RNA–Protein interactions for RNA: ENST00000395983.7

BDNF-206, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 3,776 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-206ENST00000395983 CSRNP2Q9H175 543 aa9.36□□□□□ -0.91
BDNF-206ENST00000395983 GREM2Q9H772 168 aa9.36□□□□□ -0.91
BDNF-206ENST00000395983 INTS13Q9NVM9 706 aa9.36□□□□□ -0.91
BDNF-206ENST00000395983 CHD4Q14839 1912 aa9.36□□□□□ -0.91
BDNF-206ENST00000395983 FMR1Q06787 632 aaKnown RBP eCLIP9.36□□□□□ -0.91
BDNF-206ENST00000395983 CKAP4Q07065 602 aaKnown RBP9.36□□□□□ -0.91
BDNF-206ENST00000395983 HSP90AA4PQ58FG1 418 aa9.36□□□□□ -0.91
BDNF-206ENST00000395983 CABLES1Q8TDN4 633 aa9.36□□□□□ -0.91
BDNF-206ENST00000395983 NUP88Q99567 741 aaPredicted RBP9.36□□□□□ -0.91
BDNF-206ENST00000395983 UBXN6Q9BZV1 441 aa9.36□□□□□ -0.91
BDNF-206ENST00000395983 MED4Q9NPJ6 270 aa9.36□□□□□ -0.91
BDNF-206ENST00000395983 STRN4Q9NRL3 753 aa9.36□□□□□ -0.91
BDNF-206ENST00000395983 SAMSN1Q9NSI8 373 aaKnown RBP9.36□□□□□ -0.91
BDNF-206ENST00000395983 FAM217BQ9NTX9 383 aaPredicted RBP9.36□□□□□ -0.91
BDNF-206ENST00000395983 LRP2BPQ9P2M1 347 aa9.36□□□□□ -0.91
BDNF-206ENST00000395983 KCNJ14Q9UNX9 436 aa9.36□□□□□ -0.91
BDNF-206ENST00000395983 USP5P45974 858 aa9.36□□□□□ -0.91
BDNF-206ENST00000395983 PHKA1P46020 1223 aa9.36□□□□□ -0.91
BDNF-206ENST00000395983 HNRNPH2P55795 449 aaKnown RBP9.36□□□□□ -0.91
BDNF-206ENST00000395983 ZSCAN26Q16670 478 aa9.36□□□□□ -0.91
BDNF-206ENST00000395983 SPECC1Q5M775 1068 aa9.36□□□□□ -0.91
BDNF-206ENST00000395983 MSANTD4Q8NCY6 345 aa9.36□□□□□ -0.91
BDNF-206ENST00000395983 FUT8Q9BYC5 575 aa9.36□□□□□ -0.91
BDNF-206ENST00000395983 ST7Q9NRC1 585 aa9.36□□□□□ -0.91
BDNF-206ENST00000395983 ADD3Q9UEY8 706 aaKnown RBP9.36□□□□□ -0.91
BDNF-206ENST00000395983 TCRBV5S4A2TA0A5A2 114 aa9.35□□□□□ -0.91
BDNF-206ENST00000395983 ERVV-1B6SEH8 477 aa9.35□□□□□ -0.91
BDNF-206ENST00000395983 TNNT3P45378 269 aaPredicted RBP9.35□□□□□ -0.91
BDNF-206ENST00000395983 CTDSPL2Q05D32 466 aa9.35□□□□□ -0.91
BDNF-206ENST00000395983 GOLGA8FQ08AF8 430 aa9.35□□□□□ -0.91
BDNF-206ENST00000395983 GOLGA8DPQ0D2H9 430 aa9.35□□□□□ -0.91
BDNF-206ENST00000395983 DESI2Q9BSY9 194 aa9.35□□□□□ -0.91
BDNF-206ENST00000395983 ZNHIT6Q9NWK9 470 aaKnown RBP9.35□□□□□ -0.91
BDNF-206ENST00000395983 PCDHB6Q9Y5E3 794 aa9.35□□□□□ -0.91
BDNF-206ENST00000395983 TIAM2Q8IVF5 1701 aa9.35□□□□□ -0.91
BDNF-206ENST00000395983 MYH3P11055 1940 aa9.35□□□□□ -0.91
BDNF-206ENST00000395983 BMP6P22004 513 aa9.35□□□□□ -0.91
BDNF-206ENST00000395983 IGHMBP2P38935 993 aaKnown RBP9.35□□□□□ -0.91
BDNF-206ENST00000395983 LMAN1P49257 510 aa9.35□□□□□ -0.91
BDNF-206ENST00000395983 NT5C2P49902 561 aa9.35□□□□□ -0.91
BDNF-206ENST00000395983 TOB1P50616 345 aaPredicted RBP9.35□□□□□ -0.91
BDNF-206ENST00000395983 RBL2Q08999 1139 aa9.35□□□□□ -0.91
BDNF-206ENST00000395983 FAM71BQ8TC56 605 aa9.35□□□□□ -0.91
BDNF-206ENST00000395983 CPLX3Q8WVH0 158 aa9.35□□□□□ -0.91
BDNF-206ENST00000395983 MAGEC2Q9UBF1 373 aaPredicted RBP9.35□□□□□ -0.91
BDNF-206ENST00000395983 RAB21Q9UL25 225 aa9.35□□□□□ -0.91
BDNF-206ENST00000395983 AKAP11Q9UKA4 1901 aa9.35□□□□□ -0.91
BDNF-206ENST00000395983 PRPF3O43395 683 aaKnown RBP9.35□□□□□ -0.91
BDNF-206ENST00000395983 PRR29P0C7W0 189 aa9.35□□□□□ -0.91
BDNF-206ENST00000395983 AFMP43652 599 aa9.35□□□□□ -0.91
BDNF-206ENST00000395983 KRT83P78385 493 aa9.35□□□□□ -0.91
BDNF-206ENST00000395983 PAK1Q13153 545 aa9.35□□□□□ -0.91
BDNF-206ENST00000395983 CDKAL1Q5VV42 579 aa9.35□□□□□ -0.91
BDNF-206ENST00000395983 VGLL2Q8N8G2 317 aa9.35□□□□□ -0.91
BDNF-206ENST00000395983 ARMT1Q9H993 441 aa9.35□□□□□ -0.91
BDNF-206ENST00000395983 MKRN1Q9UHC7 482 aaKnown RBP9.35□□□□□ -0.91
BDNF-206ENST00000395983 RWDD2AQ9UIY3 292 aa9.35□□□□□ -0.91
BDNF-206ENST00000395983 SOWAHDA6NJG2 315 aa9.34□□□□□ -0.91
BDNF-206ENST00000395983 GPTP24298 496 aa9.34□□□□□ -0.91
BDNF-206ENST00000395983 PPP1R2P41236 205 aa9.34□□□□□ -0.91
BDNF-206ENST00000395983 ZNF827Q17R98 1081 aa9.34□□□□□ -0.91
BDNF-206ENST00000395983 IQCDQ96DY2 449 aa9.34□□□□□ -0.91
BDNF-206ENST00000395983 PAGE5Q96GU1 130 aa9.34□□□□□ -0.91
BDNF-206ENST00000395983 MAP2K7O14733 419 aa9.34□□□□□ -0.91
BDNF-206ENST00000395983 FOXN1O15353 648 aa9.34□□□□□ -0.91
BDNF-206ENST00000395983 GTPBP6O43824 516 aaPredicted RBP9.34□□□□□ -0.91
BDNF-206ENST00000395983 DDAH1O94760 285 aa9.34□□□□□ -0.91
BDNF-206ENST00000395983 CALML3P27482 149 aa9.34□□□□□ -0.91
BDNF-206ENST00000395983 GTF2E1P29083 439 aaPredicted RBP9.34□□□□□ -0.91
BDNF-206ENST00000395983 ACTN2P35609 894 aa9.34□□□□□ -0.91
BDNF-206ENST00000395983 PPARAQ07869 468 aa9.34□□□□□ -0.91
BDNF-206ENST00000395983 TTC38Q5R3I4 469 aa9.34□□□□□ -0.91
BDNF-206ENST00000395983 IFIT1BQ5T764 474 aaKnown RBP9.34□□□□□ -0.91
BDNF-206ENST00000395983 RRAGBQ5VZM2 374 aa9.34□□□□□ -0.91
BDNF-206ENST00000395983 NOC3LQ8WTT2 800 aaKnown RBP9.34□□□□□ -0.91
BDNF-206ENST00000395983 HAUS4Q9H6D7 363 aa9.34□□□□□ -0.91
BDNF-206ENST00000395983 LIMA1Q9UHB6 759 aaKnown RBP9.34□□□□□ -0.91
BDNF-206ENST00000395983 ADAM21Q9UKJ8 722 aa9.34□□□□□ -0.91
BDNF-206ENST00000395983 LRP6O75581 1613 aa9.34□□□□□ -0.91
BDNF-206ENST00000395983 GSG1L2A8MUP6 293 aa9.34□□□□□ -0.92
BDNF-206ENST00000395983 H7C1D1 291 aa9.34□□□□□ -0.92
BDNF-206ENST00000395983 MYL1P05976 194 aa9.34□□□□□ -0.92
BDNF-206ENST00000395983 MCM6Q14566 821 aa9.34□□□□□ -0.92
BDNF-206ENST00000395983 DNAJC10Q8IXB1 793 aa9.34□□□□□ -0.92
BDNF-206ENST00000395983 CDC5LQ99459 802 aaKnown RBP9.34□□□□□ -0.92
BDNF-206ENST00000395983 FAM107BQ9H098 131 aa9.34□□□□□ -0.92
BDNF-206ENST00000395983 PUF60Q9UHX1 559 aaKnown RBP9.34□□□□□ -0.92
BDNF-206ENST00000395983 ECM29Q5VYK3 1845 aa9.33□□□□□ -0.92
BDNF-206ENST00000395983 FECHP22830 423 aa9.33□□□□□ -0.92
BDNF-206ENST00000395983 CASP14P31944 242 aa9.33□□□□□ -0.92
BDNF-206ENST00000395983 NR5A1Q13285 461 aa9.33□□□□□ -0.92
BDNF-206ENST00000395983 CCDC152Q4G0S7 254 aa9.33□□□□□ -0.92
BDNF-206ENST00000395983 CTR9Q6PD62 1173 aa9.33□□□□□ -0.92
BDNF-206ENST00000395983 CCDC82Q8N4S0 544 aa9.33□□□□□ -0.92
BDNF-206ENST00000395983 SYMPKQ92797 1274 aaKnown RBP9.33□□□□□ -0.92
BDNF-206ENST00000395983 CCDC102AQ96A19 550 aa9.33□□□□□ -0.92
BDNF-206ENST00000395983 A0A0U1RQG5 324 aaPredicted RBP9.33□□□□□ -0.92
BDNF-206ENST00000395983 TULP2O00295 520 aa9.33□□□□□ -0.92
BDNF-206ENST00000395983 KRT86O43790 486 aa9.33□□□□□ -0.92
BDNF-206ENST00000395983 FGFR2P21802 821 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms