RNA–Protein interactions for RNA: ENST00000395860.6

VCPKMT-202, Transcript of valosin containing protein lysine methyltransferase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCPKMT, Length 1,761 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-202ENST00000395860 CEP95Q96GE4 821 aa23.85■■□□□ 1.41
VCPKMT-202ENST00000395860 MYH4Q9Y623 1939 aa23.85■■□□□ 1.41
VCPKMT-202ENST00000395860 PTPDC1A2A3K4 754 aa23.84■■□□□ 1.41
VCPKMT-202ENST00000395860 CDC27P30260 824 aa23.84■■□□□ 1.41
VCPKMT-202ENST00000395860 HMGN5P82970 282 aaKnown RBP23.84■■□□□ 1.41
VCPKMT-202ENST00000395860 RTN1Q16799 776 aa23.84■■□□□ 1.41
VCPKMT-202ENST00000395860 CPLX2Q6PUV4 134 aaKnown RBP23.84■■□□□ 1.41
VCPKMT-202ENST00000395860 CDAN1Q8IWY9 1227 aa23.84■■□□□ 1.41
VCPKMT-202ENST00000395860 GNL3Q9BVP2 549 aaKnown RBP eCLIP23.84■■□□□ 1.41
VCPKMT-202ENST00000395860 PGAP2Q9UHJ9 254 aa23.84■■□□□ 1.41
VCPKMT-202ENST00000395860 ADD1P35611 737 aaKnown RBP23.83■■□□□ 1.41
VCPKMT-202ENST00000395860 HIRAP54198 1017 aaPredicted RBP23.83■■□□□ 1.41
VCPKMT-202ENST00000395860 FANCBQ8NB91 859 aa23.83■■□□□ 1.41
VCPKMT-202ENST00000395860 DDX11Q96FC9 970 aa23.83■■□□□ 1.41
VCPKMT-202ENST00000395860 CCDC196A0A1B0GTZ2 297 aa23.83■■□□□ 1.4
VCPKMT-202ENST00000395860 GLTPD2A6NH11 291 aa23.83■■□□□ 1.4
VCPKMT-202ENST00000395860 PPP2R5BQ15173 497 aa23.83■■□□□ 1.4
VCPKMT-202ENST00000395860 PNMA1Q8ND90 353 aa23.83■■□□□ 1.4
VCPKMT-202ENST00000395860 L3MBTL3Q96JM7 780 aaPredicted RBP23.83■■□□□ 1.4
VCPKMT-202ENST00000395860 TMEM47Q9BQJ4 181 aa23.83■■□□□ 1.4
VCPKMT-202ENST00000395860 DEFB129Q9H1M3 183 aa23.83■■□□□ 1.4
VCPKMT-202ENST00000395860 MTMR4Q9NYA4 1195 aa23.83■■□□□ 1.4
VCPKMT-202ENST00000395860 GGA3Q9NZ52 723 aa23.83■■□□□ 1.4
VCPKMT-202ENST00000395860 POLR2AP24928 1970 aaKnown RBP23.83■■□□□ 1.4
VCPKMT-202ENST00000395860 IGKV6D-41A0A0C4DH26 115 aa23.82■■□□□ 1.4
VCPKMT-202ENST00000395860 TBC1D12O60347 775 aa23.82■■□□□ 1.4
VCPKMT-202ENST00000395860 CDKL5O76039 1030 aa23.82■■□□□ 1.4
VCPKMT-202ENST00000395860 TROAPQ12815 778 aa23.82■■□□□ 1.4
VCPKMT-202ENST00000395860 PKP1Q13835 747 aa23.82■■□□□ 1.4
VCPKMT-202ENST00000395860 FAM184AQ8NB25 1140 aa23.82■■□□□ 1.4
VCPKMT-202ENST00000395860 FAM217BQ9NTX9 383 aaPredicted RBP23.82■■□□□ 1.4
VCPKMT-202ENST00000395860 SCN4AP35499 1836 aa23.81■■□□□ 1.4
VCPKMT-202ENST00000395860 ABCB5Q2M3G0 1257 aa23.81■■□□□ 1.4
VCPKMT-202ENST00000395860 MIGA2Q7L4E1 593 aa23.81■■□□□ 1.4
VCPKMT-202ENST00000395860 TEPSINQ96N21 525 aa23.81■■□□□ 1.4
VCPKMT-202ENST00000395860 GDF11O95390 407 aa23.8■■□□□ 1.4
VCPKMT-202ENST00000395860 TOP1P11387 765 aaKnown RBP23.8■■□□□ 1.4
VCPKMT-202ENST00000395860 NOVP48745 357 aa23.8■■□□□ 1.4
VCPKMT-202ENST00000395860 RAB3GAP1Q15042 981 aa23.8■■□□□ 1.4
VCPKMT-202ENST00000395860 PPP4R3BQ5MIZ7 849 aa23.8■■□□□ 1.4
VCPKMT-202ENST00000395860 KIF3AQ9Y496 699 aa23.8■■□□□ 1.4
VCPKMT-202ENST00000395860 MYH6P13533 1939 aa23.8■■□□□ 1.4
VCPKMT-202ENST00000395860 PPFIA3O75145 1194 aa23.8■■□□□ 1.4
VCPKMT-202ENST00000395860 TTLL1O95922 423 aa23.8■■□□□ 1.4
VCPKMT-202ENST00000395860 PDCP20941 246 aa23.8■■□□□ 1.4
VCPKMT-202ENST00000395860 SYT1P21579 422 aa23.8■■□□□ 1.4
VCPKMT-202ENST00000395860 LARP1BQ659C4 914 aaKnown RBP23.8■■□□□ 1.4
VCPKMT-202ENST00000395860 TMEM179Q6ZVK1 233 aa23.8■■□□□ 1.4
VCPKMT-202ENST00000395860 CTCFLQ8NI51 663 aaPredicted RBP23.8■■□□□ 1.4
VCPKMT-202ENST00000395860 CABP5Q9NP86 173 aa23.8■■□□□ 1.4
VCPKMT-202ENST00000395860 RBM28Q9NW13 759 aaKnown RBP23.8■■□□□ 1.4
VCPKMT-202ENST00000395860 ATAD5Q96QE3 1844 aa23.79■■□□□ 1.4
VCPKMT-202ENST00000395860 PITPNM2Q9BZ72 1349 aa23.78■■□□□ 1.4
VCPKMT-202ENST00000395860 STX6O43752 255 aa23.78■■□□□ 1.4
VCPKMT-202ENST00000395860 NTRK3Q16288 839 aa23.78■■□□□ 1.4
VCPKMT-202ENST00000395860 CLEC10AQ8IUN9 316 aa23.78■■□□□ 1.4
VCPKMT-202ENST00000395860 MAP3K10Q02779 954 aa23.78■■□□□ 1.4
VCPKMT-202ENST00000395860 RRP1BQ14684 758 aaKnown RBP23.78■■□□□ 1.4
VCPKMT-202ENST00000395860 SHROOM1Q2M3G4 852 aaPredicted RBP23.78■■□□□ 1.4
VCPKMT-202ENST00000395860 KANSL2Q9H9L4 492 aa23.78■■□□□ 1.4
VCPKMT-202ENST00000395860 ORC3Q9UBD5 711 aaPredicted RBP23.78■■□□□ 1.4
VCPKMT-202ENST00000395860 CLIP2Q9UDT6 1046 aa23.78■■□□□ 1.4
VCPKMT-202ENST00000395860 WDR33Q9C0J8 1336 aaKnown RBP23.77■■□□□ 1.4
VCPKMT-202ENST00000395860 PDIA4P13667 645 aaKnown RBP23.77■■□□□ 1.4
VCPKMT-202ENST00000395860 IFNAR1P17181 557 aa23.77■■□□□ 1.4
VCPKMT-202ENST00000395860 KIF5BP33176 963 aa23.77■■□□□ 1.4
VCPKMT-202ENST00000395860 MAP3K14Q99558 947 aa23.77■■□□□ 1.4
VCPKMT-202ENST00000395860 MTMR7Q9Y216 660 aa23.77■■□□□ 1.4
VCPKMT-202ENST00000395860 PPP2R3BQ9Y5P8 575 aa23.77■■□□□ 1.4
VCPKMT-202ENST00000395860 WDR90Q96KV7 1748 aa23.76■■□□□ 1.39
VCPKMT-202ENST00000395860 BRD1O95696 1058 aa23.76■■□□□ 1.39
VCPKMT-202ENST00000395860 GH2P01242 217 aa23.76■■□□□ 1.39
VCPKMT-202ENST00000395860 FDPSP14324 419 aaKnown RBP23.76■■□□□ 1.39
VCPKMT-202ENST00000395860 EPHX2P34913 555 aa23.76■■□□□ 1.39
VCPKMT-202ENST00000395860 ATP2B2Q01814 1243 aa23.76■■□□□ 1.39
VCPKMT-202ENST00000395860 SEPT2Q15019 361 aa23.76■■□□□ 1.39
VCPKMT-202ENST00000395860 USP50Q70EL3 339 aaPredicted RBP23.76■■□□□ 1.39
VCPKMT-202ENST00000395860 PHKBQ93100 1093 aa23.76■■□□□ 1.39
VCPKMT-202ENST00000395860 ZDHHC9Q9Y397 364 aa23.76■■□□□ 1.39
VCPKMT-202ENST00000395860 SSRP1Q08945 709 aaKnown RBP23.75■■□□□ 1.39
VCPKMT-202ENST00000395860 GRM4Q14833 912 aa23.75■■□□□ 1.39
VCPKMT-202ENST00000395860 NBPF12Q5TAG4 269 aaPredicted RBP23.75■■□□□ 1.39
VCPKMT-202ENST00000395860 LRRC47Q8N1G4 583 aaKnown RBP23.75■■□□□ 1.39
VCPKMT-202ENST00000395860 TNPO1Q92973 898 aaKnown RBP23.75■■□□□ 1.39
VCPKMT-202ENST00000395860 DCPSQ96C86 337 aaKnown RBP23.75■■□□□ 1.39
VCPKMT-202ENST00000395860 HOOK2Q96ED9 719 aa23.75■■□□□ 1.39
VCPKMT-202ENST00000395860 VPS37CA5D8V6 355 aaPredicted RBP23.75■■□□□ 1.39
VCPKMT-202ENST00000395860 IQCA1LA6NCM1 817 aa23.75■■□□□ 1.39
VCPKMT-202ENST00000395860 GUCY1A2P33402 732 aa23.75■■□□□ 1.39
VCPKMT-202ENST00000395860 ICA1Q05084 483 aa23.75■■□□□ 1.39
VCPKMT-202ENST00000395860 FOXD4L5Q5VV16 416 aaPredicted RBP23.75■■□□□ 1.39
VCPKMT-202ENST00000395860 TRIM22Q8IYM9 498 aa23.75■■□□□ 1.39
VCPKMT-202ENST00000395860 CMTR1Q8N1G2 835 aaKnown RBP23.75■■□□□ 1.39
VCPKMT-202ENST00000395860 CCDC82Q8N4S0 544 aa23.75■■□□□ 1.39
VCPKMT-202ENST00000395860 FOXD4L4Q8WXT5 416 aaPredicted RBP23.75■■□□□ 1.39
VCPKMT-202ENST00000395860 SLC26A6Q9BXS9 759 aa23.75■■□□□ 1.39
VCPKMT-202ENST00000395860 NYAP2Q9P242 653 aa23.75■■□□□ 1.39
VCPKMT-202ENST00000395860 FMNL1O95466 1100 aaPredicted RBP23.74■■□□□ 1.39
VCPKMT-202ENST00000395860 EEF2P13639 858 aaKnown RBP23.74■■□□□ 1.39
VCPKMT-202ENST00000395860 JAG1P78504 1218 aa23.74■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms