RNA–Protein interactions for RNA: ENST00000395577.2

CDKN3-203, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 5 BASIC

Gene CDKN3, Length 637 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-203ENST00000395577 KLHL6Q8WZ60 621 aa8.13□□□□□ -1.11
CDKN3-203ENST00000395577 DHRS1Q96LJ7 313 aa8.13□□□□□ -1.11
CDKN3-203ENST00000395577 SLC6A18Q96N87 628 aa8.13□□□□□ -1.11
CDKN3-203ENST00000395577 ZMYM5Q9UJ78 669 aa8.13□□□□□ -1.11
CDKN3-203ENST00000395577 CC2D2AQ9P2K1 1620 aa8.13□□□□□ -1.11
CDKN3-203ENST00000395577 CECR2Q9BXF3 1484 aa8.13□□□□□ -1.11
CDKN3-203ENST00000395577 SUSD5O60279 629 aa8.12□□□□□ -1.11
CDKN3-203ENST00000395577 UBOX5O94941 541 aa8.12□□□□□ -1.11
CDKN3-203ENST00000395577 ALX3O95076 343 aa8.12□□□□□ -1.11
CDKN3-203ENST00000395577 CAP2P40123 477 aa8.12□□□□□ -1.11
CDKN3-203ENST00000395577 BBS9Q3SYG4 887 aa8.12□□□□□ -1.11
CDKN3-203ENST00000395577 C2orf27AQ580R0 203 aa8.12□□□□□ -1.11
CDKN3-203ENST00000395577 PLEKHG4Q58EX7 1191 aa8.12□□□□□ -1.11
CDKN3-203ENST00000395577 PODNQ7Z5L7 613 aa8.12□□□□□ -1.11
CDKN3-203ENST00000395577 HOMER1Q86YM7 354 aa8.12□□□□□ -1.11
CDKN3-203ENST00000395577 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.12□□□□□ -1.11
CDKN3-203ENST00000395577 TMEM192Q8IY95 271 aa8.12□□□□□ -1.11
CDKN3-203ENST00000395577 THAP3Q8WTV1 239 aaPredicted RBP8.12□□□□□ -1.11
CDKN3-203ENST00000395577 CYB5D2Q8WUJ1 264 aa8.12□□□□□ -1.11
CDKN3-203ENST00000395577 ZNF669Q96BR6 464 aaPredicted RBP8.12□□□□□ -1.11
CDKN3-203ENST00000395577 FOXQ1Q9C009 403 aa8.12□□□□□ -1.11
CDKN3-203ENST00000395577 SUCOQ9UBS9 1254 aaKnown RBP8.12□□□□□ -1.11
CDKN3-203ENST00000395577 ZCCHC6Q5VYS8 1495 aaKnown RBP8.12□□□□□ -1.11
CDKN3-203ENST00000395577 SART1O43290 800 aaKnown RBP8.11□□□□□ -1.11
CDKN3-203ENST00000395577 PMS1P54277 932 aaKnown RBP8.11□□□□□ -1.11
CDKN3-203ENST00000395577 XAGE3Q8WTP9 111 aa8.11□□□□□ -1.11
CDKN3-203ENST00000395577 AKTIPQ9H8T0 292 aa8.11□□□□□ -1.11
CDKN3-203ENST00000395577 TMEM260Q9NX78 707 aa8.11□□□□□ -1.11
CDKN3-203ENST00000395577 USP21Q9UK80 565 aa8.11□□□□□ -1.11
CDKN3-203ENST00000395577 PCOLCE2Q9UKZ9 415 aa8.11□□□□□ -1.11
CDKN3-203ENST00000395577 LEMD3Q9Y2U8 911 aa8.11□□□□□ -1.11
CDKN3-203ENST00000395577 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.1□□□□□ -1.11
CDKN3-203ENST00000395577 CLEC3AO75596 197 aa8.1□□□□□ -1.11
CDKN3-203ENST00000395577 LRIG2O94898 1065 aa8.1□□□□□ -1.11
CDKN3-203ENST00000395577 PREPP48147 710 aa8.1□□□□□ -1.11
CDKN3-203ENST00000395577 SQSTM1Q13501 440 aa8.1□□□□□ -1.11
CDKN3-203ENST00000395577 SLC10A6Q3KNW5 377 aa8.1□□□□□ -1.11
CDKN3-203ENST00000395577 LCE2AQ5TA79 106 aaPredicted RBP8.1□□□□□ -1.11
CDKN3-203ENST00000395577 TDRD10Q5VZ19 366 aaKnown RBP8.1□□□□□ -1.11
CDKN3-203ENST00000395577 PPFIBP1Q86W92 1011 aa8.1□□□□□ -1.11
CDKN3-203ENST00000395577 JMYQ8N9B5 988 aa8.1□□□□□ -1.11
CDKN3-203ENST00000395577 EPN3Q9H201 632 aa8.1□□□□□ -1.11
CDKN3-203ENST00000395577 FAM86C1Q9NVL1 165 aa8.1□□□□□ -1.11
CDKN3-203ENST00000395577 EIF4G1Q04637 1599 aaKnown RBP8.1□□□□□ -1.11
CDKN3-203ENST00000395577 GAS2O43903 313 aaKnown RBP8.09□□□□□ -1.11
CDKN3-203ENST00000395577 TP53P04637 393 aaPredicted RBP8.09□□□□□ -1.11
CDKN3-203ENST00000395577 GLB1P16278 677 aa8.09□□□□□ -1.11
CDKN3-203ENST00000395577 RAB6AP20340 208 aa8.09□□□□□ -1.11
CDKN3-203ENST00000395577 USP11P51784 963 aa8.09□□□□□ -1.11
CDKN3-203ENST00000395577 ARMCX6Q7L4S7 300 aa8.09□□□□□ -1.11
CDKN3-203ENST00000395577 BEND7Q8N7W2 519 aaPredicted RBP8.09□□□□□ -1.11
CDKN3-203ENST00000395577 MFSD2AQ8NA29 543 aa8.09□□□□□ -1.11
CDKN3-203ENST00000395577 LENG1Q96BZ8 264 aaPredicted RBP8.09□□□□□ -1.11
CDKN3-203ENST00000395577 CEP41Q9BYV8 373 aa8.09□□□□□ -1.11
CDKN3-203ENST00000395577 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8.09□□□□□ -1.11
CDKN3-203ENST00000395577 PTCH2Q9Y6C5 1203 aa8.09□□□□□ -1.11
CDKN3-203ENST00000395577 CNTNAP5Q8WYK1 1306 aa8.08□□□□□ -1.12
CDKN3-203ENST00000395577 SPATA31C1P0DKV0 1188 aa8.08□□□□□ -1.12
CDKN3-203ENST00000395577 NAT2P11245 290 aa8.08□□□□□ -1.12
CDKN3-203ENST00000395577 LRRC47Q8N1G4 583 aaKnown RBP8.08□□□□□ -1.12
CDKN3-203ENST00000395577 SPATA9Q9BWV2 254 aa8.08□□□□□ -1.12
CDKN3-203ENST00000395577 SLKQ9H2G2 1235 aaPredicted RBP8.08□□□□□ -1.12
CDKN3-203ENST00000395577 ACSS3Q9H6R3 686 aa8.08□□□□□ -1.12
CDKN3-203ENST00000395577 CWC22Q9HCG8 908 aaKnown RBP8.08□□□□□ -1.12
CDKN3-203ENST00000395577 IQCA1LA6NCM1 817 aa8.07□□□□□ -1.12
CDKN3-203ENST00000395577 C9IYK1 514 aa8.07□□□□□ -1.12
CDKN3-203ENST00000395577 C9orf172C9J069 976 aa8.07□□□□□ -1.12
CDKN3-203ENST00000395577 SV2CQ496J9 727 aa8.07□□□□□ -1.12
CDKN3-203ENST00000395577 RNF187Q5TA31 235 aaPredicted RBP8.07□□□□□ -1.12
CDKN3-203ENST00000395577 CDPF1Q6NVV7 123 aa8.07□□□□□ -1.12
CDKN3-203ENST00000395577 C16orf86Q6ZW13 317 aa8.07□□□□□ -1.12
CDKN3-203ENST00000395577 CCDC144CPQ8IYA2 1237 aa8.07□□□□□ -1.12
CDKN3-203ENST00000395577 ANKRD13AQ8IZ07 590 aa8.07□□□□□ -1.12
CDKN3-203ENST00000395577 PPP1R13LQ8WUF5 828 aa8.07□□□□□ -1.12
CDKN3-203ENST00000395577 SMARCC1Q92922 1105 aaPredicted RBP8.07□□□□□ -1.12
CDKN3-203ENST00000395577 ZNF512BQ96KM6 892 aaPredicted RBP8.07□□□□□ -1.12
CDKN3-203ENST00000395577 DAGLAQ9Y4D2 1042 aa8.07□□□□□ -1.12
CDKN3-203ENST00000395577 ANKRD34BA5PLL1 514 aa8.06□□□□□ -1.12
CDKN3-203ENST00000395577 AGRPO00253 132 aa8.06□□□□□ -1.12
CDKN3-203ENST00000395577 FAM153BP0C7A2 387 aa8.06□□□□□ -1.12
CDKN3-203ENST00000395577 ZNF143P52747 638 aaPredicted RBP8.06□□□□□ -1.12
CDKN3-203ENST00000395577 NRG1Q02297 640 aaPredicted RBP8.06□□□□□ -1.12
CDKN3-203ENST00000395577 HEATR6Q6AI08 1181 aaKnown RBP8.06□□□□□ -1.12
CDKN3-203ENST00000395577 Q6ZS46 218 aa8.06□□□□□ -1.12
CDKN3-203ENST00000395577 ZSWIM2Q8NEG5 633 aa8.06□□□□□ -1.12
CDKN3-203ENST00000395577 NACC1Q96RE7 527 aa8.06□□□□□ -1.12
CDKN3-203ENST00000395577 APBA2Q99767 749 aa8.06□□□□□ -1.12
CDKN3-203ENST00000395577 MIPEPQ99797 713 aa8.06□□□□□ -1.12
CDKN3-203ENST00000395577 YIPF2Q9BWQ6 316 aa8.06□□□□□ -1.12
CDKN3-203ENST00000395577 LGR6Q9HBX8 967 aa8.06□□□□□ -1.12
CDKN3-203ENST00000395577 CEP131Q9UPN4 1083 aa8.06□□□□□ -1.12
CDKN3-203ENST00000395577 APBA3O96018 575 aa8.05□□□□□ -1.12
CDKN3-203ENST00000395577 EPHX1P07099 455 aa8.05□□□□□ -1.12
CDKN3-203ENST00000395577 NFICP08651 508 aa8.05□□□□□ -1.12
CDKN3-203ENST00000395577 IREB2P48200 963 aaKnown RBP8.05□□□□□ -1.12
CDKN3-203ENST00000395577 AXDND1Q5T1B0 1012 aaPredicted RBP8.05□□□□□ -1.12
CDKN3-203ENST00000395577 KIAA0907Q7Z7F0 614 aaPredicted RBP8.05□□□□□ -1.12
CDKN3-203ENST00000395577 ZBTB38Q8NAP3 1195 aaPredicted RBP8.05□□□□□ -1.12
CDKN3-203ENST00000395577 FBLIM1Q8WUP2 373 aa8.05□□□□□ -1.12
CDKN3-203ENST00000395577 WFDC12Q8WWY7 111 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 98.5 ms