RNA–Protein interactions for RNA: ENST00000395185.7

HERC4-203, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 4

Gene HERC4, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-203ENST00000395185 TBC1D8O95759 1140 aa10.04□□□□□ -0.8
HERC4-203ENST00000395185 INPP5BP32019 993 aa10.04□□□□□ -0.8
HERC4-203ENST00000395185 EXOSC10Q01780 885 aaKnown RBP10.04□□□□□ -0.8
HERC4-203ENST00000395185 COL9A3Q14050 684 aaPredicted RBP10.04□□□□□ -0.8
HERC4-203ENST00000395185 KRT32Q14532 448 aa10.04□□□□□ -0.8
HERC4-203ENST00000395185 CCL15Q16663 113 aa10.04□□□□□ -0.8
HERC4-203ENST00000395185 ADCK5Q3MIX3 580 aa10.04□□□□□ -0.8
HERC4-203ENST00000395185 NOL9Q5SY16 702 aaKnown RBP10.04□□□□□ -0.8
HERC4-203ENST00000395185 CTR9Q6PD62 1173 aa10.04□□□□□ -0.8
HERC4-203ENST00000395185 SH3BP5LQ7L8J4 393 aa10.04□□□□□ -0.8
HERC4-203ENST00000395185 FBXL16Q8N461 479 aa10.04□□□□□ -0.8
HERC4-203ENST00000395185 SDR42E1Q8WUS8 393 aa10.04□□□□□ -0.8
HERC4-203ENST00000395185 TTC14Q96N46 770 aa10.04□□□□□ -0.8
HERC4-203ENST00000395185 NACAP1Q9BZK3 213 aa10.04□□□□□ -0.8
HERC4-203ENST00000395185 ZFYVE28Q9HCC9 887 aa10.04□□□□□ -0.8
HERC4-203ENST00000395185 GINM1Q9NU53 330 aa10.04□□□□□ -0.8
HERC4-203ENST00000395185 SNCAIPQ9Y6H5 919 aa10.04□□□□□ -0.8
HERC4-203ENST00000395185 PAPPA2Q9BXP8 1791 aa10.03□□□□□ -0.8
HERC4-203ENST00000395185 IRF6O14896 467 aa10.03□□□□□ -0.8
HERC4-203ENST00000395185 ZKSCAN1P17029 563 aaPredicted RBP10.03□□□□□ -0.8
HERC4-203ENST00000395185 NOM1Q5C9Z4 860 aaKnown RBP10.03□□□□□ -0.8
HERC4-203ENST00000395185 C12orf60Q5U649 245 aa10.03□□□□□ -0.8
HERC4-203ENST00000395185 LHX8Q68G74 356 aa10.03□□□□□ -0.8
HERC4-203ENST00000395185 MS4A4AQ96JQ5 239 aa10.03□□□□□ -0.8
HERC4-203ENST00000395185 AS3MTQ9HBK9 375 aa10.03□□□□□ -0.8
HERC4-203ENST00000395185 ZCCHC17Q9NP64 241 aaKnown RBP10.03□□□□□ -0.8
HERC4-203ENST00000395185 SAP30BPQ9UHR5 308 aaKnown RBP10.03□□□□□ -0.8
HERC4-203ENST00000395185 FLT1P17948 1338 aa10.03□□□□□ -0.8
HERC4-203ENST00000395185 PSME4Q14997 1843 aa10.03□□□□□ -0.8
HERC4-203ENST00000395185 ATRNL1Q5VV63 1379 aa10.02□□□□□ -0.8
HERC4-203ENST00000395185 MYH7P12883 1935 aa10.02□□□□□ -0.81
HERC4-203ENST00000395185 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.02□□□□□ -0.81
HERC4-203ENST00000395185 USP17L12C9JPN9 530 aa10.02□□□□□ -0.81
HERC4-203ENST00000395185 USP17L21D6R901 530 aa10.02□□□□□ -0.81
HERC4-203ENST00000395185 E7EWF7 191 aa10.02□□□□□ -0.81
HERC4-203ENST00000395185 GPR25O00155 361 aa10.02□□□□□ -0.81
HERC4-203ENST00000395185 ZNF213O14771 459 aa10.02□□□□□ -0.81
HERC4-203ENST00000395185 FKTNO75072 461 aa10.02□□□□□ -0.81
HERC4-203ENST00000395185 ASNSP08243 561 aa10.02□□□□□ -0.81
HERC4-203ENST00000395185 PTPRAP18433 802 aa10.02□□□□□ -0.81
HERC4-203ENST00000395185 GJA5P36382 358 aa10.02□□□□□ -0.81
HERC4-203ENST00000395185 CAP2P40123 477 aa10.02□□□□□ -0.81
HERC4-203ENST00000395185 NT5C2P49902 561 aa10.02□□□□□ -0.81
HERC4-203ENST00000395185 IMMTQ16891 758 aaKnown RBP10.02□□□□□ -0.81
HERC4-203ENST00000395185 METTL16Q86W50 562 aaKnown RBP10.02□□□□□ -0.81
HERC4-203ENST00000395185 NKX2-3Q8TAU0 364 aa10.02□□□□□ -0.81
HERC4-203ENST00000395185 ZFP91Q96JP5 570 aaPredicted RBP10.02□□□□□ -0.81
HERC4-203ENST00000395185 CFHR5Q9BXR6 569 aa10.02□□□□□ -0.81
HERC4-203ENST00000395185 AGXT2Q9BYV1 514 aa10.02□□□□□ -0.81
HERC4-203ENST00000395185 NAPBQ9H115 298 aa10.02□□□□□ -0.81
HERC4-203ENST00000395185 CABP5Q9NP86 173 aa10.02□□□□□ -0.81
HERC4-203ENST00000395185 MCM9Q9NXL9 1143 aa10.02□□□□□ -0.81
HERC4-203ENST00000395185 SERPINB13Q9UIV8 391 aa10.02□□□□□ -0.81
HERC4-203ENST00000395185 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.02□□□□□ -0.81
HERC4-203ENST00000395185 USP17L5A8MUK1 530 aa10.01□□□□□ -0.81
HERC4-203ENST00000395185 SMIM22K7EJ46 135 aa10.01□□□□□ -0.81
HERC4-203ENST00000395185 CD2BP2O95400 341 aaKnown RBP10.01□□□□□ -0.81
HERC4-203ENST00000395185 APPP05067 770 aa10.01□□□□□ -0.81
HERC4-203ENST00000395185 PCP11498 1178 aaKnown RBP10.01□□□□□ -0.81
HERC4-203ENST00000395185 PSMA5P28066 241 aa10.01□□□□□ -0.81
HERC4-203ENST00000395185 EVCP57679 992 aa10.01□□□□□ -0.81
HERC4-203ENST00000395185 GABPAQ06546 454 aa10.01□□□□□ -0.81
HERC4-203ENST00000395185 PPARAQ07869 468 aa10.01□□□□□ -0.81
HERC4-203ENST00000395185 PABPC4Q13310 644 aaKnown RBP eCLIP10.01□□□□□ -0.81
HERC4-203ENST00000395185 KIF22Q14807 665 aa10.01□□□□□ -0.81
HERC4-203ENST00000395185 TAF1CQ15572 869 aaPredicted RBP10.01□□□□□ -0.81
HERC4-203ENST00000395185 PKN2Q16513 984 aaKnown RBP10.01□□□□□ -0.81
HERC4-203ENST00000395185 AKNAD1Q5T1N1 836 aa10.01□□□□□ -0.81
HERC4-203ENST00000395185 RUFY3Q7L099 469 aa10.01□□□□□ -0.81
HERC4-203ENST00000395185 TBC1D10CQ8IV04 446 aa10.01□□□□□ -0.81
HERC4-203ENST00000395185 ZNF280CQ8ND82 737 aa10.01□□□□□ -0.81
HERC4-203ENST00000395185 STAG1Q8WVM7 1258 aa10.01□□□□□ -0.81
HERC4-203ENST00000395185 BRI3BPQ8WY22 251 aa10.01□□□□□ -0.81
HERC4-203ENST00000395185 NEK1Q96PY6 1258 aa10.01□□□□□ -0.81
HERC4-203ENST00000395185 KCNH4Q9UQ05 1017 aa10.01□□□□□ -0.81
HERC4-203ENST00000395185 WDR19Q8NEZ3 1342 aa10.01□□□□□ -0.81
HERC4-203ENST00000395185 SSC5DA1L4H1 1573 aa10.01□□□□□ -0.81
HERC4-203ENST00000395185 BTBD19C9JJ37 291 aa10□□□□□ -0.81
HERC4-203ENST00000395185 IGF2BP3O00425 579 aaKnown RBP eCLIP10□□□□□ -0.81
HERC4-203ENST00000395185 ORC4O43929 436 aa10□□□□□ -0.81
HERC4-203ENST00000395185 HMGB1P09429 215 aaKnown RBP10□□□□□ -0.81
HERC4-203ENST00000395185 RPS6KB1P23443 525 aa10□□□□□ -0.81
HERC4-203ENST00000395185 NEK4P51957 841 aa10□□□□□ -0.81
HERC4-203ENST00000395185 SP3Q02447 781 aa10□□□□□ -0.81
HERC4-203ENST00000395185 SPP2Q13103 211 aa10□□□□□ -0.81
HERC4-203ENST00000395185 DGKZQ13574 1117 aa10□□□□□ -0.81
HERC4-203ENST00000395185 CERKLQ49MI3 558 aaPredicted RBP10□□□□□ -0.81
HERC4-203ENST00000395185 DHX32Q7L7V1 743 aaKnown RBP10□□□□□ -0.81
HERC4-203ENST00000395185 CTU1Q7Z7A3 348 aaKnown RBP10□□□□□ -0.81
HERC4-203ENST00000395185 ANKRD23Q86SG2 305 aa10□□□□□ -0.81
HERC4-203ENST00000395185 MB21D2Q8IYB1 491 aaPredicted RBP10□□□□□ -0.81
HERC4-203ENST00000395185 ERO1AQ96HE7 468 aa10□□□□□ -0.81
HERC4-203ENST00000395185 JAKMIP1Q96N16 626 aaKnown RBP10□□□□□ -0.81
HERC4-203ENST00000395185 PTPN18Q99952 460 aa10□□□□□ -0.81
HERC4-203ENST00000395185 MTA3Q9BTC8 594 aa10□□□□□ -0.81
HERC4-203ENST00000395185 EHD4Q9H223 541 aa10□□□□□ -0.81
HERC4-203ENST00000395185 TMOD4Q9NZQ9 345 aa10□□□□□ -0.81
HERC4-203ENST00000395185 ARPP21Q9UBL0 812 aaPredicted RBP10□□□□□ -0.81
HERC4-203ENST00000395185 SWAP70Q9UH65 585 aa10□□□□□ -0.81
HERC4-203ENST00000395185 AFG3L2Q9Y4W6 797 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms