RNA–Protein interactions for RNA: ENST00000393119.6

MKS1-202, Transcript of Meckel syndrome, type 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MKS1, Length 2,397 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-202ENST00000393119 DACT1Q9NYF0 836 aa17.35■□□□□ 0.37
MKS1-202ENST00000393119 NID2Q14112 1375 aa17.34■□□□□ 0.37
MKS1-202ENST00000393119 SHTN1A0MZ66 631 aa17.34■□□□□ 0.37
MKS1-202ENST00000393119 DDX60LQ5H9U9 1706 aaKnown RBP17.34■□□□□ 0.37
MKS1-202ENST00000393119 EARS2Q5JPH6 523 aaKnown RBP17.34■□□□□ 0.37
MKS1-202ENST00000393119 HHIPL2Q6UWX4 724 aa17.34■□□□□ 0.37
MKS1-202ENST00000393119 SH3BP5LQ7L8J4 393 aa17.34■□□□□ 0.37
MKS1-202ENST00000393119 LARGE2Q8N3Y3 721 aa17.34■□□□□ 0.37
MKS1-202ENST00000393119 NAV1Q8NEY1 1877 aa17.34■□□□□ 0.37
MKS1-202ENST00000393119 BICD2Q8TD16 824 aa17.34■□□□□ 0.37
MKS1-202ENST00000393119 RCOR1Q9UKL0 485 aa17.34■□□□□ 0.37
MKS1-202ENST00000393119 PSMD14O00487 310 aa17.33■□□□□ 0.37
MKS1-202ENST00000393119 ATP2B1P20020 1258 aa17.33■□□□□ 0.37
MKS1-202ENST00000393119 MARCKSP29966 332 aaPredicted RBP17.33■□□□□ 0.37
MKS1-202ENST00000393119 CCDC93Q567U6 631 aa17.33■□□□□ 0.37
MKS1-202ENST00000393119 TMTC3Q6ZXV5 915 aa17.33■□□□□ 0.37
MKS1-202ENST00000393119 TRIM22Q8IYM9 498 aa17.33■□□□□ 0.37
MKS1-202ENST00000393119 SLC16A10Q8TF71 515 aa17.33■□□□□ 0.37
MKS1-202ENST00000393119 OSBPL5Q9H0X9 879 aaPredicted RBP17.33■□□□□ 0.37
MKS1-202ENST00000393119 FAM198AQ9UFP1 575 aa17.33■□□□□ 0.37
MKS1-202ENST00000393119 SUGT1Q9Y2Z0 365 aa17.33■□□□□ 0.37
MKS1-202ENST00000393119 ELP1O95163 1332 aa17.33■□□□□ 0.37
MKS1-202ENST00000393119 GOLGA6L4A6NEF3 574 aa17.33■□□□□ 0.36
MKS1-202ENST00000393119 LRSAM1Q6UWE0 723 aa17.33■□□□□ 0.36
MKS1-202ENST00000393119 CFAP45Q9UL16 551 aa17.33■□□□□ 0.36
MKS1-202ENST00000393119 PCDHA7Q9UN72 937 aa17.33■□□□□ 0.36
MKS1-202ENST00000393119 ME1P48163 572 aa17.32■□□□□ 0.36
MKS1-202ENST00000393119 GNL2Q13823 731 aaKnown RBP17.32■□□□□ 0.36
MKS1-202ENST00000393119 CKAP2LQ8IYA6 745 aa17.32■□□□□ 0.36
MKS1-202ENST00000393119 DIS3L2Q8IYB7 885 aaKnown RBP17.32■□□□□ 0.36
MKS1-202ENST00000393119 ERCC4Q92889 916 aaPredicted RBP17.32■□□□□ 0.36
MKS1-202ENST00000393119 ZDHHC15Q96MV8 337 aa17.32■□□□□ 0.36
MKS1-202ENST00000393119 DNAJC18Q9H819 358 aa17.32■□□□□ 0.36
MKS1-202ENST00000393119 CNTNAP5Q8WYK1 1306 aa17.32■□□□□ 0.36
MKS1-202ENST00000393119 ECM29Q5VYK3 1845 aa17.32■□□□□ 0.36
MKS1-202ENST00000393119 A0A087WWV3 80 aa17.32■□□□□ 0.36
MKS1-202ENST00000393119 CCDC196A0A1B0GTZ2 297 aa17.32■□□□□ 0.36
MKS1-202ENST00000393119 DEXIO95424 95 aa17.32■□□□□ 0.36
MKS1-202ENST00000393119 MMP1P03956 469 aa17.32■□□□□ 0.36
MKS1-202ENST00000393119 TPM2P07951 284 aa17.32■□□□□ 0.36
MKS1-202ENST00000393119 GABPAQ06546 454 aa17.32■□□□□ 0.36
MKS1-202ENST00000393119 CSPP1Q1MSJ5 1256 aa17.32■□□□□ 0.36
MKS1-202ENST00000393119 CCDC183Q5T5S1 534 aa17.32■□□□□ 0.36
MKS1-202ENST00000393119 LINC00301Q8NCQ3 95 aa17.32■□□□□ 0.36
MKS1-202ENST00000393119 MRVI1Q9Y6F6 885 aa17.32■□□□□ 0.36
MKS1-202ENST00000393119 STK36Q9NRP7 1315 aa17.32■□□□□ 0.36
MKS1-202ENST00000393119 CLRN2A0PK11 232 aa17.31■□□□□ 0.36
MKS1-202ENST00000393119 DDAH1O94760 285 aa17.31■□□□□ 0.36
MKS1-202ENST00000393119 TRIM29Q14134 588 aa17.31■□□□□ 0.36
MKS1-202ENST00000393119 SF3A1Q15459 793 aaKnown RBP17.31■□□□□ 0.36
MKS1-202ENST00000393119 CFAP100Q494V2 611 aa17.31■□□□□ 0.36
MKS1-202ENST00000393119 USP17L2Q6R6M4 530 aa17.31■□□□□ 0.36
MKS1-202ENST00000393119 CTCFLQ8NI51 663 aaPredicted RBP17.31■□□□□ 0.36
MKS1-202ENST00000393119 GPKOWQ92917 476 aaPredicted RBP eCLIP17.31■□□□□ 0.36
MKS1-202ENST00000393119 MAD2L2Q9UI95 211 aa17.31■□□□□ 0.36
MKS1-202ENST00000393119 QSER1Q2KHR3 1735 aa17.31■□□□□ 0.36
MKS1-202ENST00000393119 WNT7AO00755 349 aa17.31■□□□□ 0.36
MKS1-202ENST00000393119 CYTH3O43739 400 aa17.31■□□□□ 0.36
MKS1-202ENST00000393119 TOB1P50616 345 aaPredicted RBP17.31■□□□□ 0.36
MKS1-202ENST00000393119 DGKHQ86XP1 1220 aa17.31■□□□□ 0.36
MKS1-202ENST00000393119 CCAR1Q8IX12 1150 aaKnown RBP17.31■□□□□ 0.36
MKS1-202ENST00000393119 LRRC47Q8N1G4 583 aaKnown RBP17.31■□□□□ 0.36
MKS1-202ENST00000393119 ZNF396Q96N95 335 aaPredicted RBP17.31■□□□□ 0.36
MKS1-202ENST00000393119 SHMT1P34896 483 aa17.3■□□□□ 0.36
MKS1-202ENST00000393119 ZSCAN29Q8IWY8 852 aaPredicted RBP17.3■□□□□ 0.36
MKS1-202ENST00000393119 CDAN1Q8IWY9 1227 aa17.3■□□□□ 0.36
MKS1-202ENST00000393119 RTEL1Q9NZ71 1219 aa17.3■□□□□ 0.36
MKS1-202ENST00000393119 PIM2Q9P1W9 311 aa17.3■□□□□ 0.36
MKS1-202ENST00000393119 A0A1B0GVL5 298 aa17.3■□□□□ 0.36
MKS1-202ENST00000393119 U2AF2P26368 475 aaKnown RBP eCLIP17.3■□□□□ 0.36
MKS1-202ENST00000393119 STK38Q15208 465 aa17.3■□□□□ 0.36
MKS1-202ENST00000393119 NEDD1Q8NHV4 660 aa17.3■□□□□ 0.36
MKS1-202ENST00000393119 PPP1R9BQ96SB3 815 aa17.3■□□□□ 0.36
MKS1-202ENST00000393119 RNF26Q9BY78 433 aaPredicted RBP17.3■□□□□ 0.36
MKS1-202ENST00000393119 SERPINB13Q9UIV8 391 aa17.3■□□□□ 0.36
MKS1-202ENST00000393119 PRPF3O43395 683 aaKnown RBP17.29■□□□□ 0.36
MKS1-202ENST00000393119 IGSF3O75054 1194 aa17.29■□□□□ 0.36
MKS1-202ENST00000393119 AKAP17AQ02040 695 aaKnown RBP17.29■□□□□ 0.36
MKS1-202ENST00000393119 ANO1Q5XXA6 986 aa17.29■□□□□ 0.36
MKS1-202ENST00000393119 RTKN2Q8IZC4 609 aa17.29■□□□□ 0.36
MKS1-202ENST00000393119 CLIC6Q96NY7 704 aa17.29■□□□□ 0.36
MKS1-202ENST00000393119 MTFR1LQ9H019 292 aa17.29■□□□□ 0.36
MKS1-202ENST00000393119 MYH1P12882 1939 aa17.29■□□□□ 0.36
MKS1-202ENST00000393119 USP17L5A8MUK1 530 aa17.29■□□□□ 0.36
MKS1-202ENST00000393119 MPHOSPH10O00566 681 aaKnown RBP17.29■□□□□ 0.36
MKS1-202ENST00000393119 SPECC1Q5M775 1068 aa17.29■□□□□ 0.36
MKS1-202ENST00000393119 TYW1BQ6NUM6 668 aa17.29■□□□□ 0.36
MKS1-202ENST00000393119 NLGN2Q8NFZ4 835 aa17.29■□□□□ 0.36
MKS1-202ENST00000393119 UBA5Q9GZZ9 404 aa17.29■□□□□ 0.36
MKS1-202ENST00000393119 VAT1LQ9HCJ6 419 aa17.29■□□□□ 0.36
MKS1-202ENST00000393119 BCS1LQ9Y276 419 aa17.29■□□□□ 0.36
MKS1-202ENST00000393119 FRMPD2Q68DX3 1309 aaPredicted RBP17.28■□□□□ 0.36
MKS1-202ENST00000393119 TCP10L2B9ZVM9 353 aa17.28■□□□□ 0.36
MKS1-202ENST00000393119 RCAN1P53805 252 aa17.28■□□□□ 0.36
MKS1-202ENST00000393119 JAG1P78504 1218 aa17.28■□□□□ 0.36
MKS1-202ENST00000393119 ATP2B2Q01814 1243 aa17.28■□□□□ 0.36
MKS1-202ENST00000393119 GRIN1Q05586 938 aa17.28■□□□□ 0.36
MKS1-202ENST00000393119 NPY5RQ15761 445 aa17.28■□□□□ 0.36
MKS1-202ENST00000393119 CC2D2BQ6DHV5 1058 aa17.28■□□□□ 0.36
MKS1-202ENST00000393119 BRAPQ7Z569 592 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms