RNA–Protein interactions for RNA: ENST00000393287.9

ATXN3-203, Transcript of ataxin 3, humanhuman

TSL 1 (best) BASIC

Gene ATXN3, Length 6,770 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-203ENST00000393287 TNNT3P45378 269 aaPredicted RBP9.16□□□□□ -0.94
ATXN3-203ENST00000393287 SNX16P57768 344 aa9.16□□□□□ -0.94
ATXN3-203ENST00000393287 TCP10Q12799 353 aa9.16□□□□□ -0.94
ATXN3-203ENST00000393287 GADL1Q6ZQY3 521 aa9.16□□□□□ -0.94
ATXN3-203ENST00000393287 MYCNP04198 464 aaPredicted RBP9.15□□□□□ -0.94
ATXN3-203ENST00000393287 CHMP4BP1P59074 171 aa9.15□□□□□ -0.94
ATXN3-203ENST00000393287 GPSM2P81274 684 aa9.15□□□□□ -0.94
ATXN3-203ENST00000393287 FAM160B1Q5W0V3 765 aa9.15□□□□□ -0.94
ATXN3-203ENST00000393287 TTC14Q96N46 770 aa9.15□□□□□ -0.94
ATXN3-203ENST00000393287 CNNM4Q6P4Q7 775 aa9.15□□□□□ -0.94
ATXN3-203ENST00000393287 ZNF526Q8TF50 670 aaPredicted RBP9.15□□□□□ -0.94
ATXN3-203ENST00000393287 CSRNP1Q96S65 589 aa9.15□□□□□ -0.94
ATXN3-203ENST00000393287 USP17L12C9JPN9 530 aa9.15□□□□□ -0.94
ATXN3-203ENST00000393287 USP17L21D6R901 530 aa9.15□□□□□ -0.94
ATXN3-203ENST00000393287 PRPHP41219 470 aa9.15□□□□□ -0.94
ATXN3-203ENST00000393287 RCSD1Q6JBY9 416 aa9.15□□□□□ -0.94
ATXN3-203ENST00000393287 CCDC129Q6ZRS4 1044 aa9.15□□□□□ -0.94
ATXN3-203ENST00000393287 PAF1Q8N7H5 531 aa9.15□□□□□ -0.94
ATXN3-203ENST00000393287 CDHR1Q96JP9 859 aa9.15□□□□□ -0.94
ATXN3-203ENST00000393287 FAM227BQ96M60 508 aa9.15□□□□□ -0.94
ATXN3-203ENST00000393287 SLC4A9Q96Q91 983 aa9.15□□□□□ -0.94
ATXN3-203ENST00000393287 JPH2Q9BR39 696 aaPredicted RBP9.15□□□□□ -0.94
ATXN3-203ENST00000393287 MAGEF1Q9HAY2 307 aa9.15□□□□□ -0.94
ATXN3-203ENST00000393287 PODXL2Q9NZ53 605 aa9.15□□□□□ -0.94
ATXN3-203ENST00000393287 PHLPP2Q6ZVD8 1323 aa9.15□□□□□ -0.94
ATXN3-203ENST00000393287 HSPD1P10809 573 aaKnown RBP9.15□□□□□ -0.94
ATXN3-203ENST00000393287 ASIC1P78348 528 aa9.15□□□□□ -0.94
ATXN3-203ENST00000393287 FBXO11Q86XK2 927 aa9.15□□□□□ -0.94
ATXN3-203ENST00000393287 IQCDQ96DY2 449 aa9.15□□□□□ -0.94
ATXN3-203ENST00000393287 RNF216Q9NWF9 866 aaPredicted RBP9.15□□□□□ -0.94
ATXN3-203ENST00000393287 STRN3Q13033 797 aa9.15□□□□□ -0.95
ATXN3-203ENST00000393287 PRKG1Q13976 671 aa9.15□□□□□ -0.95
ATXN3-203ENST00000393287 PTF1AQ7RTS3 328 aa9.15□□□□□ -0.95
ATXN3-203ENST00000393287 NECAB1Q8N987 351 aa9.15□□□□□ -0.95
ATXN3-203ENST00000393287 TRIM47Q96LD4 638 aa9.15□□□□□ -0.95
ATXN3-203ENST00000393287 NOD1Q9Y239 953 aa9.15□□□□□ -0.95
ATXN3-203ENST00000393287 MCM3P25205 808 aa9.14□□□□□ -0.95
ATXN3-203ENST00000393287 HOXA10P31260 410 aaPredicted RBP9.14□□□□□ -0.95
ATXN3-203ENST00000393287 SLFN13Q68D06 897 aa9.14□□□□□ -0.95
ATXN3-203ENST00000393287 ZNF654Q8IZM8 581 aa9.14□□□□□ -0.95
ATXN3-203ENST00000393287 FAM177A1Q8N128 213 aaPredicted RBP9.14□□□□□ -0.95
ATXN3-203ENST00000393287 PDE4CQ08493 712 aa9.14□□□□□ -0.95
ATXN3-203ENST00000393287 AOC3Q16853 763 aa9.14□□□□□ -0.95
ATXN3-203ENST00000393287 KLHL40Q2TBA0 621 aa9.14□□□□□ -0.95
ATXN3-203ENST00000393287 ARHGEF16Q5VV41 709 aa9.14□□□□□ -0.95
ATXN3-203ENST00000393287 GPBP1L1Q9HC44 474 aaPredicted RBP9.14□□□□□ -0.95
ATXN3-203ENST00000393287 KCTD2Q14681 263 aa9.14□□□□□ -0.95
ATXN3-203ENST00000393287 TMEM179Q6ZVK1 233 aa9.14□□□□□ -0.95
ATXN3-203ENST00000393287 REXO1Q8N1G1 1221 aaKnown RBP9.14□□□□□ -0.95
ATXN3-203ENST00000393287 DDX12PQ92771 950 aa9.14□□□□□ -0.95
ATXN3-203ENST00000393287 LRRC2Q9BYS8 371 aa9.14□□□□□ -0.95
ATXN3-203ENST00000393287 COL14A1Q05707 1796 aaKnown RBP9.14□□□□□ -0.95
ATXN3-203ENST00000393287 PFKFB2O60825 505 aa9.14□□□□□ -0.95
ATXN3-203ENST00000393287 ADORA1P30542 326 aa9.14□□□□□ -0.95
ATXN3-203ENST00000393287 TTC38Q5R3I4 469 aa9.14□□□□□ -0.95
ATXN3-203ENST00000393287 STRIP1Q5VSL9 837 aa9.14□□□□□ -0.95
ATXN3-203ENST00000393287 ALS2CR12Q96Q35 445 aa9.14□□□□□ -0.95
ATXN3-203ENST00000393287 FBXO40Q9UH90 709 aa9.14□□□□□ -0.95
ATXN3-203ENST00000393287 ARID4AP29374 1257 aaPredicted RBP9.14□□□□□ -0.95
ATXN3-203ENST00000393287 CCT6AP40227 531 aaKnown RBP9.14□□□□□ -0.95
ATXN3-203ENST00000393287 PNMA8AQ86V59 439 aaPredicted RBP9.14□□□□□ -0.95
ATXN3-203ENST00000393287 GRPEL1Q9HAV7 217 aa9.14□□□□□ -0.95
ATXN3-203ENST00000393287 PNPLA7Q6ZV29 1317 aa9.14□□□□□ -0.95
ATXN3-203ENST00000393287 MCM7P33993 719 aa9.13□□□□□ -0.95
ATXN3-203ENST00000393287 TRAPPC10P48553 1259 aa9.13□□□□□ -0.95
ATXN3-203ENST00000393287 FOXO4P98177 505 aa9.13□□□□□ -0.95
ATXN3-203ENST00000393287 RASGRF1Q13972 1273 aa9.13□□□□□ -0.95
ATXN3-203ENST00000393287 PPP1R18Q6NYC8 613 aa9.13□□□□□ -0.95
ATXN3-203ENST00000393287 RNF214Q8ND24 703 aa9.13□□□□□ -0.95
ATXN3-203ENST00000393287 OTUD7AQ8TE49 926 aaPredicted RBP9.13□□□□□ -0.95
ATXN3-203ENST00000393287 SFPQP23246 707 aaKnown RBP eCLIP9.13□□□□□ -0.95
ATXN3-203ENST00000393287 CRKP46108 304 aa9.13□□□□□ -0.95
ATXN3-203ENST00000393287 DDR1Q08345 913 aa9.13□□□□□ -0.95
ATXN3-203ENST00000393287 HACL1Q9UJ83 578 aa9.13□□□□□ -0.95
ATXN3-203ENST00000393287 TUBB4AP04350 444 aa9.13□□□□□ -0.95
ATXN3-203ENST00000393287 FHDC1Q9C0D6 1143 aaPredicted RBP9.13□□□□□ -0.95
ATXN3-203ENST00000393287 SERPINB13Q9UIV8 391 aa9.13□□□□□ -0.95
ATXN3-203ENST00000393287 V9GY48 417 aaPredicted RBP9.13□□□□□ -0.95
ATXN3-203ENST00000393287 CCNT1O60563 726 aaKnown RBP9.13□□□□□ -0.95
ATXN3-203ENST00000393287 PHACTR2O75167 634 aa9.13□□□□□ -0.95
ATXN3-203ENST00000393287 TEX35Q5T0J7 233 aa9.13□□□□□ -0.95
ATXN3-203ENST00000393287 SH3GLB2Q9NR46 395 aa9.13□□□□□ -0.95
ATXN3-203ENST00000393287 MROH7-TTC4A0A0A0MT08 1334 aa9.13□□□□□ -0.95
ATXN3-203ENST00000393287 UBN2Q6ZU65 1347 aa9.13□□□□□ -0.95
ATXN3-203ENST00000393287 DISP2A7MBM2 1401 aa9.13□□□□□ -0.95
ATXN3-203ENST00000393287 PDE4DQ08499 809 aa9.13□□□□□ -0.95
ATXN3-203ENST00000393287 AMNQ9BXJ7 453 aa9.13□□□□□ -0.95
ATXN3-203ENST00000393287 ZSWIM6Q9HCJ5 1215 aa9.13□□□□□ -0.95
ATXN3-203ENST00000393287 GCFC2P16383 781 aaKnown RBP9.13□□□□□ -0.95
ATXN3-203ENST00000393287 ODR4Q5SWX8 454 aa9.13□□□□□ -0.95
ATXN3-203ENST00000393287 USP17L2Q6R6M4 530 aa9.13□□□□□ -0.95
ATXN3-203ENST00000393287 PNMA1Q8ND90 353 aa9.13□□□□□ -0.95
ATXN3-203ENST00000393287 PLVAPQ9BX97 442 aa9.13□□□□□ -0.95
ATXN3-203ENST00000393287 CAMK4Q16566 473 aa9.12□□□□□ -0.95
ATXN3-203ENST00000393287 CALCRLQ16602 461 aa9.12□□□□□ -0.95
ATXN3-203ENST00000393287 RAB11FIP4Q86YS3 637 aa9.12□□□□□ -0.95
ATXN3-203ENST00000393287 KIFC2Q96AC6 838 aa9.12□□□□□ -0.95
ATXN3-203ENST00000393287 ZKSCAN3Q9BRR0 538 aa9.12□□□□□ -0.95
ATXN3-203ENST00000393287 ARHGEF35A5YM69 484 aa9.12□□□□□ -0.95
ATXN3-203ENST00000393287 ERLIN1O75477 346 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms