT9 111 aa7.95□□□□□ -1.14
UPF2-203ENST00000397053 EYA1Q99502 592 aa7.95□□□□□ -1.14
UPF2-203ENST00000397053 KIF9Q9HAQ2 790 aa7.95□□□□□ -1.14
UPF2-203ENST00000397053 MYO1AQ9UBC5 1043 aa7.95□□□□□ -1.14
UPF2-203ENST00000397053 PCDHB13Q9Y5F0 798 aa7.95□□□□□ -1.14
UPF2-203ENST00000397053 CEP104O60308 925 aa7.95□□□□□ -1.14
UPF2-203ENST00000397053 HPDP32754 393 aaPredicted RBP7.95□□□□□ -1.14
UPF2-203ENST00000397053 SKAP1Q86WV1 359 aa7.95□□□□□ -1.14
UPF2-203ENST00000397053 MYLK4Q86YV6 388 aaPredicted RBP7.95□□□□□ -1.14
UPF2-203ENST00000397053 GBP7Q8N8V2 638 aaPredicted RBP7.95□□□□□ -1.14
UPF2-203ENST00000397053 FNDC3AQ9Y2H6 1198 aaKnown RBP7.95□□□□□ -1.14
UPF2-203ENST00000397053 A0A1B0GVL5 298 aa7.95□□□□□ -1.14
UPF2-203ENST00000397053 SORBS3O60504 671 aa7.95□□□□□ -1.14
UPF2-203ENST00000397053 PTPREP23469 700 aa7.95□□□□□ -1.14
UPF2-203ENST00000397053 MAGEA1P43355 309 aa7.95□□□□□ -1.14
UPF2-203ENST00000397053 KLHL30Q0D2K2 578 aa7.95□□□□□ -1.14
UPF2-203ENST00000397053 PALM2Q8IXS6 379 aa7.95□□□□□ -1.14
UPF2-203ENST00000397053 MIPOL1Q8TD10 442 aa7.95□□□□□ -1.14
UPF2-203ENST00000397053 POMGNT1Q8WZA1 660 aa7.95□□□□□ -1.14
UPF2-203ENST00000397053 ZBTB9Q96C00 473 aa7.95□□□□□ -1.14
UPF2-203ENST00000397053 IBTKQ9P2D0 1353 aaPredicted RBP7.94□□□□□ -1.14
UPF2-203ENST00000397053 LRRIQ4A6NIV6 560 aa7.94□□□□□ -1.14
UPF2-203ENST00000397053 ZNF131P52739 623 aa7.94□□□□□ -1.14
UPF2-203ENST00000397053 LRMPQ12912 555 aa7.94□□□□□ -1.14
UPF2-203ENST00000397053 NCOA1Q15788 1441 aa7.94□□□□□ -1.14
UPF2-203ENST00000397053 HADHQ16836 314 aaKnown RBP7.94□□□□□ -1.14
UPF2-203ENST00000397053 SUPT20HL1Q3ZLR7 823 aa7.94□□□□□ -1.14
UPF2-203ENST00000397053 ANKRD20A3Q5VUR7 823 aa7.94□□□□□ -1.14
UPF2-203ENST00000397053 MCF2L2Q86YR7 1114 aa7.94□□□□□ -1.14
UPF2-203ENST00000397053 EXOC8Q8IYI6 725 aa7.94□□□□□ -1.14
UPF2-203ENST00000397053 CACNA2D3Q8IZS8 1091 aa7.94□□□□□ -1.14
UPF2-203ENST00000397053 IGSF22Q8N9C0 903 aa7.94□□□□□ -1.14
UPF2-203ENST00000397053 HAUS1Q96CS2 278 aa7.94□□□□□ -1.14
UPF2-203ENST00000397053 PRIMPOLQ96LW4 560 aa7.94□□□□□ -1.14
UPF2-203ENST00000397053 NT5C3AQ9H0P0 336 aa7.94□□□□□ -1.14
UPF2-203ENST00000397053 NUCKS1Q9H1E3 243 aaKnown RBP7.94□□□□□ -1.14
UPF2-203ENST00000397053 ATP8A2Q9NTI2 1148 aa7.94□□□□□ -1.14
UPF2-203ENST00000397053 LARSQ9P2J5 1176 aaKnown RBP7.94□□□□□ -1.14
UPF2-203ENST00000397053 SLC8A2Q9UPR5 921 aa7.94□□□□□ -1.14
UPF2-203ENST00000397053 EHBP1L1Q8N3D4 1523 aa7.94□□□□□ -1.14
UPF2-203ENST00000397053 MAP3K5Q99683 1374 aa7.94□□□□□ -1.14
UPF2-203ENST00000397053 HGSO14964 777 aaPredicted RBP7.94□□□□□ -1.14
UPF2-203ENST00000397053 AK2P54819 239 aa7.94□□□□□ -1.14
UPF2-203ENST00000397053 PPP2R5BQ15173 497 aa7.94□□□□□ -1.14
UPF2-203ENST00000397053 NME8Q8N427 588 aa7.94□□□□□ -1.14
UPF2-203ENST00000397053 FAM71BQ8TC56 605 aa7.94□□□□□ -1.14
UPF2-203ENST00000397053 MAIP1Q8WWC4 291 aa7.94□□□□□ -1.14
UPF2-203ENST00000397053 RSAD2Q8WXG1 361 aa7.94□□□□□ -1.14
UPF2-203ENST00000397053 DBNDD2Q9BQY9 259 aa7.94□□□□□ -1.14
UPF2-203ENST00000397053 ANAPC5Q9UJX4 755 aa7.94□□□□□ -1.14
UPF2-203ENST00000397053 SYNJ2BP-COX16A0A087WUM0 186 aa7.94□□□□□ -1.14
UPF2-203ENST00000397053 ARHGAP4P98171 946 aa7.94□□□□□ -1.14
UPF2-203ENST00000397053 NUCB1Q02818 461 aa7.94□□□□□ -1.14
UPF2-203ENST00000397053 ARMC9Q7Z3E5 817 aa7.94□□□□□ -1.14
UPF2-203ENST00000397053 CEP120Q8N960 986 aa7.94□□□□□ -1.14
UPF2-203ENST00000397053 PGBD1Q96JS3 809 aa7.94□□□□□ -1.14
UPF2-203ENST00000397053 VPS37BQ9H9H4 285 aa7.94□□□□□ -1.14
UPF2-203ENST00000397053 COX16Q9P0S2 106 aa7.94□□□□□ -1.14
UPF2-203ENST00000397053 KCNH3Q9ULD8 1083 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms