RNA–Protein interactions for RNA: ENST00000392901.10

SHTN1-203, Transcript of shootin 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SHTN1, Length 2,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHTN1-203ENST00000392901 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.43■□□□□ 0.86
SHTN1-203ENST00000392901 YDJCA8MPS7 323 aa20.42■□□□□ 0.86
SHTN1-203ENST00000392901 BTBD18B2RXH4 712 aa20.42■□□□□ 0.86
SHTN1-203ENST00000392901 PRPF3O43395 683 aaKnown RBP20.42■□□□□ 0.86
SHTN1-203ENST00000392901 U2AF2P26368 475 aaKnown RBP eCLIP20.42■□□□□ 0.862e-6■□□□□ 9.8
SHTN1-203ENST00000392901 NFIAQ12857 509 aa20.42■□□□□ 0.86
SHTN1-203ENST00000392901 STK38Q15208 465 aa20.42■□□□□ 0.86
SHTN1-203ENST00000392901 SAFBQ15424 915 aaKnown RBP eCLIP20.42■□□□□ 0.86
SHTN1-203ENST00000392901 PKN1Q16512 942 aa20.42■□□□□ 0.86
SHTN1-203ENST00000392901 RTKN2Q8IZC4 609 aa20.42■□□□□ 0.86
SHTN1-203ENST00000392901 LINC00301Q8NCQ3 95 aa20.42■□□□□ 0.86
SHTN1-203ENST00000392901 PPP1R9BQ96SB3 815 aa20.42■□□□□ 0.86
SHTN1-203ENST00000392901 DDX60LQ5H9U9 1706 aaKnown RBP20.42■□□□□ 0.86
SHTN1-203ENST00000392901 NR1I2O75469 434 aa20.42■□□□□ 0.86
SHTN1-203ENST00000392901 CACNB3P54284 484 aa20.42■□□□□ 0.86
SHTN1-203ENST00000392901 CCDC173Q0VFZ6 552 aa20.42■□□□□ 0.86
SHTN1-203ENST00000392901 SF3A1Q15459 793 aaKnown RBP20.42■□□□□ 0.86
SHTN1-203ENST00000392901 DIS3L2Q8IYB7 885 aaKnown RBP20.42■□□□□ 0.86
SHTN1-203ENST00000392901 ANKS1AQ92625 1134 aa20.42■□□□□ 0.86
SHTN1-203ENST00000392901 FUCA2Q9BTY2 467 aa20.42■□□□□ 0.86
SHTN1-203ENST00000392901 POLR3EQ9NVU0 708 aa20.42■□□□□ 0.86
SHTN1-203ENST00000392901 PIBF1Q8WXW3 757 aa20.41■□□□□ 0.86
SHTN1-203ENST00000392901 ANP32BQ92688 251 aaKnown RBP20.41■□□□□ 0.86
SHTN1-203ENST00000392901 TMEM47Q9BQJ4 181 aa20.41■□□□□ 0.86
SHTN1-203ENST00000392901 OSBPL5Q9H0X9 879 aaPredicted RBP20.41■□□□□ 0.86
SHTN1-203ENST00000392901 ZNF277Q9NRM2 450 aaPredicted RBP20.41■□□□□ 0.86
SHTN1-203ENST00000392901 VPS54Q9P1Q0 977 aa20.41■□□□□ 0.86
SHTN1-203ENST00000392901 KIF5BP33176 963 aa20.41■□□□□ 0.86
SHTN1-203ENST00000392901 ANO1Q5XXA6 986 aa20.41■□□□□ 0.86
SHTN1-203ENST00000392901 CCAR1Q8IX12 1150 aaKnown RBP20.41■□□□□ 0.86
SHTN1-203ENST00000392901 NEDD1Q8NHV4 660 aa20.41■□□□□ 0.86
SHTN1-203ENST00000392901 MRIQ9BWK5 157 aa20.41■□□□□ 0.86
SHTN1-203ENST00000392901 NUP62CLQ9H1M0 184 aa20.41■□□□□ 0.86
SHTN1-203ENST00000392901 GRIPAP1Q4V328 841 aa20.4■□□□□ 0.86
SHTN1-203ENST00000392901 FAM43AQ8N2R8 423 aa20.4■□□□□ 0.86
SHTN1-203ENST00000392901 PPP1R1BQ9UD71 204 aaPredicted RBP20.4■□□□□ 0.86
SHTN1-203ENST00000392901 PCDHA7Q9UN72 937 aa20.4■□□□□ 0.86
SHTN1-203ENST00000392901 FOCADQ5VW36 1801 aa20.4■□□□□ 0.86
SHTN1-203ENST00000392901 CNTNAP5Q8WYK1 1306 aa20.4■□□□□ 0.86
SHTN1-203ENST00000392901 YEATS4O95619 227 aa20.39■□□□□ 0.86
SHTN1-203ENST00000392901 XBP1P17861 261 aa20.39■□□□□ 0.86
SHTN1-203ENST00000392901 TCP10Q12799 353 aa20.39■□□□□ 0.86
SHTN1-203ENST00000392901 NOSTRINQ8IVI9 506 aa20.39■□□□□ 0.86
SHTN1-203ENST00000392901 ZFPM1Q8IX07 1006 aa20.39■□□□□ 0.86
SHTN1-203ENST00000392901 STAG2Q8N3U4 1231 aa20.39■□□□□ 0.86
SHTN1-203ENST00000392901 LARGE2Q8N3Y3 721 aa20.39■□□□□ 0.86
SHTN1-203ENST00000392901 SERPINB13Q9UIV8 391 aa20.39■□□□□ 0.86
SHTN1-203ENST00000392901 SPTLC2O15270 562 aa20.39■□□□□ 0.85
SHTN1-203ENST00000392901 HDLBPQ00341 1268 aaKnown RBP20.39■□□□□ 0.85
SHTN1-203ENST00000392901 GABPAQ06546 454 aa20.39■□□□□ 0.85
SHTN1-203ENST00000392901 NR5A1Q13285 461 aa20.39■□□□□ 0.85
SHTN1-203ENST00000392901 KCNG4Q8TDN1 519 aa20.39■□□□□ 0.85
SHTN1-203ENST00000392901 SHISA4Q96DD7 197 aa20.39■□□□□ 0.85
SHTN1-203ENST00000392901 CEP95Q96GE4 821 aa20.39■□□□□ 0.85
SHTN1-203ENST00000392901 PSMD1Q99460 953 aa20.39■□□□□ 0.85
SHTN1-203ENST00000392901 POLD1P28340 1107 aa20.38■□□□□ 0.85
SHTN1-203ENST00000392901 SERPINA10Q9UK55 444 aa20.38■□□□□ 0.85
SHTN1-203ENST00000392901 BAZ2BQ9UIF8 2168 aaKnown RBP20.38■□□□□ 0.85
SHTN1-203ENST00000392901 RAD17O75943 681 aa20.38■□□□□ 0.85
SHTN1-203ENST00000392901 OXER1Q8TDS5 423 aa20.38■□□□□ 0.85
SHTN1-203ENST00000392901 FOXP1Q9H334 677 aaPredicted RBP20.38■□□□□ 0.85
SHTN1-203ENST00000392901 GOLPH3LQ9H4A5 285 aa20.38■□□□□ 0.85
SHTN1-203ENST00000392901 DDX19AQ9NUU7 478 aaKnown RBP20.38■□□□□ 0.85
SHTN1-203ENST00000392901 PIM2Q9P1W9 311 aa20.38■□□□□ 0.85
SHTN1-203ENST00000392901 MYH6P13533 1939 aa20.38■□□□□ 0.85
SHTN1-203ENST00000392901 HLA-DOAP06340 250 aa20.37■□□□□ 0.85
SHTN1-203ENST00000392901 SLURP2P0DP57 97 aa20.37■□□□□ 0.85
SHTN1-203ENST00000392901 CKAP2LQ8IYA6 745 aa20.37■□□□□ 0.85
SHTN1-203ENST00000392901 TNMDQ9H2S6 317 aa20.37■□□□□ 0.85
SHTN1-203ENST00000392901 MAD2L2Q9UI95 211 aa20.37■□□□□ 0.85
SHTN1-203ENST00000392901 MARCKSP29966 332 aaPredicted RBP20.36■□□□□ 0.85
SHTN1-203ENST00000392901 GRM4Q14833 912 aa20.36■□□□□ 0.85
SHTN1-203ENST00000392901 MAP3K11Q16584 847 aa20.36■□□□□ 0.85
SHTN1-203ENST00000392901 ADALQ6DHV7 355 aa20.36■□□□□ 0.85
SHTN1-203ENST00000392901 MAP3K14Q99558 947 aa20.36■□□□□ 0.85
SHTN1-203ENST00000392901 MTFR1LQ9H019 292 aa20.36■□□□□ 0.85
SHTN1-203ENST00000392901 CLSTN2Q9H4D0 955 aa20.36■□□□□ 0.85
SHTN1-203ENST00000392901 AKR1B1P15121 316 aa20.36■□□□□ 0.85
SHTN1-203ENST00000392901 R3HDM1Q15032 1099 aaKnown RBP20.36■□□□□ 0.85
SHTN1-203ENST00000392901 CCDC73Q6ZRK6 1079 aa20.36■□□□□ 0.85
SHTN1-203ENST00000392901 RASGRP2Q7LDG7 609 aa20.36■□□□□ 0.85
SHTN1-203ENST00000392901 FSIP1Q8NA03 581 aa20.36■□□□□ 0.85
SHTN1-203ENST00000392901 TDRD3Q9H7E2 651 aaKnown RBP20.36■□□□□ 0.85
SHTN1-203ENST00000392901 RRAGDQ9NQL2 400 aaPredicted RBP20.36■□□□□ 0.85
SHTN1-203ENST00000392901 GOLGA8HP0CJ92 632 aa20.35■□□□□ 0.85
SHTN1-203ENST00000392901 VEGFAP15692 232 aaPredicted RBP20.35■□□□□ 0.85
SHTN1-203ENST00000392901 TGFB2P61812 414 aa20.35■□□□□ 0.85
SHTN1-203ENST00000392901 SLC39A14Q15043 492 aa20.35■□□□□ 0.85
SHTN1-203ENST00000392901 CFAP100Q494V2 611 aa20.35■□□□□ 0.85
SHTN1-203ENST00000392901 ZSCAN29Q8IWY8 852 aaPredicted RBP20.35■□□□□ 0.85
SHTN1-203ENST00000392901 KLHL34Q8N239 644 aa20.35■□□□□ 0.85
SHTN1-203ENST00000392901 PHF20Q9BVI0 1012 aa20.35■□□□□ 0.85
SHTN1-203ENST00000392901 SWAP70Q9UH65 585 aa20.35■□□□□ 0.85
SHTN1-203ENST00000392901 SCG2P13521 617 aa20.35■□□□□ 0.85
SHTN1-203ENST00000392901 TRIM44Q96DX7 344 aaPredicted RBP20.35■□□□□ 0.85
SHTN1-203ENST00000392901 PDLIM2Q96JY6 352 aa20.35■□□□□ 0.85
SHTN1-203ENST00000392901 FAM198AQ9UFP1 575 aa20.35■□□□□ 0.85
SHTN1-203ENST00000392901 PSMD14O00487 310 aa20.34■□□□□ 0.85
SHTN1-203ENST00000392901 TOP1P11387 765 aaKnown RBP20.34■□□□□ 0.85
SHTN1-203ENST00000392901 GNAQP50148 359 aa20.34■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms