RNA–Protein interactions for RNA: ENST00000393551.5

PDLIM7-205, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best) BASIC

Gene PDLIM7, Length 1,226 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-205ENST00000393551 TRIM32Q13049 653 aa22.09■■□□□ 1.13
PDLIM7-205ENST00000393551 GPRC5AQ8NFJ5 357 aa22.09■■□□□ 1.13
PDLIM7-205ENST00000393551 LRRCC1Q9C099 1032 aa22.09■■□□□ 1.13
PDLIM7-205ENST00000393551 HABP4Q5JVS0 413 aaKnown RBP22.08■■□□□ 1.13
PDLIM7-205ENST00000393551 GCC1Q96CN9 775 aa22.08■■□□□ 1.13
PDLIM7-205ENST00000393551 DEFB118Q96PH6 123 aa22.08■■□□□ 1.13
PDLIM7-205ENST00000393551 KIAA1683Q9H0B3 1180 aa22.08■■□□□ 1.13
PDLIM7-205ENST00000393551 PORCNQ9H237 461 aa22.08■■□□□ 1.13
PDLIM7-205ENST00000393551 H0YGN5 161 aa22.07■■□□□ 1.12
PDLIM7-205ENST00000393551 CNMDO75829 334 aa22.07■■□□□ 1.12
PDLIM7-205ENST00000393551 MBD4O95243 580 aa22.07■■□□□ 1.12
PDLIM7-205ENST00000393551 ERVK-9P63128 1117 aa22.07■■□□□ 1.12
PDLIM7-205ENST00000393551 ERVK-24P63145 666 aa22.07■■□□□ 1.12
PDLIM7-205ENST00000393551 SEPT2Q15019 361 aa22.07■■□□□ 1.12
PDLIM7-205ENST00000393551 SLC44A5Q8NCS7 719 aa22.07■■□□□ 1.12
PDLIM7-205ENST00000393551 MYH8P13535 1937 aa22.07■■□□□ 1.12
PDLIM7-205ENST00000393551 SZT2Q5T011 3432 aa22.06■■□□□ 1.12
PDLIM7-205ENST00000393551 A0A1W2PRG0 241 aa22.06■■□□□ 1.12
PDLIM7-205ENST00000393551 VCAM1P19320 739 aa22.06■■□□□ 1.12
PDLIM7-205ENST00000393551 CATSPERGQ6ZRH7 1159 aa22.06■■□□□ 1.12
PDLIM7-205ENST00000393551 TRIB2Q92519 343 aa22.06■■□□□ 1.12
PDLIM7-205ENST00000393551 DYNLL2Q96FJ2 89 aa22.06■■□□□ 1.12
PDLIM7-205ENST00000393551 FEZ1Q99689 392 aa22.06■■□□□ 1.12
PDLIM7-205ENST00000393551 PAGR1Q9BTK6 254 aa22.06■■□□□ 1.12
PDLIM7-205ENST00000393551 CRISPLD2Q9H0B8 497 aa22.06■■□□□ 1.12
PDLIM7-205ENST00000393551 TRIOBPQ9H2D6 2365 aa22.06■■□□□ 1.12
PDLIM7-205ENST00000393551 USP17L15C9J2P7 530 aa22.05■■□□□ 1.12
PDLIM7-205ENST00000393551 USP17L13C9JLJ4 530 aa22.05■■□□□ 1.12
PDLIM7-205ENST00000393551 USP17L11C9JVI0 530 aa22.05■■□□□ 1.12
PDLIM7-205ENST00000393551 USP17L18D6R9N7 530 aa22.05■■□□□ 1.12
PDLIM7-205ENST00000393551 USP17L22D6RA61 530 aa22.05■■□□□ 1.12
PDLIM7-205ENST00000393551 USP17L17D6RBQ6 530 aa22.05■■□□□ 1.12
PDLIM7-205ENST00000393551 USP17L19D6RCP7 530 aa22.05■■□□□ 1.12
PDLIM7-205ENST00000393551 USP17L20D6RJB6 530 aa22.05■■□□□ 1.12
PDLIM7-205ENST00000393551 HMGCRP04035 888 aa22.05■■□□□ 1.12
PDLIM7-205ENST00000393551 CYP2B6P20813 491 aa22.05■■□□□ 1.12
PDLIM7-205ENST00000393551 USP17L24Q0WX57 530 aa22.05■■□□□ 1.12
PDLIM7-205ENST00000393551 USP6NLQ92738 828 aa22.05■■□□□ 1.12
PDLIM7-205ENST00000393551 CABP5Q9NP86 173 aa22.05■■□□□ 1.12
PDLIM7-205ENST00000393551 RLFQ13129 1914 aa22.05■■□□□ 1.12
PDLIM7-205ENST00000393551 CYP2D7A0A087X1C5 515 aa22.04■■□□□ 1.12
PDLIM7-205ENST00000393551 FARP2O94887 1054 aaPredicted RBP22.04■■□□□ 1.12
PDLIM7-205ENST00000393551 USP14P54578 494 aa22.04■■□□□ 1.12
PDLIM7-205ENST00000393551 UBE3CQ15386 1083 aa22.04■■□□□ 1.12
PDLIM7-205ENST00000393551 XRN2Q9H0D6 950 aaKnown RBP eCLIP22.04■■□□□ 1.128e-9■■■■□ 19.6
PDLIM7-205ENST00000393551 DCTPP1Q9H773 170 aa22.04■■□□□ 1.12
PDLIM7-205ENST00000393551 COLQQ9Y215 455 aaPredicted RBP22.04■■□□□ 1.12
PDLIM7-205ENST00000393551 ALPK3Q96L96 1907 aa22.04■■□□□ 1.12
PDLIM7-205ENST00000393551 MAPK4P31152 587 aa22.03■■□□□ 1.12
PDLIM7-205ENST00000393551 KIAA1755Q5JYT7 1200 aa22.03■■□□□ 1.12
PDLIM7-205ENST00000393551 MORN1Q5T089 497 aa22.03■■□□□ 1.12
PDLIM7-205ENST00000393551 GPR142Q7Z601 462 aa22.03■■□□□ 1.12
PDLIM7-205ENST00000393551 SIAH1Q8IUQ4 282 aa22.03■■□□□ 1.12
PDLIM7-205ENST00000393551 DPF3Q92784 378 aa22.03■■□□□ 1.12
PDLIM7-205ENST00000393551 DDX24Q9GZR7 859 aaKnown RBP eCLIP22.03■■□□□ 1.124e-7■■■□□ 16
PDLIM7-205ENST00000393551 PUS7LQ9H0K6 701 aaKnown RBP22.03■■□□□ 1.12
PDLIM7-205ENST00000393551 ATP8A2Q9NTI2 1148 aa22.03■■□□□ 1.12
PDLIM7-205ENST00000393551 TFRCP02786 760 aaKnown RBP22.02■■□□□ 1.12
PDLIM7-205ENST00000393551 MAP3K21Q5TCX8 1036 aa22.02■■□□□ 1.12
PDLIM7-205ENST00000393551 C12orf60Q5U649 245 aa22.02■■□□□ 1.12
PDLIM7-205ENST00000393551 LBX2Q6XYB7 198 aa22.02■■□□□ 1.12
PDLIM7-205ENST00000393551 GTF3C2Q8WUA4 911 aaPredicted RBP22.02■■□□□ 1.12
PDLIM7-205ENST00000393551 NUDT12Q9BQG2 462 aa22.02■■□□□ 1.12
PDLIM7-205ENST00000393551 RPAP3Q9H6T3 665 aaPredicted RBP22.02■■□□□ 1.12
PDLIM7-205ENST00000393551 BTBD7Q9P203 1132 aa22.02■■□□□ 1.12
PDLIM7-205ENST00000393551 RABGAP1Q9Y3P9 1069 aa22.02■■□□□ 1.12
PDLIM7-205ENST00000393551 RPTORQ8N122 1335 aa22.02■■□□□ 1.12
PDLIM7-205ENST00000393551 MPHOSPH10O00566 681 aaKnown RBP22.01■■□□□ 1.11
PDLIM7-205ENST00000393551 XRCC5P13010 732 aaKnown RBP22.01■■□□□ 1.11
PDLIM7-205ENST00000393551 AKR1B1P15121 316 aa22.01■■□□□ 1.11
PDLIM7-205ENST00000393551 TSHZ3Q63HK5 1081 aa22.01■■□□□ 1.11
PDLIM7-205ENST00000393551 CLEC10AQ8IUN9 316 aa22.01■■□□□ 1.11
PDLIM7-205ENST00000393551 SOCS4Q8WXH5 440 aa22.01■■□□□ 1.11
PDLIM7-205ENST00000393551 ECHDC1Q9NTX5 307 aa22.01■■□□□ 1.11
PDLIM7-205ENST00000393551 SPDYE16A6NNV3 312 aaPredicted RBP22■■□□□ 1.11
PDLIM7-205ENST00000393551 USP17L12C9JPN9 530 aa22■■□□□ 1.11
PDLIM7-205ENST00000393551 USP17L21D6R901 530 aa22■■□□□ 1.11
PDLIM7-205ENST00000393551 MNX1P50219 401 aaPredicted RBP22■■□□□ 1.11
PDLIM7-205ENST00000393551 CCL14Q16627 93 aa22■■□□□ 1.11
PDLIM7-205ENST00000393551 PLEKHH3Q7Z736 793 aa22■■□□□ 1.11
PDLIM7-205ENST00000393551 DIS3LQ8TF46 1054 aaKnown RBP22■■□□□ 1.11
PDLIM7-205ENST00000393551 SWAP70Q9UH65 585 aa22■■□□□ 1.11
PDLIM7-205ENST00000393551 PCDHB15Q9Y5E8 787 aa22■■□□□ 1.11
PDLIM7-205ENST00000393551 DNAH12Q6ZR08 3092 aa22■■□□□ 1.11
PDLIM7-205ENST00000393551 TMEM179Q6ZVK1 233 aa21.99■■□□□ 1.11
PDLIM7-205ENST00000393551 PAWRQ96IZ0 340 aaKnown RBP21.99■■□□□ 1.11
PDLIM7-205ENST00000393551 HMX1Q9NP08 348 aaPredicted RBP21.99■■□□□ 1.11
PDLIM7-205ENST00000393551 SLC4A4Q9Y6R1 1079 aa21.99■■□□□ 1.11
PDLIM7-205ENST00000393551 LAMA3Q16787 3333 aa21.99■■□□□ 1.11
PDLIM7-205ENST00000393551 PARP14Q460N5 1801 aa21.99■■□□□ 1.11
PDLIM7-205ENST00000393551 A0A0G2JMZ2 1700 aa21.98■■□□□ 1.11
PDLIM7-205ENST00000393551 PRKAR2AP13861 404 aaKnown RBP21.98■■□□□ 1.11
PDLIM7-205ENST00000393551 CDK8P49336 464 aa21.98■■□□□ 1.11
PDLIM7-205ENST00000393551 CTR9Q6PD62 1173 aa21.98■■□□□ 1.11
PDLIM7-205ENST00000393551 HTATIP2Q9BUP3 242 aa21.98■■□□□ 1.11
PDLIM7-205ENST00000393551 CAPN2P17655 700 aa21.97■■□□□ 1.11
PDLIM7-205ENST00000393551 FXR1P51114 621 aaKnown RBP eCLIP21.97■■□□□ 1.11
PDLIM7-205ENST00000393551 CACNB2Q08289 660 aaPredicted RBP21.97■■□□□ 1.11
PDLIM7-205ENST00000393551 C16orf86Q6ZW13 317 aa21.97■■□□□ 1.11
PDLIM7-205ENST00000393551 STRBPQ96SI9 672 aaKnown RBP21.97■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms