RNA–Protein interactions for RNA: ENST00000396603.6

CLTA-203, Transcript of clathrin light chain A, humanhuman

TSL 1 (best) BASIC

Gene CLTA, Length 1,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTA-203ENST00000396603 KIF1BPQ96EK5 621 aa19.78■□□□□ 0.76
CLTA-203ENST00000396603 FEZ1Q99689 392 aa19.78■□□□□ 0.76
CLTA-203ENST00000396603 CHMP4BQ9H444 224 aaKnown RBP19.78■□□□□ 0.76
CLTA-203ENST00000396603 ANTXR1Q9H6X2 564 aa19.78■□□□□ 0.76
CLTA-203ENST00000396603 CABP5Q9NP86 173 aa19.78■□□□□ 0.76
CLTA-203ENST00000396603 DDX60LQ5H9U9 1706 aaKnown RBP19.78■□□□□ 0.76
CLTA-203ENST00000396603 MYH1P12882 1939 aa19.77■□□□□ 0.76
CLTA-203ENST00000396603 HMMRO75330 724 aa19.77■□□□□ 0.76
CLTA-203ENST00000396603 PRKAR2AP13861 404 aaKnown RBP19.77■□□□□ 0.76
CLTA-203ENST00000396603 ZKSCAN1P17029 563 aaPredicted RBP19.77■□□□□ 0.76
CLTA-203ENST00000396603 CYP2B6P20813 491 aa19.77■□□□□ 0.76
CLTA-203ENST00000396603 ABCB5Q2M3G0 1257 aa19.77■□□□□ 0.76
CLTA-203ENST00000396603 SHROOM1Q2M3G4 852 aaPredicted RBP19.77■□□□□ 0.76
CLTA-203ENST00000396603 PLEKHH3Q7Z736 793 aa19.77■□□□□ 0.76
CLTA-203ENST00000396603 APBA2Q99767 749 aa19.77■□□□□ 0.76
CLTA-203ENST00000396603 TRIOBPQ9H2D6 2365 aa19.77■□□□□ 0.75
CLTA-203ENST00000396603 MAGEB6P1A0A0J9YX57 407 aa19.76■□□□□ 0.75
CLTA-203ENST00000396603 BMP8BP34820 402 aa19.76■□□□□ 0.75
CLTA-203ENST00000396603 GABPAQ06546 454 aa19.76■□□□□ 0.75
CLTA-203ENST00000396603 Q3C1V9 767 aa19.76■□□□□ 0.75
CLTA-203ENST00000396603 CATSPERGQ6ZRH7 1159 aa19.76■□□□□ 0.75
CLTA-203ENST00000396603 CRNKL1Q9BZJ0 848 aaKnown RBP19.76■□□□□ 0.75
CLTA-203ENST00000396603 C11orf49Q9H6J7 331 aa19.76■□□□□ 0.75
CLTA-203ENST00000396603 VCAM1P19320 739 aa19.75■□□□□ 0.75
CLTA-203ENST00000396603 SHMT1P34896 483 aa19.75■□□□□ 0.75
CLTA-203ENST00000396603 MNX1P50219 401 aaPredicted RBP19.75■□□□□ 0.75
CLTA-203ENST00000396603 TRIM32Q13049 653 aa19.75■□□□□ 0.75
CLTA-203ENST00000396603 PORCNQ9H237 461 aa19.75■□□□□ 0.75
CLTA-203ENST00000396603 DDX19BQ9UMR2 479 aa19.75■□□□□ 0.75
CLTA-203ENST00000396603 SZT2Q5T011 3432 aa19.74■□□□□ 0.75
CLTA-203ENST00000396603 RAB11FIP3O75154 756 aa19.74■□□□□ 0.75
CLTA-203ENST00000396603 POLR3DP05423 398 aaPredicted RBP19.74■□□□□ 0.75
CLTA-203ENST00000396603 HOXC6P09630 235 aa19.74■□□□□ 0.75
CLTA-203ENST00000396603 PDE6AP16499 860 aa19.74■□□□□ 0.75
CLTA-203ENST00000396603 MAP2K5Q13163 448 aa19.74■□□□□ 0.75
CLTA-203ENST00000396603 RAB3GAP1Q15042 981 aa19.74■□□□□ 0.75
CLTA-203ENST00000396603 SLC9C2Q5TAH2 1124 aa19.74■□□□□ 0.75
CLTA-203ENST00000396603 PANK1Q8TE04 598 aa19.74■□□□□ 0.75
CLTA-203ENST00000396603 DIS3LQ8TF46 1054 aaKnown RBP19.74■□□□□ 0.75
CLTA-203ENST00000396603 PAGR1Q9BTK6 254 aa19.74■□□□□ 0.75
CLTA-203ENST00000396603 NDUFB9Q9Y6M9 179 aa19.74■□□□□ 0.75
CLTA-203ENST00000396603 SLC15A5A6NIM6 579 aa19.73■□□□□ 0.75
CLTA-203ENST00000396603 PLCD1P51178 756 aa19.73■□□□□ 0.75
CLTA-203ENST00000396603 POTEEQ6S8J3 1075 aa19.73■□□□□ 0.75
CLTA-203ENST00000396603 CWC22Q9HCG8 908 aaKnown RBP19.73■□□□□ 0.75
CLTA-203ENST00000396603 IL1RAPL2Q9NP60 686 aa19.73■□□□□ 0.75
CLTA-203ENST00000396603 SWAP70Q9UH65 585 aa19.73■□□□□ 0.75
CLTA-203ENST00000396603 CNMDO75829 334 aa19.72■□□□□ 0.75
CLTA-203ENST00000396603 IFIT2P09913 472 aaKnown RBP19.72■□□□□ 0.75
CLTA-203ENST00000396603 CACNB2Q08289 660 aaPredicted RBP19.72■□□□□ 0.75
CLTA-203ENST00000396603 GPR153Q6NV75 609 aa19.72■□□□□ 0.75
CLTA-203ENST00000396603 EDC3Q96F86 508 aaKnown RBP19.72■□□□□ 0.75
CLTA-203ENST00000396603 GDF15Q99988 308 aa19.72■□□□□ 0.75
CLTA-203ENST00000396603 ZBTB40Q9NUA8 1239 aa19.72■□□□□ 0.75
CLTA-203ENST00000396603 TCRBV5S4A2TA0A5A2 114 aa19.71■□□□□ 0.75
CLTA-203ENST00000396603 MSCO60682 206 aa19.71■□□□□ 0.75
CLTA-203ENST00000396603 COL6A1P12109 1028 aa19.71■□□□□ 0.75
CLTA-203ENST00000396603 ACER1Q8TDN7 264 aa19.71■□□□□ 0.75
CLTA-203ENST00000396603 DCP1AQ9NPI6 582 aaPredicted RBP19.71■□□□□ 0.75
CLTA-203ENST00000396603 MCM9Q9NXL9 1143 aa19.71■□□□□ 0.75
CLTA-203ENST00000396603 IVNS1ABPQ9Y6Y0 642 aa19.71■□□□□ 0.75
CLTA-203ENST00000396603 ZNF532Q9HCE3 1301 aa19.71■□□□□ 0.75
CLTA-203ENST00000396603 NAV1Q8NEY1 1877 aa19.71■□□□□ 0.75
CLTA-203ENST00000396603 SPDYE16A6NNV3 312 aaPredicted RBP19.7■□□□□ 0.74
CLTA-203ENST00000396603 PEX10O60683 326 aa19.7■□□□□ 0.74
CLTA-203ENST00000396603 PTPREP23469 700 aa19.7■□□□□ 0.74
CLTA-203ENST00000396603 GUCY1A2P33402 732 aa19.7■□□□□ 0.74
CLTA-203ENST00000396603 GRB14Q14449 540 aa19.7■□□□□ 0.74
CLTA-203ENST00000396603 ZYXQ15942 572 aaKnown RBP19.7■□□□□ 0.74
CLTA-203ENST00000396603 MFSD14CQ5VZR4 134 aa19.7■□□□□ 0.74
CLTA-203ENST00000396603 LHX8Q68G74 356 aa19.7■□□□□ 0.74
CLTA-203ENST00000396603 TMEM179Q6ZVK1 233 aa19.7■□□□□ 0.74
CLTA-203ENST00000396603 LPAR1Q92633 364 aa19.7■□□□□ 0.74
CLTA-203ENST00000396603 RPAP3Q9H6T3 665 aaPredicted RBP19.7■□□□□ 0.74
CLTA-203ENST00000396603 ATP8A2Q9NTI2 1148 aa19.7■□□□□ 0.74
CLTA-203ENST00000396603 HOXC10Q9NYD6 342 aa19.7■□□□□ 0.74
CLTA-203ENST00000396603 GOLIM4O00461 696 aa19.69■□□□□ 0.74
CLTA-203ENST00000396603 C7orf61Q8IZ16 206 aa19.69■□□□□ 0.74
CLTA-203ENST00000396603 MB21D1Q8N884 522 aa19.69■□□□□ 0.74
CLTA-203ENST00000396603 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.69■□□□□ 0.74
CLTA-203ENST00000396603 SH2D4AQ9H788 454 aa19.69■□□□□ 0.74
CLTA-203ENST00000396603 STAP2Q9UGK3 403 aa19.69■□□□□ 0.74
CLTA-203ENST00000396603 PFASO15067 1338 aa19.69■□□□□ 0.74
CLTA-203ENST00000396603 ALPK3Q96L96 1907 aa19.68■□□□□ 0.74
CLTA-203ENST00000396603 ZNF236Q9UL36 1845 aa19.68■□□□□ 0.74
CLTA-203ENST00000396603 STRNO43815 780 aa19.68■□□□□ 0.74
CLTA-203ENST00000396603 ATP5JP18859 108 aa19.68■□□□□ 0.74
CLTA-203ENST00000396603 COG2Q14746 738 aa19.68■□□□□ 0.74
CLTA-203ENST00000396603 SEPT2Q15019 361 aa19.68■□□□□ 0.74
CLTA-203ENST00000396603 CCL14Q16627 93 aa19.68■□□□□ 0.74
CLTA-203ENST00000396603 SHCBP1Q8NEM2 672 aa19.68■□□□□ 0.74
CLTA-203ENST00000396603 CCDC17Q96LX7 622 aa19.68■□□□□ 0.74
CLTA-203ENST00000396603 DNAJC2Q99543 621 aaKnown RBP19.68■□□□□ 0.74
CLTA-203ENST00000396603 IGHA2P01877 340 aa19.67■□□□□ 0.74
CLTA-203ENST00000396603 ADD2P35612 726 aa19.67■□□□□ 0.74
CLTA-203ENST00000396603 SIRT2Q8IXJ6 389 aa19.67■□□□□ 0.74
CLTA-203ENST00000396603 PAG1Q9NWQ8 432 aa19.67■□□□□ 0.74
CLTA-203ENST00000396603 BTBD7Q9P203 1132 aa19.67■□□□□ 0.74
CLTA-203ENST00000396603 CCND3P30281 292 aaPredicted RBP19.66■□□□□ 0.74
CLTA-203ENST00000396603 UBE3CQ15386 1083 aa19.66■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms