RNA–Protein interactions for RNA: ENST00000394092.6

SMAD1-202, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD1, Length 1,658 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-202ENST00000394092 MAP7D2Q96T17 732 aa8.26□□□□□ -1.09
SMAD1-202ENST00000394092 DCP1AQ9NPI6 582 aaPredicted RBP8.26□□□□□ -1.09
SMAD1-202ENST00000394092 AATFQ9NY61 560 aaKnown RBP eCLIP8.26□□□□□ -1.09
SMAD1-202ENST00000394092 KCNH3Q9ULD8 1083 aa8.26□□□□□ -1.09
SMAD1-202ENST00000394092 PYCARDQ9ULZ3 195 aa8.26□□□□□ -1.09
SMAD1-202ENST00000394092 USP17L12C9JPN9 530 aa8.25□□□□□ -1.09
SMAD1-202ENST00000394092 USP17L21D6R901 530 aa8.25□□□□□ -1.09
SMAD1-202ENST00000394092 BAG3O95817 575 aa8.25□□□□□ -1.09
SMAD1-202ENST00000394092 LDHBP07195 334 aaKnown RBP8.25□□□□□ -1.09
SMAD1-202ENST00000394092 LDHCP07864 332 aa8.25□□□□□ -1.09
SMAD1-202ENST00000394092 PTPREP23469 700 aa8.25□□□□□ -1.09
SMAD1-202ENST00000394092 GUCY1A2P33402 732 aa8.25□□□□□ -1.09
SMAD1-202ENST00000394092 KCNQ4P56696 695 aa8.25□□□□□ -1.09
SMAD1-202ENST00000394092 C15orf52Q6ZUT6 534 aaKnown RBP8.25□□□□□ -1.09
SMAD1-202ENST00000394092 TMTC3Q6ZXV5 915 aa8.25□□□□□ -1.09
SMAD1-202ENST00000394092 ANKIB1Q9P2G1 1089 aa8.25□□□□□ -1.09
SMAD1-202ENST00000394092 TAOK2Q9UL54 1235 aa8.25□□□□□ -1.09
SMAD1-202ENST00000394092 ROBO3Q96MS0 1386 aa8.25□□□□□ -1.09
SMAD1-202ENST00000394092 FOCADQ5VW36 1801 aa8.25□□□□□ -1.09
SMAD1-202ENST00000394092 LRRC37AA6NMS7 1700 aa8.25□□□□□ -1.09
SMAD1-202ENST00000394092 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.24□□□□□ -1.09
SMAD1-202ENST00000394092 TRIM75PA6NK02 468 aa8.24□□□□□ -1.09
SMAD1-202ENST00000394092 TSPY2A6NKD2 308 aa8.24□□□□□ -1.09
SMAD1-202ENST00000394092 ATMINO43313 823 aaPredicted RBP8.24□□□□□ -1.09
SMAD1-202ENST00000394092 PRDX5P30044 214 aa8.24□□□□□ -1.09
SMAD1-202ENST00000394092 GTF2F1P35269 517 aaKnown RBP eCLIP8.24□□□□□ -1.09
SMAD1-202ENST00000394092 ST5P78524 1137 aa8.24□□□□□ -1.09
SMAD1-202ENST00000394092 MYL5Q02045 173 aa8.24□□□□□ -1.09
SMAD1-202ENST00000394092 TROAPQ12815 778 aa8.24□□□□□ -1.09
SMAD1-202ENST00000394092 MEX3CQ5U5Q3 659 aaKnown RBP8.24□□□□□ -1.09
SMAD1-202ENST00000394092 LRRC8AQ8IWT6 810 aa8.24□□□□□ -1.09
SMAD1-202ENST00000394092 TRIML1Q8N9V2 468 aa8.24□□□□□ -1.09
SMAD1-202ENST00000394092 ZNF384Q8TF68 577 aa8.24□□□□□ -1.09
SMAD1-202ENST00000394092 RPGRQ92834 1020 aaKnown RBP8.24□□□□□ -1.09
SMAD1-202ENST00000394092 GJD4Q96KN9 370 aaPredicted RBP8.24□□□□□ -1.09
SMAD1-202ENST00000394092 PYM1Q9BRP8 204 aaKnown RBP8.24□□□□□ -1.09
SMAD1-202ENST00000394092 PHF20Q9BVI0 1012 aa8.24□□□□□ -1.09
SMAD1-202ENST00000394092 OSBPL5Q9H0X9 879 aaPredicted RBP8.24□□□□□ -1.09
SMAD1-202ENST00000394092 ZNF287Q9HBT7 754 aa8.24□□□□□ -1.09
SMAD1-202ENST00000394092 TFCP2L1Q9NZI6 479 aa8.24□□□□□ -1.09
SMAD1-202ENST00000394092 FBXO2Q9UK22 296 aaPredicted RBP8.24□□□□□ -1.09
SMAD1-202ENST00000394092 KCNJ14Q9UNX9 436 aa8.24□□□□□ -1.09
SMAD1-202ENST00000394092 SRPRBQ9Y5M8 271 aaKnown RBP8.24□□□□□ -1.09
SMAD1-202ENST00000394092 MYH1P12882 1939 aa8.24□□□□□ -1.09
SMAD1-202ENST00000394092 MYH8P13535 1937 aa8.24□□□□□ -1.09
SMAD1-202ENST00000394092 DDX60LQ5H9U9 1706 aaKnown RBP8.24□□□□□ -1.09
SMAD1-202ENST00000394092 CNTNAP5Q8WYK1 1306 aa8.24□□□□□ -1.09
SMAD1-202ENST00000394092 IRS2Q9Y4H2 1338 aa8.24□□□□□ -1.09
SMAD1-202ENST00000394092 BIN1O00499 593 aa8.24□□□□□ -1.09
SMAD1-202ENST00000394092 SMC2O95347 1197 aa8.24□□□□□ -1.09
SMAD1-202ENST00000394092 KLRK1P26718 216 aa8.24□□□□□ -1.09
SMAD1-202ENST00000394092 CALML3P27482 149 aa8.24□□□□□ -1.09
SMAD1-202ENST00000394092 TM4SF1P30408 202 aa8.24□□□□□ -1.09
SMAD1-202ENST00000394092 USP5P45974 858 aa8.24□□□□□ -1.09
SMAD1-202ENST00000394092 TRAPPC10P48553 1259 aa8.24□□□□□ -1.09
SMAD1-202ENST00000394092 GNAQP50148 359 aa8.24□□□□□ -1.09
SMAD1-202ENST00000394092 FAM177A1Q8N128 213 aaPredicted RBP8.24□□□□□ -1.09
SMAD1-202ENST00000394092 CCDC82Q8N4S0 544 aa8.24□□□□□ -1.09
SMAD1-202ENST00000394092 ERCC4Q92889 916 aaPredicted RBP8.24□□□□□ -1.09
SMAD1-202ENST00000394092 FBXW7Q969H0 707 aa8.24□□□□□ -1.09
SMAD1-202ENST00000394092 FERMT2Q96AC1 680 aa8.24□□□□□ -1.09
SMAD1-202ENST00000394092 CLIC6Q96NY7 704 aa8.24□□□□□ -1.09
SMAD1-202ENST00000394092 BCL11BQ9C0K0 894 aaPredicted RBP8.24□□□□□ -1.09
SMAD1-202ENST00000394092 NRBP1Q9UHY1 535 aa8.24□□□□□ -1.09
SMAD1-202ENST00000394092 CYP2D7A0A087X1C5 515 aa8.23□□□□□ -1.09
SMAD1-202ENST00000394092 KIF2AO00139 706 aaPredicted RBP8.23□□□□□ -1.09
SMAD1-202ENST00000394092 PRDM1O75626 825 aa8.23□□□□□ -1.09
SMAD1-202ENST00000394092 PLCG2P16885 1265 aa8.23□□□□□ -1.09
SMAD1-202ENST00000394092 ATP2B4P23634 1241 aa8.23□□□□□ -1.09
SMAD1-202ENST00000394092 TOB1P50616 345 aaPredicted RBP8.23□□□□□ -1.09
SMAD1-202ENST00000394092 FUT2Q10981 343 aa8.23□□□□□ -1.09
SMAD1-202ENST00000394092 NR5A1Q13285 461 aa8.23□□□□□ -1.09
SMAD1-202ENST00000394092 PNOCQ13519 176 aa8.23□□□□□ -1.09
SMAD1-202ENST00000394092 HSP90AA2PQ14568 343 aaPredicted RBP8.23□□□□□ -1.09
SMAD1-202ENST00000394092 NFIXQ14938 502 aa8.23□□□□□ -1.09
SMAD1-202ENST00000394092 POSTNQ15063 836 aa8.23□□□□□ -1.09
SMAD1-202ENST00000394092 PKN1Q16512 942 aa8.23□□□□□ -1.09
SMAD1-202ENST00000394092 CT47A1Q5JQC4 288 aaPredicted RBP8.23□□□□□ -1.09
SMAD1-202ENST00000394092 FAM196AQ6ZSG2 479 aa8.23□□□□□ -1.09
SMAD1-202ENST00000394092 METTL16Q86W50 562 aaKnown RBP8.23□□□□□ -1.09
SMAD1-202ENST00000394092 DGKHQ86XP1 1220 aa8.23□□□□□ -1.09
SMAD1-202ENST00000394092 SLF2Q8IX21 1173 aa8.23□□□□□ -1.09
SMAD1-202ENST00000394092 C17orf53Q8N3J3 647 aaPredicted RBP8.23□□□□□ -1.09
SMAD1-202ENST00000394092 CERKQ8TCT0 537 aa8.23□□□□□ -1.09
SMAD1-202ENST00000394092 CACTINQ8WUQ7 758 aaKnown RBP8.23□□□□□ -1.09
SMAD1-202ENST00000394092 SMARCE1Q969G3 411 aa8.23□□□□□ -1.09
SMAD1-202ENST00000394092 KAT14Q9H8E8 782 aa8.23□□□□□ -1.09
SMAD1-202ENST00000394092 CABP5Q9NP86 173 aa8.23□□□□□ -1.09
SMAD1-202ENST00000394092 MCM9Q9NXL9 1143 aa8.23□□□□□ -1.09
SMAD1-202ENST00000394092 VPS54Q9P1Q0 977 aa8.23□□□□□ -1.09
SMAD1-202ENST00000394092 UBE2Q2LH0YL09 131 aa8.22□□□□□ -1.09
SMAD1-202ENST00000394092 CCP110O43303 1012 aa8.22□□□□□ -1.09
SMAD1-202ENST00000394092 PLEKHA8P1O95397 391 aa8.22□□□□□ -1.09
SMAD1-202ENST00000394092 SCG2P13521 617 aa8.22□□□□□ -1.09
SMAD1-202ENST00000394092 SFPQP23246 707 aaKnown RBP eCLIP8.22□□□□□ -1.09
SMAD1-202ENST00000394092 KCNJ6P48051 423 aa8.22□□□□□ -1.09
SMAD1-202ENST00000394092 PPP4CP60510 307 aa8.22□□□□□ -1.09
SMAD1-202ENST00000394092 LRMPQ12912 555 aa8.22□□□□□ -1.09
SMAD1-202ENST00000394092 TPD52L1Q16890 204 aaPredicted RBP8.22□□□□□ -1.09
SMAD1-202ENST00000394092 CCDC144BQ3MJ40 725 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms