RNA–Protein interactions for RNA: ENST00000393585.6

CASP3-202, Transcript of caspase 3, humanhuman

TSL 1 (best) BASIC

Gene CASP3, Length 2,624 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP3-202ENST00000393585 TMTC3Q6ZXV5 915 aa12.68□□□□□ -0.38
CASP3-202ENST00000393585 FMR1NBQ8N0W7 255 aaPredicted RBP12.68□□□□□ -0.38
CASP3-202ENST00000393585 SRBD1Q8N5C6 995 aaKnown RBP12.68□□□□□ -0.38
CASP3-202ENST00000393585 CTCFLQ8NI51 663 aaPredicted RBP12.68□□□□□ -0.38
CASP3-202ENST00000393585 MAP3K14Q99558 947 aa12.68□□□□□ -0.38
CASP3-202ENST00000393585 RBM28Q9NW13 759 aaKnown RBP12.68□□□□□ -0.38
CASP3-202ENST00000393585 MTMR7Q9Y216 660 aa12.68□□□□□ -0.38
CASP3-202ENST00000393585 GAKO14976 1311 aa12.68□□□□□ -0.38
CASP3-202ENST00000393585 TSPY3P0CV98 308 aa12.68□□□□□ -0.38
CASP3-202ENST00000393585 TSPY8P0CW00 308 aa12.68□□□□□ -0.38
CASP3-202ENST00000393585 PTPAQ15257 358 aa12.68□□□□□ -0.38
CASP3-202ENST00000393585 LUZP1Q86V48 1076 aa12.68□□□□□ -0.38
CASP3-202ENST00000393585 CNTNAP5Q8WYK1 1306 aa12.68□□□□□ -0.38
CASP3-202ENST00000393585 G3V3G9 751 aa12.67□□□□□ -0.38
CASP3-202ENST00000393585 PRPF3O43395 683 aaKnown RBP12.67□□□□□ -0.38
CASP3-202ENST00000393585 CHRNA5P30532 468 aa12.67□□□□□ -0.38
CASP3-202ENST00000393585 TOB1P50616 345 aaPredicted RBP12.67□□□□□ -0.38
CASP3-202ENST00000393585 SLC15A2Q16348 729 aa12.67□□□□□ -0.38
CASP3-202ENST00000393585 DCAF8Q5TAQ9 597 aa12.67□□□□□ -0.38
CASP3-202ENST00000393585 SLF2Q8IX21 1173 aa12.67□□□□□ -0.38
CASP3-202ENST00000393585 ZNF444Q8N0Y2 327 aaPredicted RBP12.67□□□□□ -0.38
CASP3-202ENST00000393585 FAM200AQ8TCP9 573 aa12.67□□□□□ -0.38
CASP3-202ENST00000393585 FAM163AQ96GL9 167 aaPredicted RBP12.67□□□□□ -0.38
CASP3-202ENST00000393585 TMX4Q9H1E5 349 aaPredicted RBP12.67□□□□□ -0.38
CASP3-202ENST00000393585 DNAJC25Q9H1X3 360 aa12.67□□□□□ -0.38
CASP3-202ENST00000393585 KAT14Q9H8E8 782 aa12.67□□□□□ -0.38
CASP3-202ENST00000393585 DBNDD1Q9H9R9 158 aa12.67□□□□□ -0.38
CASP3-202ENST00000393585 AP5Z1O43299 807 aa12.67□□□□□ -0.38
CASP3-202ENST00000393585 ATP2B1P20020 1258 aa12.67□□□□□ -0.38
CASP3-202ENST00000393585 RASA1P20936 1047 aa12.67□□□□□ -0.38
CASP3-202ENST00000393585 SCNN1DP51172 638 aa12.67□□□□□ -0.38
CASP3-202ENST00000393585 PICALMQ13492 652 aa12.67□□□□□ -0.38
CASP3-202ENST00000393585 PNMA1Q8ND90 353 aa12.67□□□□□ -0.38
CASP3-202ENST00000393585 CLIC6Q96NY7 704 aa12.67□□□□□ -0.38
CASP3-202ENST00000393585 KCNQ5Q9NR82 932 aa12.67□□□□□ -0.38
CASP3-202ENST00000393585 TTF2Q9UNY4 1162 aaKnown RBP12.67□□□□□ -0.38
CASP3-202ENST00000393585 FAM205CA6NFA0 338 aa12.66□□□□□ -0.38
CASP3-202ENST00000393585 VEGFAP15692 232 aaPredicted RBP12.66□□□□□ -0.38
CASP3-202ENST00000393585 PLCG2P16885 1265 aa12.66□□□□□ -0.38
CASP3-202ENST00000393585 CERS3Q8IU89 383 aa12.66□□□□□ -0.38
CASP3-202ENST00000393585 FOXP1Q9H334 677 aaPredicted RBP12.66□□□□□ -0.38
CASP3-202ENST00000393585 STX8Q9UNK0 236 aa12.66□□□□□ -0.38
CASP3-202ENST00000393585 H0YIN7 160 aa12.66□□□□□ -0.38
CASP3-202ENST00000393585 ADCY5O95622 1261 aa12.66□□□□□ -0.38
CASP3-202ENST00000393585 PFKFB1P16118 471 aa12.66□□□□□ -0.38
CASP3-202ENST00000393585 CDK8P49336 464 aa12.66□□□□□ -0.38
CASP3-202ENST00000393585 CAMKK2Q96RR4 588 aa12.66□□□□□ -0.38
CASP3-202ENST00000393585 SDF4Q9BRK5 362 aa12.66□□□□□ -0.38
CASP3-202ENST00000393585 PDGFDQ9GZP0 370 aaPredicted RBP12.66□□□□□ -0.38
CASP3-202ENST00000393585 CBX8Q9HC52 389 aa12.66□□□□□ -0.38
CASP3-202ENST00000393585 MYH1P12882 1939 aa12.66□□□□□ -0.38
CASP3-202ENST00000393585 DGKHQ86XP1 1220 aa12.65□□□□□ -0.38
CASP3-202ENST00000393585 STAG2Q8N3U4 1231 aa12.65□□□□□ -0.38
CASP3-202ENST00000393585 CABP5Q9NP86 173 aa12.65□□□□□ -0.38
CASP3-202ENST00000393585 DDX60LQ5H9U9 1706 aaKnown RBP12.65□□□□□ -0.38
CASP3-202ENST00000393585 ADAMTSL1Q8N6G6 1762 aa12.65□□□□□ -0.38
CASP3-202ENST00000393585 SNED1Q8TER0 1413 aa12.65□□□□□ -0.38
CASP3-202ENST00000393585 SLX4Q8IY92 1834 aa12.65□□□□□ -0.38
CASP3-202ENST00000393585 CTAGE5O15320 804 aa12.65□□□□□ -0.38
CASP3-202ENST00000393585 PPP6R2O75170 966 aa12.65□□□□□ -0.38
CASP3-202ENST00000393585 XBP1P17861 261 aa12.65□□□□□ -0.38
CASP3-202ENST00000393585 CMA1P23946 247 aa12.65□□□□□ -0.38
CASP3-202ENST00000393585 EARS2Q5JPH6 523 aaKnown RBP12.65□□□□□ -0.38
CASP3-202ENST00000393585 SHC4Q6S5L8 630 aa12.65□□□□□ -0.38
CASP3-202ENST00000393585 C16orf86Q6ZW13 317 aa12.65□□□□□ -0.38
CASP3-202ENST00000393585 RASGRP2Q7LDG7 609 aa12.65□□□□□ -0.38
CASP3-202ENST00000393585 EYA3Q99504 573 aa12.65□□□□□ -0.38
CASP3-202ENST00000393585 PHF20Q9BVI0 1012 aa12.65□□□□□ -0.38
CASP3-202ENST00000393585 PCDHB6Q9Y5E3 794 aa12.65□□□□□ -0.38
CASP3-202ENST00000393585 ZNF202O95125 648 aa12.64□□□□□ -0.39
CASP3-202ENST00000393585 ZNF165P49910 485 aa12.64□□□□□ -0.39
CASP3-202ENST00000393585 SPECC1Q5M775 1068 aa12.64□□□□□ -0.39
CASP3-202ENST00000393585 C11orf57Q6ZUT1 292 aaPredicted RBP12.64□□□□□ -0.39
CASP3-202ENST00000393585 JMYQ8N9B5 988 aa12.64□□□□□ -0.39
CASP3-202ENST00000393585 DDX4Q9NQI0 724 aaKnown RBP12.64□□□□□ -0.39
CASP3-202ENST00000393585 NOM1Q5C9Z4 860 aaKnown RBP12.64□□□□□ -0.39
CASP3-202ENST00000393585 RILPL1Q5EBL4 403 aa12.64□□□□□ -0.39
CASP3-202ENST00000393585 TMEM47Q9BQJ4 181 aa12.64□□□□□ -0.39
CASP3-202ENST00000393585 STK32BQ9NY57 414 aa12.64□□□□□ -0.39
CASP3-202ENST00000393585 RGPD3A6NKT7 1758 aaPredicted RBP12.64□□□□□ -0.39
CASP3-202ENST00000393585 RGPD4Q7Z3J3 1758 aa12.64□□□□□ -0.39
CASP3-202ENST00000393585 PTMAP06454 111 aaKnown RBP12.63□□□□□ -0.39
CASP3-202ENST00000393585 KIF5BP33176 963 aa12.63□□□□□ -0.39
CASP3-202ENST00000393585 KRT2P35908 639 aa12.63□□□□□ -0.39
CASP3-202ENST00000393585 GRIN1Q05586 938 aa12.63□□□□□ -0.39
CASP3-202ENST00000393585 SCG2P13521 617 aa12.63□□□□□ -0.39
CASP3-202ENST00000393585 NPY5RQ15761 445 aa12.63□□□□□ -0.39
CASP3-202ENST00000393585 ZSCAN30Q86W11 494 aa12.63□□□□□ -0.39
CASP3-202ENST00000393585 ANKS1AQ92625 1134 aa12.63□□□□□ -0.39
CASP3-202ENST00000393585 ZNF287Q9HBT7 754 aa12.63□□□□□ -0.39
CASP3-202ENST00000393585 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.63□□□□□ -0.39
CASP3-202ENST00000393585 TCP11L1Q9NUJ3 509 aa12.63□□□□□ -0.39
CASP3-202ENST00000393585 SUGT1Q9Y2Z0 365 aa12.63□□□□□ -0.39
CASP3-202ENST00000393585 GOLGA8HP0CJ92 632 aa12.62□□□□□ -0.39
CASP3-202ENST00000393585 SYKP43405 635 aa12.62□□□□□ -0.39
CASP3-202ENST00000393585 C1QBPQ07021 282 aaKnown RBP12.62□□□□□ -0.39
CASP3-202ENST00000393585 STYK1Q6J9G0 422 aa12.62□□□□□ -0.39
CASP3-202ENST00000393585 KIAA0825Q8IV33 1275 aa12.62□□□□□ -0.39
CASP3-202ENST00000393585 USP40Q9NVE5 1235 aa12.62□□□□□ -0.39
CASP3-202ENST00000393585 MAD2L2Q9UI95 211 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms