RNA–Protein interactions for RNA: ENST00000397043.7

ATP2A3-206, Transcript of ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene ATP2A3, Length 3,197 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3-206ENST00000397043 PLCD1P51178 756 aa18.08■□□□□ 0.49
ATP2A3-206ENST00000397043 EIF5P55010 431 aaKnown RBP18.08■□□□□ 0.49
ATP2A3-206ENST00000397043 PTGDRQ13258 359 aa18.08■□□□□ 0.49
ATP2A3-206ENST00000397043 CTCFLQ8NI51 663 aaPredicted RBP18.08■□□□□ 0.49
ATP2A3-206ENST00000397043 MED15Q96RN5 788 aa18.08■□□□□ 0.49
ATP2A3-206ENST00000397043 CDC5LQ99459 802 aaKnown RBP18.08■□□□□ 0.49
ATP2A3-206ENST00000397043 PUF60Q9UHX1 559 aaKnown RBP18.08■□□□□ 0.49
ATP2A3-206ENST00000397043 RBL2Q08999 1139 aa18.08■□□□□ 0.48
ATP2A3-206ENST00000397043 PLIN2Q99541 437 aa18.08■□□□□ 0.48
ATP2A3-206ENST00000397043 BCL9O00512 1426 aa18.08■□□□□ 0.48
ATP2A3-206ENST00000397043 MYH7P12883 1935 aa18.08■□□□□ 0.48
ATP2A3-206ENST00000397043 STX10O60499 249 aa18.07■□□□□ 0.48
ATP2A3-206ENST00000397043 KIF20AO95235 890 aa18.07■□□□□ 0.48
ATP2A3-206ENST00000397043 CD44P16070 742 aaKnown RBP18.07■□□□□ 0.48
ATP2A3-206ENST00000397043 KCNJ6P48051 423 aa18.07■□□□□ 0.48
ATP2A3-206ENST00000397043 PPP2R3AQ06190 1150 aa18.07■□□□□ 0.48
ATP2A3-206ENST00000397043 FILIP1LQ4L180 1135 aa18.07■□□□□ 0.48
ATP2A3-206ENST00000397043 PAGE5Q96GU1 130 aa18.07■□□□□ 0.48
ATP2A3-206ENST00000397043 RNF26Q9BY78 433 aaPredicted RBP18.07■□□□□ 0.48
ATP2A3-206ENST00000397043 VPS16Q9H269 839 aa18.07■□□□□ 0.48
ATP2A3-206ENST00000397043 LOC102724428A0A0B4J2F2 783 aa18.07■□□□□ 0.48
ATP2A3-206ENST00000397043 A0A0U1RQJ8 604 aa18.07■□□□□ 0.48
ATP2A3-206ENST00000397043 SIK1P57059 783 aa18.07■□□□□ 0.48
ATP2A3-206ENST00000397043 TTC38Q5R3I4 469 aa18.07■□□□□ 0.48
ATP2A3-206ENST00000397043 RRAGBQ5VZM2 374 aa18.07■□□□□ 0.48
ATP2A3-206ENST00000397043 ATRIPQ8WXE1 791 aa18.07■□□□□ 0.48
ATP2A3-206ENST00000397043 PNPLA7Q6ZV29 1317 aa18.07■□□□□ 0.48
ATP2A3-206ENST00000397043 UBR2Q8IWV8 1755 aa18.07■□□□□ 0.48
ATP2A3-206ENST00000397043 RTL9Q8NET4 1388 aa18.07■□□□□ 0.48
ATP2A3-206ENST00000397043 GABPB1Q06547 395 aaPredicted RBP18.07■□□□□ 0.48
ATP2A3-206ENST00000397043 MAPK8IP2Q13387 824 aaPredicted RBP18.07■□□□□ 0.48
ATP2A3-206ENST00000397043 TERF2Q15554 542 aa18.07■□□□□ 0.48
ATP2A3-206ENST00000397043 DDB1Q16531 1140 aa18.07■□□□□ 0.48
ATP2A3-206ENST00000397043 INTS5Q6P9B9 1019 aaKnown RBP18.07■□□□□ 0.48
ATP2A3-206ENST00000397043 TMEM139Q8IV31 216 aa18.07■□□□□ 0.48
ATP2A3-206ENST00000397043 SHISA4Q96DD7 197 aa18.07■□□□□ 0.48
ATP2A3-206ENST00000397043 EEF2KMTQ96G04 330 aa18.07■□□□□ 0.48
ATP2A3-206ENST00000397043 NOL10Q9BSC4 688 aaKnown RBP18.07■□□□□ 0.48
ATP2A3-206ENST00000397043 N4BP3O15049 544 aa18.06■□□□□ 0.48
ATP2A3-206ENST00000397043 CCDC175P0C221 793 aa18.06■□□□□ 0.48
ATP2A3-206ENST00000397043 MRPL44Q9H9J2 332 aaKnown RBP18.06■□□□□ 0.48
ATP2A3-206ENST00000397043 TSPY2A6NKD2 308 aa18.06■□□□□ 0.48
ATP2A3-206ENST00000397043 PNMA6AP0CW24 399 aaPredicted RBP18.06■□□□□ 0.48
ATP2A3-206ENST00000397043 H2AFXP16104 143 aaPredicted RBP18.06■□□□□ 0.48
ATP2A3-206ENST00000397043 ZNF18P17022 549 aa18.06■□□□□ 0.48
ATP2A3-206ENST00000397043 ERFEQ4G0M1 354 aa18.06■□□□□ 0.48
ATP2A3-206ENST00000397043 TUBB4AP04350 444 aa18.05■□□□□ 0.48
ATP2A3-206ENST00000397043 SLFN14P0C7P3 912 aa18.05■□□□□ 0.48
ATP2A3-206ENST00000397043 CASP14P31944 242 aa18.05■□□□□ 0.48
ATP2A3-206ENST00000397043 C3orf67Q6ZVT6 689 aa18.05■□□□□ 0.48
ATP2A3-206ENST00000397043 C4AP0C0L4 1744 aa18.05■□□□□ 0.48
ATP2A3-206ENST00000397043 C4BP0C0L5 1744 aa18.05■□□□□ 0.48
ATP2A3-206ENST00000397043 NUTM2BA6NNL0 878 aaPredicted RBP18.05■□□□□ 0.48
ATP2A3-206ENST00000397043 NUTM2EB1AL46 878 aaPredicted RBP18.05■□□□□ 0.48
ATP2A3-206ENST00000397043 VEGFAP15692 232 aaPredicted RBP18.05■□□□□ 0.48
ATP2A3-206ENST00000397043 PKN1Q16512 942 aa18.05■□□□□ 0.48
ATP2A3-206ENST00000397043 TADA3O75528 432 aa18.05■□□□□ 0.48
ATP2A3-206ENST00000397043 TPM1P09493 284 aa18.05■□□□□ 0.48
ATP2A3-206ENST00000397043 CYP2D6P10635 497 aa18.05■□□□□ 0.48
ATP2A3-206ENST00000397043 SARSP49591 514 aaKnown RBP18.05■□□□□ 0.48
ATP2A3-206ENST00000397043 ITPK1Q13572 414 aa18.05■□□□□ 0.48
ATP2A3-206ENST00000397043 SEC23AQ15436 765 aa18.05■□□□□ 0.48
ATP2A3-206ENST00000397043 RASGRP4Q8TDF6 673 aa18.05■□□□□ 0.48
ATP2A3-206ENST00000397043 NUP88Q99567 741 aaPredicted RBP18.05■□□□□ 0.48
ATP2A3-206ENST00000397043 CAMTA2O94983 1202 aa18.04■□□□□ 0.48
ATP2A3-206ENST00000397043 KLRK1P26718 216 aa18.04■□□□□ 0.48
ATP2A3-206ENST00000397043 KIF4BQ2VIQ3 1234 aa18.04■□□□□ 0.48
ATP2A3-206ENST00000397043 PARP10Q53GL7 1025 aa18.04■□□□□ 0.48
ATP2A3-206ENST00000397043 ZNF569Q5MCW4 686 aa18.04■□□□□ 0.48
ATP2A3-206ENST00000397043 SPATA1Q5VX52 437 aa18.04■□□□□ 0.48
ATP2A3-206ENST00000397043 ZNF579Q8NAF0 562 aaKnown RBP18.04■□□□□ 0.48
ATP2A3-206ENST00000397043 SRRTQ9BXP5 876 aaKnown RBP18.04■□□□□ 0.48
ATP2A3-206ENST00000397043 EFCAB8A8MWE9 144 aa18.04■□□□□ 0.48
ATP2A3-206ENST00000397043 TRIML1Q8N9V2 468 aa18.04■□□□□ 0.48
ATP2A3-206ENST00000397043 TAB2Q9NYJ8 693 aa18.04■□□□□ 0.48
ATP2A3-206ENST00000397043 GOLGA6L9A6NEM1 432 aa18.03■□□□□ 0.48
ATP2A3-206ENST00000397043 NR1I3Q14994 352 aa18.03■□□□□ 0.48
ATP2A3-206ENST00000397043 GPKOWQ92917 476 aaPredicted RBP eCLIP18.03■□□□□ 0.48
ATP2A3-206ENST00000397043 FHOD1Q9Y613 1164 aa18.03■□□□□ 0.48
ATP2A3-206ENST00000397043 MYO1BO43795 1136 aa18.03■□□□□ 0.48
ATP2A3-206ENST00000397043 KIF5CO60282 957 aa18.03■□□□□ 0.48
ATP2A3-206ENST00000397043 TBX2Q13207 712 aaPredicted RBP18.03■□□□□ 0.48
ATP2A3-206ENST00000397043 NTSR2O95665 410 aa18.03■□□□□ 0.48
ATP2A3-206ENST00000397043 RAD9BQ6WBX8 426 aa18.03■□□□□ 0.48
ATP2A3-206ENST00000397043 CELF1Q92879 486 aaKnown RBP18.03■□□□□ 0.48
ATP2A3-206ENST00000397043 PHF20Q9BVI0 1012 aa18.03■□□□□ 0.48
ATP2A3-206ENST00000397043 ZCCHC17Q9NP64 241 aaKnown RBP18.03■□□□□ 0.48
ATP2A3-206ENST00000397043 TFRCP02786 760 aaKnown RBP18.02■□□□□ 0.48
ATP2A3-206ENST00000397043 ERCC5P28715 1186 aaPredicted RBP18.02■□□□□ 0.48
ATP2A3-206ENST00000397043 CTR9Q6PD62 1173 aa18.02■□□□□ 0.48
ATP2A3-206ENST00000397043 FCHSD1Q86WN1 690 aa18.02■□□□□ 0.48
ATP2A3-206ENST00000397043 SRBD1Q8N5C6 995 aaKnown RBP18.02■□□□□ 0.48
ATP2A3-206ENST00000397043 KCNQ2O43526 872 aa18.02■□□□□ 0.48
ATP2A3-206ENST00000397043 ACRBPQ8NEB7 543 aa18.02■□□□□ 0.48
ATP2A3-206ENST00000397043 RIOK1Q9BRS2 568 aaKnown RBP18.02■□□□□ 0.48
ATP2A3-206ENST00000397043 MCM9Q9NXL9 1143 aa18.02■□□□□ 0.48
ATP2A3-206ENST00000397043 TOGARAM1Q9Y4F4 1720 aa18.02■□□□□ 0.47
ATP2A3-206ENST00000397043 PRDX5P30044 214 aa18.01■□□□□ 0.47
ATP2A3-206ENST00000397043 TROAPQ12815 778 aa18.01■□□□□ 0.47
ATP2A3-206ENST00000397043 CUL4BQ13620 913 aa18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms