RNA–Protein interactions for RNA: ENST00000393454.6

TDP1-203, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TDP1, Length 2,068 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-203ENST00000393454 PNMA1Q8ND90 353 aa10.03□□□□□ -0.8
TDP1-203ENST00000393454 IDI2Q9BXS1 227 aa10.03□□□□□ -0.8
TDP1-203ENST00000393454 DHX36Q9H2U1 1008 aaKnown RBP10.03□□□□□ -0.8
TDP1-203ENST00000393454 FAM198AQ9UFP1 575 aa10.03□□□□□ -0.8
TDP1-203ENST00000393454 SWAP70Q9UH65 585 aa10.03□□□□□ -0.8
TDP1-203ENST00000393454 STK36Q9NRP7 1315 aa10.03□□□□□ -0.8
TDP1-203ENST00000393454 UBE2Q2LH0YL09 131 aa10.03□□□□□ -0.8
TDP1-203ENST00000393454 MPHOSPH10O00566 681 aaKnown RBP10.03□□□□□ -0.8
TDP1-203ENST00000393454 PLEKHA8P1O95397 391 aa10.03□□□□□ -0.8
TDP1-203ENST00000393454 DEXIO95424 95 aa10.03□□□□□ -0.8
TDP1-203ENST00000393454 GABPAQ06546 454 aa10.03□□□□□ -0.8
TDP1-203ENST00000393454 TNIP1Q15025 636 aa10.03□□□□□ -0.8
TDP1-203ENST00000393454 KRT40Q6A162 431 aa10.03□□□□□ -0.8
TDP1-203ENST00000393454 NBPF11Q86T75 865 aa10.03□□□□□ -0.8
TDP1-203ENST00000393454 AGBL3Q8NEM8 1001 aa10.03□□□□□ -0.8
TDP1-203ENST00000393454 GPT2Q8TD30 523 aa10.03□□□□□ -0.8
TDP1-203ENST00000393454 ANKS1AQ92625 1134 aa10.03□□□□□ -0.8
TDP1-203ENST00000393454 GMLQ99445 158 aa10.03□□□□□ -0.8
TDP1-203ENST00000393454 MYH6P13533 1939 aa10.02□□□□□ -0.8
TDP1-203ENST00000393454 CLRN2A0PK11 232 aa10.02□□□□□ -0.81
TDP1-203ENST00000393454 DDTLA6NHG4 134 aaPredicted RBP10.02□□□□□ -0.81
TDP1-203ENST00000393454 SPDYE2BA6NHP3 402 aa10.02□□□□□ -0.81
TDP1-203ENST00000393454 TCP10L2B9ZVM9 353 aa10.02□□□□□ -0.81
TDP1-203ENST00000393454 MBD3O95983 291 aa10.02□□□□□ -0.81
TDP1-203ENST00000393454 SPDYE6P0CI01 402 aa10.02□□□□□ -0.81
TDP1-203ENST00000393454 AKR1B1P15121 316 aa10.02□□□□□ -0.81
TDP1-203ENST00000393454 KIF5BP33176 963 aa10.02□□□□□ -0.81
TDP1-203ENST00000393454 GUCY1A2P33402 732 aa10.02□□□□□ -0.81
TDP1-203ENST00000393454 CEBPZQ03701 1054 aaKnown RBP10.02□□□□□ -0.81
TDP1-203ENST00000393454 CAVIN1Q6NZI2 390 aaKnown RBP10.02□□□□□ -0.81
TDP1-203ENST00000393454 TMEM87AQ8NBN3 555 aa10.02□□□□□ -0.81
TDP1-203ENST00000393454 CEP95Q96GE4 821 aa10.02□□□□□ -0.81
TDP1-203ENST00000393454 SPATA32Q96LK8 384 aa10.02□□□□□ -0.81
TDP1-203ENST00000393454 ZNF396Q96N95 335 aaPredicted RBP10.02□□□□□ -0.81
TDP1-203ENST00000393454 TMEM47Q9BQJ4 181 aa10.02□□□□□ -0.81
TDP1-203ENST00000393454 SCAND2PQ9GZW5 306 aaPredicted RBP10.02□□□□□ -0.81
TDP1-203ENST00000393454 PI4KBQ9UBF8 816 aa10.02□□□□□ -0.81
TDP1-203ENST00000393454 V9GY48 417 aaPredicted RBP10.02□□□□□ -0.81
TDP1-203ENST00000393454 hCG_1642624A0A1W2PR95 340 aa10.02□□□□□ -0.81
TDP1-203ENST00000393454 NPM3O75607 178 aaKnown RBP10.02□□□□□ -0.81
TDP1-203ENST00000393454 TMTC3Q6ZXV5 915 aa10.02□□□□□ -0.81
TDP1-203ENST00000393454 PIBF1Q8WXW3 757 aa10.02□□□□□ -0.81
TDP1-203ENST00000393454 RNF26Q9BY78 433 aaPredicted RBP10.02□□□□□ -0.81
TDP1-203ENST00000393454 VEZTQ9HBM0 779 aa10.02□□□□□ -0.81
TDP1-203ENST00000393454 ZNF70Q9UC06 446 aaPredicted RBP10.02□□□□□ -0.81
TDP1-203ENST00000393454 CFAP45Q9UL16 551 aa10.02□□□□□ -0.81
TDP1-203ENST00000393454 FAM196BA6NMK8 535 aa10.01□□□□□ -0.81
TDP1-203ENST00000393454 PRPF3O43395 683 aaKnown RBP10.01□□□□□ -0.81
TDP1-203ENST00000393454 ENTPD3O75355 529 aa10.01□□□□□ -0.81
TDP1-203ENST00000393454 SLURP2P0DP57 97 aa10.01□□□□□ -0.81
TDP1-203ENST00000393454 TOP1P11387 765 aaKnown RBP10.01□□□□□ -0.81
TDP1-203ENST00000393454 SHMT1P34896 483 aa10.01□□□□□ -0.81
TDP1-203ENST00000393454 EIF6P56537 245 aaKnown RBP10.01□□□□□ -0.81
TDP1-203ENST00000393454 UBE2HP62256 183 aa10.01□□□□□ -0.81
TDP1-203ENST00000393454 SH3BP5LQ7L8J4 393 aa10.01□□□□□ -0.81
TDP1-203ENST00000393454 SRBD1Q8N5C6 995 aaKnown RBP10.01□□□□□ -0.81
TDP1-203ENST00000393454 EHD4Q9H223 541 aa10.01□□□□□ -0.81
TDP1-203ENST00000393454 RBM27Q9P2N5 1060 aaKnown RBP10.01□□□□□ -0.81
TDP1-203ENST00000393454 GJA3Q9Y6H8 435 aa10.01□□□□□ -0.81
TDP1-203ENST00000393454 MYH15Q9Y2K3 1946 aa10.01□□□□□ -0.81
TDP1-203ENST00000393454 GOLGA6L4A6NEF3 574 aa10□□□□□ -0.81
TDP1-203ENST00000393454 KIF28PB7ZC32 967 aa10□□□□□ -0.81
TDP1-203ENST00000393454 MYO1BO43795 1136 aa10□□□□□ -0.81
TDP1-203ENST00000393454 XBP1P17861 261 aa10□□□□□ -0.81
TDP1-203ENST00000393454 ATP2B2Q01814 1243 aa10□□□□□ -0.81
TDP1-203ENST00000393454 KIF23Q02241 960 aaPredicted RBP10□□□□□ -0.81
TDP1-203ENST00000393454 GRM4Q14833 912 aa10□□□□□ -0.81
TDP1-203ENST00000393454 SAFBQ15424 915 aaKnown RBP eCLIP10□□□□□ -0.81
TDP1-203ENST00000393454 RBM26Q5T8P6 1007 aaKnown RBP10□□□□□ -0.81
TDP1-203ENST00000393454 ARHGAP27Q6ZUM4 889 aa10□□□□□ -0.81
TDP1-203ENST00000393454 BRAPQ7Z569 592 aa10□□□□□ -0.81
TDP1-203ENST00000393454 FOXP4Q8IVH2 680 aaPredicted RBP10□□□□□ -0.81
TDP1-203ENST00000393454 LEO1Q8WVC0 666 aaPredicted RBP10□□□□□ -0.81
TDP1-203ENST00000393454 KCNJ14Q9UNX9 436 aa10□□□□□ -0.81
TDP1-203ENST00000393454 BAZ2BQ9UIF8 2168 aaKnown RBP10□□□□□ -0.81
TDP1-203ENST00000393454 LTBP3Q9NS15 1303 aa10□□□□□ -0.81
TDP1-203ENST00000393454 GNAQP50148 359 aa10□□□□□ -0.81
TDP1-203ENST00000393454 FUT2Q10981 343 aa10□□□□□ -0.81
TDP1-203ENST00000393454 CERKLQ49MI3 558 aaPredicted RBP10□□□□□ -0.81
TDP1-203ENST00000393454 STAG2Q8N3U4 1231 aa10□□□□□ -0.81
TDP1-203ENST00000393454 RGS22Q8NE09 1264 aa10□□□□□ -0.81
TDP1-203ENST00000393454 CSRNP1Q96S65 589 aa10□□□□□ -0.81
TDP1-203ENST00000393454 MAP3K14Q99558 947 aa10□□□□□ -0.81
TDP1-203ENST00000393454 GNL3Q9BVP2 549 aaKnown RBP eCLIP10□□□□□ -0.81
TDP1-203ENST00000393454 FHDC1Q9C0D6 1143 aaPredicted RBP10□□□□□ -0.81
TDP1-203ENST00000393454 MTMR4Q9NYA4 1195 aa10□□□□□ -0.81
TDP1-203ENST00000393454 CLIP2Q9UDT6 1046 aa10□□□□□ -0.81
TDP1-203ENST00000393454 ARFGEF1Q9Y6D6 1849 aa9.99□□□□□ -0.81
TDP1-203ENST00000393454 CNTNAP5Q8WYK1 1306 aa9.99□□□□□ -0.81
TDP1-203ENST00000393454 SHTN1A0MZ66 631 aa9.99□□□□□ -0.81
TDP1-203ENST00000393454 PARP1P09874 1014 aaKnown RBP9.99□□□□□ -0.81
TDP1-203ENST00000393454 GOLGA8HP0CJ92 632 aa9.99□□□□□ -0.81
TDP1-203ENST00000393454 DEKP35659 375 aaKnown RBP9.99□□□□□ -0.81
TDP1-203ENST00000393454 SPDYE2Q495Y8 402 aa9.99□□□□□ -0.81
TDP1-203ENST00000393454 ATL3Q6DD88 541 aa9.99□□□□□ -0.81
TDP1-203ENST00000393454 CLEC10AQ8IUN9 316 aa9.99□□□□□ -0.81
TDP1-203ENST00000393454 LRRC47Q8N1G4 583 aaKnown RBP9.99□□□□□ -0.81
TDP1-203ENST00000393454 CCDC17Q96LX7 622 aa9.99□□□□□ -0.81
TDP1-203ENST00000393454 USP28Q96RU2 1077 aa9.99□□□□□ -0.81
TDP1-203ENST00000393454 FTOQ9C0B1 505 aaKnown RBP eCLIP9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms