RNA–Protein interactions for RNA: ENST00000394181.6

CLDND1-203, Transcript of claudin domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene CLDND1, Length 2,170 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-203ENST00000394181 STAG2Q8N3U4 1231 aa22.08■■□□□ 1.12
CLDND1-203ENST00000394181 PIBF1Q8WXW3 757 aa22.08■■□□□ 1.12
CLDND1-203ENST00000394181 WASF1Q92558 559 aa22.08■■□□□ 1.12
CLDND1-203ENST00000394181 TMEM47Q9BQJ4 181 aa22.08■■□□□ 1.12
CLDND1-203ENST00000394181 OSBPL5Q9H0X9 879 aaPredicted RBP22.08■■□□□ 1.12
CLDND1-203ENST00000394181 RBM28Q9NW13 759 aaKnown RBP22.08■■□□□ 1.12
CLDND1-203ENST00000394181 PPP1R1BQ9UD71 204 aaPredicted RBP22.08■■□□□ 1.12
CLDND1-203ENST00000394181 MMP1P03956 469 aa22.07■■□□□ 1.12
CLDND1-203ENST00000394181 U2AF2P26368 475 aaKnown RBP eCLIP22.07■■□□□ 1.121e-8■■□□□ 13.8
CLDND1-203ENST00000394181 TCP10Q12799 353 aa22.07■■□□□ 1.12
CLDND1-203ENST00000394181 ATL3Q6DD88 541 aa22.07■■□□□ 1.12
CLDND1-203ENST00000394181 CTCFLQ8NI51 663 aaPredicted RBP22.07■■□□□ 1.12
CLDND1-203ENST00000394181 ISY1Q9ULR0 285 aaKnown RBP22.07■■□□□ 1.12
CLDND1-203ENST00000394181 FOCADQ5VW36 1801 aa22.07■■□□□ 1.12
CLDND1-203ENST00000394181 PRPF3O43395 683 aaKnown RBP22.06■■□□□ 1.12
CLDND1-203ENST00000394181 NR1I2O75469 434 aa22.06■■□□□ 1.12
CLDND1-203ENST00000394181 RGS22Q8NE09 1264 aa22.06■■□□□ 1.12
CLDND1-203ENST00000394181 NEDD1Q8NHV4 660 aa22.06■■□□□ 1.12
CLDND1-203ENST00000394181 OXER1Q8TDS5 423 aa22.06■■□□□ 1.12
CLDND1-203ENST00000394181 PSMD1Q99460 953 aa22.06■■□□□ 1.12
CLDND1-203ENST00000394181 ZNF287Q9HBT7 754 aa22.06■■□□□ 1.12
CLDND1-203ENST00000394181 VPS54Q9P1Q0 977 aa22.06■■□□□ 1.12
CLDND1-203ENST00000394181 GNL2Q13823 731 aaKnown RBP22.06■■□□□ 1.12
CLDND1-203ENST00000394181 LINC00301Q8NCQ3 95 aa22.06■■□□□ 1.12
CLDND1-203ENST00000394181 BICD2Q8TD16 824 aa22.06■■□□□ 1.12
CLDND1-203ENST00000394181 CEP95Q96GE4 821 aa22.06■■□□□ 1.12
CLDND1-203ENST00000394181 MRIQ9BWK5 157 aa22.06■■□□□ 1.12
CLDND1-203ENST00000394181 DACT1Q9NYF0 836 aa22.06■■□□□ 1.12
CLDND1-203ENST00000394181 CNTNAP5Q8WYK1 1306 aa22.06■■□□□ 1.12
CLDND1-203ENST00000394181 NR5A1Q13285 461 aa22.05■■□□□ 1.12
CLDND1-203ENST00000394181 CAMK4Q16566 473 aa22.05■■□□□ 1.12
CLDND1-203ENST00000394181 LARGE2Q8N3Y3 721 aa22.05■■□□□ 1.12
CLDND1-203ENST00000394181 ME1P48163 572 aa22.05■■□□□ 1.12
CLDND1-203ENST00000394181 AKAP17AQ02040 695 aaKnown RBP22.05■■□□□ 1.12
CLDND1-203ENST00000394181 SLC35G1Q2M3R5 365 aa22.05■■□□□ 1.12
CLDND1-203ENST00000394181 DIS3L2Q8IYB7 885 aaKnown RBP22.05■■□□□ 1.12
CLDND1-203ENST00000394181 MTFR1LQ9H019 292 aa22.05■■□□□ 1.12
CLDND1-203ENST00000394181 GOLPH3LQ9H4A5 285 aa22.05■■□□□ 1.12
CLDND1-203ENST00000394181 FAM198AQ9UFP1 575 aa22.05■■□□□ 1.12
CLDND1-203ENST00000394181 PCDHA7Q9UN72 937 aa22.05■■□□□ 1.12
CLDND1-203ENST00000394181 AKR1B1P15121 316 aa22.04■■□□□ 1.12
CLDND1-203ENST00000394181 CLEC10AQ8IUN9 316 aa22.04■■□□□ 1.12
CLDND1-203ENST00000394181 POLR3EQ9NVU0 708 aa22.04■■□□□ 1.12
CLDND1-203ENST00000394181 PIM2Q9P1W9 311 aa22.04■■□□□ 1.12
CLDND1-203ENST00000394181 MAD2L2Q9UI95 211 aa22.04■■□□□ 1.12
CLDND1-203ENST00000394181 SERPINA10Q9UK55 444 aa22.04■■□□□ 1.12
CLDND1-203ENST00000394181 BAZ2BQ9UIF8 2168 aaKnown RBP22.04■■□□□ 1.12
CLDND1-203ENST00000394181 HDLBPQ00341 1268 aaKnown RBP22.04■■□□□ 1.12
CLDND1-203ENST00000394181 ANO1Q5XXA6 986 aa22.04■■□□□ 1.12
CLDND1-203ENST00000394181 PRMT6Q96LA8 375 aaPredicted RBP22.04■■□□□ 1.12
CLDND1-203ENST00000394181 TDRD3Q9H7E2 651 aaKnown RBP22.04■■□□□ 1.12
CLDND1-203ENST00000394181 SERPINB13Q9UIV8 391 aa22.04■■□□□ 1.12
CLDND1-203ENST00000394181 ZBTB12Q9Y330 459 aaPredicted RBP22.04■■□□□ 1.12
CLDND1-203ENST00000394181 DDTLA6NHG4 134 aaPredicted RBP22.03■■□□□ 1.12
CLDND1-203ENST00000394181 PSMD14O00487 310 aa22.03■■□□□ 1.12
CLDND1-203ENST00000394181 SH3BP5LQ7L8J4 393 aa22.03■■□□□ 1.12
CLDND1-203ENST00000394181 FAM196BA6NMK8 535 aa22.02■■□□□ 1.12
CLDND1-203ENST00000394181 GOLGA8HP0CJ92 632 aa22.02■■□□□ 1.12
CLDND1-203ENST00000394181 SHMT1P34896 483 aa22.02■■□□□ 1.12
CLDND1-203ENST00000394181 NASPP49321 788 aaPredicted RBP22.02■■□□□ 1.12
CLDND1-203ENST00000394181 NT5C2P49902 561 aa22.02■■□□□ 1.12
CLDND1-203ENST00000394181 TGFB2P61812 414 aa22.02■■□□□ 1.12
CLDND1-203ENST00000394181 STK38Q15208 465 aa22.02■■□□□ 1.12
CLDND1-203ENST00000394181 SF3A1Q15459 793 aaKnown RBP22.02■■□□□ 1.12
CLDND1-203ENST00000394181 CFAP100Q494V2 611 aa22.02■■□□□ 1.12
CLDND1-203ENST00000394181 NOSTRINQ8IVI9 506 aa22.02■■□□□ 1.12
CLDND1-203ENST00000394181 CCAR1Q8IX12 1150 aaKnown RBP22.02■■□□□ 1.12
CLDND1-203ENST00000394181 POLD1P28340 1107 aa22.02■■□□□ 1.12
CLDND1-203ENST00000394181 GRM4Q14833 912 aa22.02■■□□□ 1.12
CLDND1-203ENST00000394181 GRIPAP1Q4V328 841 aa22.02■■□□□ 1.12
CLDND1-203ENST00000394181 CCDC178Q5BJE1 867 aa22.02■■□□□ 1.12
CLDND1-203ENST00000394181 KLHL34Q8N239 644 aa22.02■■□□□ 1.12
CLDND1-203ENST00000394181 CPVLQ9H3G5 476 aa22.02■■□□□ 1.12
CLDND1-203ENST00000394181 SRCAPQ6ZRS2 3230 aa22.01■■□□□ 1.11
CLDND1-203ENST00000394181 KIF13BQ9NQT8 1826 aa22.01■■□□□ 1.11
CLDND1-203ENST00000394181 TOB1P50616 345 aaPredicted RBP22.01■■□□□ 1.11
CLDND1-203ENST00000394181 EIF6P56537 245 aaKnown RBP22.01■■□□□ 1.11
CLDND1-203ENST00000394181 RNF214Q8ND24 703 aa22.01■■□□□ 1.11
CLDND1-203ENST00000394181 MAP3K14Q99558 947 aa22.01■■□□□ 1.11
CLDND1-203ENST00000394181 DNAJC18Q9H819 358 aa22.01■■□□□ 1.11
CLDND1-203ENST00000394181 PSDA5PKW4 1024 aaPredicted RBP22.01■■□□□ 1.11
CLDND1-203ENST00000394181 ADAMTS3O15072 1205 aa22.01■■□□□ 1.11
CLDND1-203ENST00000394181 SPTLC2O15270 562 aa22.01■■□□□ 1.11
CLDND1-203ENST00000394181 MARCKSP29966 332 aaPredicted RBP22.01■■□□□ 1.11
CLDND1-203ENST00000394181 KIF5BP33176 963 aa22.01■■□□□ 1.11
CLDND1-203ENST00000394181 SAFBQ15424 915 aaKnown RBP eCLIP22.01■■□□□ 1.11
CLDND1-203ENST00000394181 SHROOM1Q2M3G4 852 aaPredicted RBP22.01■■□□□ 1.11
CLDND1-203ENST00000394181 RSBN1LQ6PCB5 846 aaPredicted RBP22.01■■□□□ 1.11
CLDND1-203ENST00000394181 FAM205CA6NFA0 338 aa22■■□□□ 1.11
CLDND1-203ENST00000394181 EARS2Q5JPH6 523 aaKnown RBP22■■□□□ 1.11
CLDND1-203ENST00000394181 PHF20Q9BVI0 1012 aa22■■□□□ 1.11
CLDND1-203ENST00000394181 IDI2Q9BXS1 227 aa22■■□□□ 1.11
CLDND1-203ENST00000394181 TSPY26PQ9H489 355 aa22■■□□□ 1.11
CLDND1-203ENST00000394181 CYTH3O43739 400 aa21.99■■□□□ 1.11
CLDND1-203ENST00000394181 YEATS4O95619 227 aa21.99■■□□□ 1.11
CLDND1-203ENST00000394181 VIL1P09327 827 aaKnown RBP21.99■■□□□ 1.11
CLDND1-203ENST00000394181 NOVP48745 357 aa21.99■■□□□ 1.11
CLDND1-203ENST00000394181 NOM1Q5C9Z4 860 aaKnown RBP21.99■■□□□ 1.11
CLDND1-203ENST00000394181 DALRD3Q5D0E6 543 aaKnown RBP21.99■■□□□ 1.11
CLDND1-203ENST00000394181 GMLQ99445 158 aa21.99■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms