RNA–Protein interactions for RNA: ENST00000393943.9

GABRA1-202, Transcript of gamma-aminobutyric acid type A receptor alpha1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABRA1, Length 4,686 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA1-202ENST00000393943 BCCIPQ9P287 314 aaKnown RBP eCLIP9.63□□□□□ -0.87
GABRA1-202ENST00000393943 FAM184BQ9ULE4 1060 aa9.63□□□□□ -0.87
GABRA1-202ENST00000393943 SRPRBQ9Y5M8 271 aaKnown RBP9.63□□□□□ -0.87
GABRA1-202ENST00000393943 PARP3Q9Y6F1 533 aa9.63□□□□□ -0.87
GABRA1-202ENST00000393943 FMNL1O95466 1100 aaPredicted RBP9.63□□□□□ -0.87
GABRA1-202ENST00000393943 COPB1P53618 953 aaKnown RBP9.63□□□□□ -0.87
GABRA1-202ENST00000393943 GLE1Q53GS7 698 aaKnown RBP9.63□□□□□ -0.87
GABRA1-202ENST00000393943 TRMT44Q8IYL2 757 aaKnown RBP9.63□□□□□ -0.87
GABRA1-202ENST00000393943 KLHDC4Q8TBB5 520 aa9.63□□□□□ -0.87
GABRA1-202ENST00000393943 IFT74Q96LB3 600 aa9.63□□□□□ -0.87
GABRA1-202ENST00000393943 NOC4LQ9BVI4 516 aaKnown RBP9.63□□□□□ -0.87
GABRA1-202ENST00000393943 KAT14Q9H8E8 782 aa9.63□□□□□ -0.87
GABRA1-202ENST00000393943 SAMD15Q9P1V8 674 aa9.63□□□□□ -0.87
GABRA1-202ENST00000393943 MAP3K15Q6ZN16 1313 aa9.63□□□□□ -0.87
GABRA1-202ENST00000393943 FGAP02671 866 aa9.63□□□□□ -0.87
GABRA1-202ENST00000393943 ATP1A3P13637 1013 aa9.63□□□□□ -0.87
GABRA1-202ENST00000393943 LIFRP42702 1097 aa9.63□□□□□ -0.87
GABRA1-202ENST00000393943 NT5C2P49902 561 aa9.63□□□□□ -0.87
GABRA1-202ENST00000393943 ASIC1P78348 528 aa9.63□□□□□ -0.87
GABRA1-202ENST00000393943 HOOK3Q86VS8 718 aa9.63□□□□□ -0.87
GABRA1-202ENST00000393943 PROSER2Q86WR7 435 aaPredicted RBP9.63□□□□□ -0.87
GABRA1-202ENST00000393943 CUEDC2Q9H467 287 aa9.63□□□□□ -0.87
GABRA1-202ENST00000393943 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.63□□□□□ -0.87
GABRA1-202ENST00000393943 TLR7Q9NYK1 1049 aaKnown RBP9.63□□□□□ -0.87
GABRA1-202ENST00000393943 RWDD2AQ9UIY3 292 aa9.63□□□□□ -0.87
GABRA1-202ENST00000393943 CASP14P31944 242 aa9.62□□□□□ -0.87
GABRA1-202ENST00000393943 PLA2G4AP47712 749 aa9.62□□□□□ -0.87
GABRA1-202ENST00000393943 EXOSC10Q01780 885 aaKnown RBP9.62□□□□□ -0.87
GABRA1-202ENST00000393943 NBPF6Q5VWK0 638 aa9.62□□□□□ -0.87
GABRA1-202ENST00000393943 TOM1L2Q6ZVM7 507 aa9.62□□□□□ -0.87
GABRA1-202ENST00000393943 NBPF4Q96M43 638 aa9.62□□□□□ -0.87
GABRA1-202ENST00000393943 SEC62Q99442 399 aaKnown RBP9.62□□□□□ -0.87
GABRA1-202ENST00000393943 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP9.62□□□□□ -0.87
GABRA1-202ENST00000393943 FTOQ9C0B1 505 aaKnown RBP eCLIP9.62□□□□□ -0.87
GABRA1-202ENST00000393943 TMOD3Q9NYL9 352 aa9.62□□□□□ -0.87
GABRA1-202ENST00000393943 TRMT112Q9UI30 125 aaKnown RBP9.62□□□□□ -0.87
GABRA1-202ENST00000393943 SPATA31D1Q6ZQQ2 1576 aa9.62□□□□□ -0.87
GABRA1-202ENST00000393943 VWA3AA6NCI4 1184 aa9.62□□□□□ -0.87
GABRA1-202ENST00000393943 TULP1O00294 542 aaPredicted RBP9.62□□□□□ -0.87
GABRA1-202ENST00000393943 KIF1CO43896 1103 aaKnown RBP9.62□□□□□ -0.87
GABRA1-202ENST00000393943 GCP02774 474 aa9.62□□□□□ -0.87
GABRA1-202ENST00000393943 IFNAR1P17181 557 aa9.62□□□□□ -0.87
GABRA1-202ENST00000393943 RBL2Q08999 1139 aa9.62□□□□□ -0.87
GABRA1-202ENST00000393943 AKNAD1Q5T1N1 836 aa9.62□□□□□ -0.87
GABRA1-202ENST00000393943 APOA5Q6Q788 366 aa9.62□□□□□ -0.87
GABRA1-202ENST00000393943 CSGALNACT2Q8N6G5 542 aa9.62□□□□□ -0.87
GABRA1-202ENST00000393943 EDC3Q96F86 508 aaKnown RBP9.62□□□□□ -0.87
GABRA1-202ENST00000393943 PLVAPQ9BX97 442 aa9.62□□□□□ -0.87
GABRA1-202ENST00000393943 TMX4Q9H1E5 349 aaPredicted RBP9.62□□□□□ -0.87
GABRA1-202ENST00000393943 PLCB1Q9NQ66 1216 aa9.62□□□□□ -0.87
GABRA1-202ENST00000393943 TAB2Q9NYJ8 693 aa9.62□□□□□ -0.87
GABRA1-202ENST00000393943 ITIH6Q6UXX5 1313 aa9.62□□□□□ -0.87
GABRA1-202ENST00000393943 TAX1BP1Q86VP1 789 aa9.62□□□□□ -0.87
GABRA1-202ENST00000393943 CRNKL1Q9BZJ0 848 aaKnown RBP9.62□□□□□ -0.87
GABRA1-202ENST00000393943 ADGRG1Q9Y653 693 aa9.62□□□□□ -0.87
GABRA1-202ENST00000393943 CAPN7Q9Y6W3 813 aa9.62□□□□□ -0.87
GABRA1-202ENST00000393943 TECPR2O15040 1411 aa9.62□□□□□ -0.87
GABRA1-202ENST00000393943 MACROD2A1Z1Q3 448 aa9.62□□□□□ -0.87
GABRA1-202ENST00000393943 CEP57Q86XR8 500 aa9.62□□□□□ -0.87
GABRA1-202ENST00000393943 CDC5LQ99459 802 aaKnown RBP9.62□□□□□ -0.87
GABRA1-202ENST00000393943 RNF26Q9BY78 433 aaPredicted RBP9.62□□□□□ -0.87
GABRA1-202ENST00000393943 MMRN2Q9H8L6 949 aa9.62□□□□□ -0.87
GABRA1-202ENST00000393943 STRN4Q9NRL3 753 aa9.62□□□□□ -0.87
GABRA1-202ENST00000393943 AATFQ9NY61 560 aaKnown RBP eCLIP9.62□□□□□ -0.87
GABRA1-202ENST00000393943 PTPREP23469 700 aa9.61□□□□□ -0.87
GABRA1-202ENST00000393943 ATP5DP30049 168 aa9.61□□□□□ -0.87
GABRA1-202ENST00000393943 PTPN12Q05209 780 aaKnown RBP9.61□□□□□ -0.87
GABRA1-202ENST00000393943 SLC39A6Q13433 755 aa9.61□□□□□ -0.87
GABRA1-202ENST00000393943 NEDD9Q14511 834 aa9.61□□□□□ -0.87
GABRA1-202ENST00000393943 SLC9C1Q4G0N8 1177 aa9.61□□□□□ -0.87
GABRA1-202ENST00000393943 CEP85LQ5SZL2 805 aa9.61□□□□□ -0.87
GABRA1-202ENST00000393943 NFATC2IPQ8NCF5 419 aa9.61□□□□□ -0.87
GABRA1-202ENST00000393943 IFIH1Q9BYX4 1025 aaKnown RBP9.61□□□□□ -0.87
GABRA1-202ENST00000393943 ABCF2Q9UG63 623 aa9.61□□□□□ -0.87
GABRA1-202ENST00000393943 UTYO14607 1347 aa9.61□□□□□ -0.87
GABRA1-202ENST00000393943 KIAA0753Q2KHM9 967 aa9.61□□□□□ -0.87
GABRA1-202ENST00000393943 PHKBQ93100 1093 aa9.61□□□□□ -0.87
GABRA1-202ENST00000393943 PLCD4Q9BRC7 762 aa9.61□□□□□ -0.87
GABRA1-202ENST00000393943 CLSTN1O94985 981 aa9.61□□□□□ -0.87
GABRA1-202ENST00000393943 MMP1P03956 469 aa9.61□□□□□ -0.87
GABRA1-202ENST00000393943 LONP1P36776 959 aaKnown RBP9.61□□□□□ -0.87
GABRA1-202ENST00000393943 CETN2P41208 172 aa9.61□□□□□ -0.87
GABRA1-202ENST00000393943 MAGEA1P43355 309 aa9.61□□□□□ -0.87
GABRA1-202ENST00000393943 NOP2P46087 812 aaKnown RBP9.61□□□□□ -0.87
GABRA1-202ENST00000393943 CCT5P48643 541 aa9.61□□□□□ -0.87
GABRA1-202ENST00000393943 ZC3H6P61129 1189 aaKnown RBP9.61□□□□□ -0.87
GABRA1-202ENST00000393943 P3H4Q92791 437 aa9.61□□□□□ -0.87
GABRA1-202ENST00000393943 NCAPGQ9BPX3 1015 aa9.61□□□□□ -0.87
GABRA1-202ENST00000393943 ROBO2Q9HCK4 1378 aa9.61□□□□□ -0.87
GABRA1-202ENST00000393943 TBC1D8O95759 1140 aa9.61□□□□□ -0.87
GABRA1-202ENST00000393943 ENOX2Q16206 610 aaKnown RBP9.61□□□□□ -0.87
GABRA1-202ENST00000393943 SPTY2D1Q68D10 685 aaPredicted RBP9.61□□□□□ -0.87
GABRA1-202ENST00000393943 KRT28Q7Z3Y7 464 aa9.61□□□□□ -0.87
GABRA1-202ENST00000393943 SPAG5Q96R06 1193 aa9.61□□□□□ -0.87
GABRA1-202ENST00000393943 NAP1L4Q99733 375 aaKnown RBP9.61□□□□□ -0.87
GABRA1-202ENST00000393943 MTRF1LQ9UGC7 380 aaKnown RBP9.61□□□□□ -0.87
GABRA1-202ENST00000393943 ZNF652Q9Y2D9 606 aa9.61□□□□□ -0.87
GABRA1-202ENST00000393943 SH2B2O14492 632 aaPredicted RBP9.6□□□□□ -0.87
GABRA1-202ENST00000393943 NDUFA10O95299 355 aa9.6□□□□□ -0.87
GABRA1-202ENST00000393943 GNA11P29992 359 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms