RNA–Protein interactions for RNA: ENST00000391857.8

RPL13A-201, Transcript of ribosomal protein L13a, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPL13A, Length 1,181 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL13A-201ENST00000391857 C12orf42Q96LP6 360 aa17.72■□□□□ 0.43
RPL13A-201ENST00000391857 RNPC3Q96LT9 517 aaKnown RBP17.72■□□□□ 0.43
RPL13A-201ENST00000391857 RAI14Q9P0K7 980 aa17.72■□□□□ 0.43
RPL13A-201ENST00000391857 BTBD7Q9P203 1132 aa17.72■□□□□ 0.43
RPL13A-201ENST00000391857 MUC3AQ02505 3323 aa17.72■□□□□ 0.43
RPL13A-201ENST00000391857 ADCYAP1R1P41586 468 aa17.71■□□□□ 0.43
RPL13A-201ENST00000391857 TLE2Q04725 743 aa17.71■□□□□ 0.43
RPL13A-201ENST00000391857 ANO1Q5XXA6 986 aa17.71■□□□□ 0.43
RPL13A-201ENST00000391857 CATSPERGQ6ZRH7 1159 aa17.71■□□□□ 0.43
RPL13A-201ENST00000391857 SPATA5Q8NB90 893 aa17.71■□□□□ 0.43
RPL13A-201ENST00000391857 ATXN2LQ8WWM7 1075 aaKnown RBP17.71■□□□□ 0.43
RPL13A-201ENST00000391857 SSH1Q8WYL5 1049 aa17.71■□□□□ 0.43
RPL13A-201ENST00000391857 FAM122AQ96E09 287 aa17.71■□□□□ 0.43
RPL13A-201ENST00000391857 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.7■□□□□ 0.42
RPL13A-201ENST00000391857 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.7■□□□□ 0.42
RPL13A-201ENST00000391857 LBX2Q6XYB7 198 aa17.7■□□□□ 0.42
RPL13A-201ENST00000391857 MAPKAPK5Q8IW41 473 aa17.7■□□□□ 0.42
RPL13A-201ENST00000391857 FERMT2Q96AC1 680 aa17.7■□□□□ 0.42
RPL13A-201ENST00000391857 PALD1Q9ULE6 856 aa17.7■□□□□ 0.42
RPL13A-201ENST00000391857 AKAP2Q9Y2D5 859 aa17.7■□□□□ 0.42
RPL13A-201ENST00000391857 TACC3Q9Y6A5 838 aa17.7■□□□□ 0.42
RPL13A-201ENST00000391857 IVNS1ABPQ9Y6Y0 642 aa17.7■□□□□ 0.42
RPL13A-201ENST00000391857 SEPT4O43236 478 aa17.69■□□□□ 0.42
RPL13A-201ENST00000391857 DNAJB2P25686 324 aa17.69■□□□□ 0.42
RPL13A-201ENST00000391857 TFCP2Q12800 502 aa17.69■□□□□ 0.42
RPL13A-201ENST00000391857 LRRC41Q15345 812 aa17.69■□□□□ 0.42
RPL13A-201ENST00000391857 OLFML2BQ68BL8 750 aa17.69■□□□□ 0.42
RPL13A-201ENST00000391857 CRACR2BQ8N4Y2 399 aaPredicted RBP17.69■□□□□ 0.42
RPL13A-201ENST00000391857 TGFBRAP1Q8WUH2 860 aa17.69■□□□□ 0.42
RPL13A-201ENST00000391857 ASB2Q96Q27 587 aa17.69■□□□□ 0.42
RPL13A-201ENST00000391857 ZNF576Q9H609 170 aa17.69■□□□□ 0.42
RPL13A-201ENST00000391857 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.69■□□□□ 0.42
RPL13A-201ENST00000391857 FRMPD3Q5JV73 1810 aa17.68■□□□□ 0.42
RPL13A-201ENST00000391857 ATAD5Q96QE3 1844 aa17.68■□□□□ 0.42
RPL13A-201ENST00000391857 MYCNP04198 464 aaPredicted RBP17.68■□□□□ 0.42
RPL13A-201ENST00000391857 PPP4CP60510 307 aa17.68■□□□□ 0.42
RPL13A-201ENST00000391857 ZYXQ15942 572 aaKnown RBP17.68■□□□□ 0.42
RPL13A-201ENST00000391857 TRIM34Q9BYJ4 488 aa17.68■□□□□ 0.42
RPL13A-201ENST00000391857 AATFQ9NY61 560 aaKnown RBP eCLIP17.68■□□□□ 0.421e-37■■□□□ 13.1
RPL13A-201ENST00000391857 RLFQ13129 1914 aa17.67■□□□□ 0.42
RPL13A-201ENST00000391857 KIAA0355O15063 1070 aa17.67■□□□□ 0.42
RPL13A-201ENST00000391857 BAG3O95817 575 aa17.67■□□□□ 0.42
RPL13A-201ENST00000391857 GH2P01242 217 aa17.67■□□□□ 0.42
RPL13A-201ENST00000391857 HOXD11P31277 338 aaPredicted RBP17.67■□□□□ 0.42
RPL13A-201ENST00000391857 MAP3K12Q12852 859 aa17.67■□□□□ 0.42
RPL13A-201ENST00000391857 DPP9Q86TI2 863 aa17.67■□□□□ 0.42
RPL13A-201ENST00000391857 ADAMTS19Q8TE59 1207 aa17.67■□□□□ 0.42
RPL13A-201ENST00000391857 NEUROD6Q96NK8 337 aa17.67■□□□□ 0.42
RPL13A-201ENST00000391857 MRS2Q9HD23 443 aa17.67■□□□□ 0.42
RPL13A-201ENST00000391857 LRP2BPQ9P2M1 347 aa17.67■□□□□ 0.42
RPL13A-201ENST00000391857 FLT1P17948 1338 aa17.67■□□□□ 0.42
RPL13A-201ENST00000391857 SPDYE16A6NNV3 312 aaPredicted RBP17.66■□□□□ 0.42
RPL13A-201ENST00000391857 CLTBP09497 229 aa17.66■□□□□ 0.42
RPL13A-201ENST00000391857 VCAM1P19320 739 aa17.66■□□□□ 0.42
RPL13A-201ENST00000391857 ADORA2AP29274 412 aa17.66■□□□□ 0.42
RPL13A-201ENST00000391857 ARID4AP29374 1257 aaPredicted RBP17.66■□□□□ 0.42
RPL13A-201ENST00000391857 PRAMEF19Q5SWL8 479 aa17.66■□□□□ 0.42
RPL13A-201ENST00000391857 PPM1EQ8WY54 764 aa17.66■□□□□ 0.42
RPL13A-201ENST00000391857 TIFAQ96CG3 184 aa17.66■□□□□ 0.42
RPL13A-201ENST00000391857 NOL10Q9BSC4 688 aaKnown RBP17.66■□□□□ 0.42
RPL13A-201ENST00000391857 PHF24Q9UPV7 400 aa17.66■□□□□ 0.42
RPL13A-201ENST00000391857 NCOR1O75376 2440 aa17.66■□□□□ 0.42
RPL13A-201ENST00000391857 DNAH12Q6ZR08 3092 aa17.65■□□□□ 0.42
RPL13A-201ENST00000391857 STRNO43815 780 aa17.65■□□□□ 0.42
RPL13A-201ENST00000391857 COBLO75128 1261 aa17.65■□□□□ 0.42
RPL13A-201ENST00000391857 RAG1P15918 1043 aa17.65■□□□□ 0.42
RPL13A-201ENST00000391857 PLCG2P16885 1265 aa17.65■□□□□ 0.42
RPL13A-201ENST00000391857 MCAMP43121 646 aa17.65■□□□□ 0.42
RPL13A-201ENST00000391857 FPGSQ05932 587 aa17.65■□□□□ 0.42
RPL13A-201ENST00000391857 FAM47AQ5JRC9 791 aa17.65■□□□□ 0.42
RPL13A-201ENST00000391857 AKNAD1Q5T1N1 836 aa17.65■□□□□ 0.42
RPL13A-201ENST00000391857 ACER1Q8TDN7 264 aa17.65■□□□□ 0.42
RPL13A-201ENST00000391857 FEZ1Q99689 392 aa17.65■□□□□ 0.42
RPL13A-201ENST00000391857 MOV10L1Q9BXT6 1211 aaKnown RBP17.65■□□□□ 0.42
RPL13A-201ENST00000391857 KIAA1683Q9H0B3 1180 aa17.65■□□□□ 0.42
RPL13A-201ENST00000391857 THEGQ9P2T0 379 aa17.65■□□□□ 0.42
RPL13A-201ENST00000391857 SIPA1L1O43166 1804 aa17.65■□□□□ 0.42
RPL13A-201ENST00000391857 USP14P54578 494 aa17.64■□□□□ 0.41
RPL13A-201ENST00000391857 MRPS5P82675 430 aaKnown RBP17.64■□□□□ 0.41
RPL13A-201ENST00000391857 NAA16Q6N069 864 aaPredicted RBP17.64■□□□□ 0.41
RPL13A-201ENST00000391857 TATDN1Q6P1N9 297 aa17.64■□□□□ 0.41
RPL13A-201ENST00000391857 ADGRA1Q86SQ6 560 aa17.64■□□□□ 0.41
RPL13A-201ENST00000391857 UHRF1Q96T88 793 aaPredicted RBP17.64■□□□□ 0.41
RPL13A-201ENST00000391857 SAP30BPQ9UHR5 308 aaKnown RBP17.64■□□□□ 0.41
RPL13A-201ENST00000391857 HLA-DOAP06340 250 aa17.63■□□□□ 0.41
RPL13A-201ENST00000391857 GORABQ5T7V8 394 aa17.63■□□□□ 0.41
RPL13A-201ENST00000391857 GAS2L1Q99501 681 aaPredicted RBP17.63■□□□□ 0.41
RPL13A-201ENST00000391857 HDAC5Q9UQL6 1122 aa17.63■□□□□ 0.41
RPL13A-201ENST00000391857 ZNF521Q96K83 1311 aa17.63■□□□□ 0.41
RPL13A-201ENST00000391857 ATF7IPQ6VMQ6 1270 aa17.62■□□□□ 0.41
RPL13A-201ENST00000391857 PRDM12Q9H4Q4 367 aa17.62■□□□□ 0.41
RPL13A-201ENST00000391857 RPAP3Q9H6T3 665 aaPredicted RBP17.62■□□□□ 0.41
RPL13A-201ENST00000391857 TMEM39AQ9NV64 488 aa17.62■□□□□ 0.41
RPL13A-201ENST00000391857 ERCC3P19447 782 aa17.61■□□□□ 0.41
RPL13A-201ENST00000391857 ADGRE1Q14246 886 aa17.61■□□□□ 0.41
RPL13A-201ENST00000391857 RAB3GAP1Q15042 981 aa17.61■□□□□ 0.41
RPL13A-201ENST00000391857 SHCBP1Q8NEM2 672 aa17.61■□□□□ 0.41
RPL13A-201ENST00000391857 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.61■□□□□ 0.411e-16■■□□□ 14.4
RPL13A-201ENST00000391857 PQBP1O60828 265 aaKnown RBP17.6■□□□□ 0.41
RPL13A-201ENST00000391857 UQCRFS1P1P0C7P4 283 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms