RNA–Protein interactions for RNA: ENST00000391827.2

NLRP3-205, Transcript of NLR family pyrin domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene NLRP3, Length 2,940 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLRP3-205ENST00000391827 MECOMQ03112 1051 aa12.36□□□□□ -0.43
NLRP3-205ENST00000391827 GRIN1Q05586 938 aa12.36□□□□□ -0.43
NLRP3-205ENST00000391827 CRNKL1Q9BZJ0 848 aaKnown RBP12.36□□□□□ -0.43
NLRP3-205ENST00000391827 TRIM75PA6NK02 468 aa12.36□□□□□ -0.43
NLRP3-205ENST00000391827 SMIM22K7EJ46 135 aa12.36□□□□□ -0.43
NLRP3-205ENST00000391827 HIBADHP31937 336 aaKnown RBP12.36□□□□□ -0.43
NLRP3-205ENST00000391827 E4F1Q66K89 784 aaPredicted RBP12.36□□□□□ -0.43
NLRP3-205ENST00000391827 VSTM4Q8IW00 320 aa12.36□□□□□ -0.43
NLRP3-205ENST00000391827 FERMT2Q96AC1 680 aa12.36□□□□□ -0.43
NLRP3-205ENST00000391827 TMX1Q9H3N1 280 aa12.36□□□□□ -0.43
NLRP3-205ENST00000391827 CABP5Q9NP86 173 aa12.36□□□□□ -0.43
NLRP3-205ENST00000391827 DCP1AQ9NPI6 582 aaPredicted RBP12.36□□□□□ -0.43
NLRP3-205ENST00000391827 USP17L12C9JPN9 530 aa12.35□□□□□ -0.43
NLRP3-205ENST00000391827 USP17L21D6R901 530 aa12.35□□□□□ -0.43
NLRP3-205ENST00000391827 UBASH3AP57075 661 aa12.35□□□□□ -0.43
NLRP3-205ENST00000391827 CBX1P83916 185 aa12.35□□□□□ -0.43
NLRP3-205ENST00000391827 CCDC82Q8N4S0 544 aa12.35□□□□□ -0.43
NLRP3-205ENST00000391827 ENOX1Q8TC92 643 aaKnown RBP12.35□□□□□ -0.43
NLRP3-205ENST00000391827 SETDB2Q96T68 719 aa12.35□□□□□ -0.43
NLRP3-205ENST00000391827 CNTNAP5Q8WYK1 1306 aa12.35□□□□□ -0.43
NLRP3-205ENST00000391827 BTAF1O14981 1849 aa12.35□□□□□ -0.43
NLRP3-205ENST00000391827 CYP2D7A0A087X1C5 515 aa12.35□□□□□ -0.43
NLRP3-205ENST00000391827 NUTM2BA6NNL0 878 aaPredicted RBP12.35□□□□□ -0.43
NLRP3-205ENST00000391827 NUTM2EB1AL46 878 aaPredicted RBP12.35□□□□□ -0.43
NLRP3-205ENST00000391827 POLR2DO15514 142 aaKnown RBP12.35□□□□□ -0.43
NLRP3-205ENST00000391827 ZNF18P17022 549 aa12.35□□□□□ -0.43
NLRP3-205ENST00000391827 NPY5RQ15761 445 aa12.35□□□□□ -0.43
NLRP3-205ENST00000391827 ISM2Q6H9L7 571 aa12.35□□□□□ -0.43
NLRP3-205ENST00000391827 NUTM2AQ8IVF1 878 aaPredicted RBP12.35□□□□□ -0.43
NLRP3-205ENST00000391827 SMARCE1Q969G3 411 aa12.35□□□□□ -0.43
NLRP3-205ENST00000391827 CSRNP2Q9H175 543 aa12.35□□□□□ -0.43
NLRP3-205ENST00000391827 BRMS1Q9HCU9 246 aa12.35□□□□□ -0.43
NLRP3-205ENST00000391827 SERTAD1Q9UHV2 236 aa12.35□□□□□ -0.43
NLRP3-205ENST00000391827 CCDC88AQ3V6T2 1871 aa12.35□□□□□ -0.43
NLRP3-205ENST00000391827 THSD7AQ9UPZ6 1657 aa12.35□□□□□ -0.43
NLRP3-205ENST00000391827 FOXN1O15353 648 aa12.34□□□□□ -0.43
NLRP3-205ENST00000391827 CCP110O43303 1012 aa12.34□□□□□ -0.43
NLRP3-205ENST00000391827 PLEKHA8P1O95397 391 aa12.34□□□□□ -0.43
NLRP3-205ENST00000391827 KLRK1P26718 216 aa12.34□□□□□ -0.43
NLRP3-205ENST00000391827 PDE4BQ07343 736 aa12.34□□□□□ -0.43
NLRP3-205ENST00000391827 NCBP1Q09161 790 aaKnown RBP12.34□□□□□ -0.43
NLRP3-205ENST00000391827 SH3RF1Q7Z6J0 888 aa12.34□□□□□ -0.43
NLRP3-205ENST00000391827 CCDC34Q96HJ3 373 aa12.34□□□□□ -0.43
NLRP3-205ENST00000391827 FANCLQ9NW38 375 aa12.34□□□□□ -0.43
NLRP3-205ENST00000391827 VPS54Q9P1Q0 977 aa12.34□□□□□ -0.43
NLRP3-205ENST00000391827 SERPINC1P01008 464 aa12.34□□□□□ -0.43
NLRP3-205ENST00000391827 ERCC5P28715 1186 aaPredicted RBP12.34□□□□□ -0.43
NLRP3-205ENST00000391827 TM4SF1P30408 202 aa12.34□□□□□ -0.43
NLRP3-205ENST00000391827 FAM98CQ17RN3 349 aaKnown RBP12.34□□□□□ -0.43
NLRP3-205ENST00000391827 SPECC1Q5M775 1068 aa12.34□□□□□ -0.43
NLRP3-205ENST00000391827 TPTE2Q6XPS3 522 aa12.34□□□□□ -0.43
NLRP3-205ENST00000391827 FCHSD1Q86WN1 690 aa12.34□□□□□ -0.43
NLRP3-205ENST00000391827 NBPF5PQ86XG9 351 aaPredicted RBP12.34□□□□□ -0.43
NLRP3-205ENST00000391827 DPF2Q92785 391 aa12.34□□□□□ -0.43
NLRP3-205ENST00000391827 TRAPPC10P48553 1259 aa12.34□□□□□ -0.43
NLRP3-205ENST00000391827 SPTY2D1Q68D10 685 aaPredicted RBP12.34□□□□□ -0.43
NLRP3-205ENST00000391827 BICDL1Q6ZP65 573 aa12.34□□□□□ -0.43
NLRP3-205ENST00000391827 KIF18AQ8NI77 898 aa12.34□□□□□ -0.43
NLRP3-205ENST00000391827 PPP1R13BQ96KQ4 1090 aa12.34□□□□□ -0.43
NLRP3-205ENST00000391827 V9GY48 417 aaPredicted RBP12.34□□□□□ -0.43
NLRP3-205ENST00000391827 ROBO3Q96MS0 1386 aa12.33□□□□□ -0.44
NLRP3-205ENST00000391827 PRR29P0C7W0 189 aa12.33□□□□□ -0.44
NLRP3-205ENST00000391827 CTCFLQ8NI51 663 aaPredicted RBP12.33□□□□□ -0.44
NLRP3-205ENST00000391827 TAOK2Q9UL54 1235 aa12.33□□□□□ -0.44
NLRP3-205ENST00000391827 LY75O60449 1722 aa12.33□□□□□ -0.44
NLRP3-205ENST00000391827 TNRC6CQ9HCJ0 1690 aaKnown RBP12.33□□□□□ -0.44
NLRP3-205ENST00000391827 PRDM1O75626 825 aa12.33□□□□□ -0.44
NLRP3-205ENST00000391827 SLFN14P0C7P3 912 aa12.33□□□□□ -0.44
NLRP3-205ENST00000391827 TBX2Q13207 712 aaPredicted RBP12.33□□□□□ -0.44
NLRP3-205ENST00000391827 CFAP100Q494V2 611 aa12.33□□□□□ -0.44
NLRP3-205ENST00000391827 EARS2Q5JPH6 523 aaKnown RBP12.33□□□□□ -0.44
NLRP3-205ENST00000391827 TEX2Q8IWB9 1127 aa12.33□□□□□ -0.44
NLRP3-205ENST00000391827 PDCL2Q8N4E4 241 aa12.33□□□□□ -0.44
NLRP3-205ENST00000391827 ANKS1AQ92625 1134 aa12.33□□□□□ -0.44
NLRP3-205ENST00000391827 INTS13Q9NVM9 706 aa12.33□□□□□ -0.44
NLRP3-205ENST00000391827 MKRN1Q9UHC7 482 aaKnown RBP12.33□□□□□ -0.44
NLRP3-205ENST00000391827 ZPR1O75312 459 aa12.32□□□□□ -0.44
NLRP3-205ENST00000391827 PRDX5P30044 214 aa12.32□□□□□ -0.44
NLRP3-205ENST00000391827 PLCD1P51178 756 aa12.32□□□□□ -0.44
NLRP3-205ENST00000391827 ATP2C1P98194 919 aaPredicted RBP12.32□□□□□ -0.44
NLRP3-205ENST00000391827 SBF2Q86WG5 1849 aa12.32□□□□□ -0.44
NLRP3-205ENST00000391827 TAF1LQ8IZX4 1826 aa12.32□□□□□ -0.44
NLRP3-205ENST00000391827 FAM205CA6NFA0 338 aa12.32□□□□□ -0.44
NLRP3-205ENST00000391827 SRBD1Q8N5C6 995 aaKnown RBP12.32□□□□□ -0.44
NLRP3-205ENST00000391827 L2HGDHQ9H9P8 463 aa12.32□□□□□ -0.44
NLRP3-205ENST00000391827 TRMT1Q9NXH9 659 aaKnown RBP12.32□□□□□ -0.44
NLRP3-205ENST00000391827 SRP68Q9UHB9 627 aaKnown RBP12.32□□□□□ -0.44
NLRP3-205ENST00000391827 TOP1P11387 765 aaKnown RBP12.31□□□□□ -0.44
NLRP3-205ENST00000391827 SCG2P13521 617 aa12.31□□□□□ -0.44
NLRP3-205ENST00000391827 FMR1Q06787 632 aaKnown RBP eCLIP12.31□□□□□ -0.44
NLRP3-205ENST00000391827 PFKFB3Q16875 520 aaPredicted RBP12.31□□□□□ -0.44
NLRP3-205ENST00000391827 C15orf52Q6ZUT6 534 aaKnown RBP12.31□□□□□ -0.44
NLRP3-205ENST00000391827 USP49Q70CQ1 688 aa12.31□□□□□ -0.44
NLRP3-205ENST00000391827 DGKHQ86XP1 1220 aa12.31□□□□□ -0.44
NLRP3-205ENST00000391827 PYM1Q9BRP8 204 aaKnown RBP12.31□□□□□ -0.44
NLRP3-205ENST00000391827 CGNQ9P2M7 1197 aaKnown RBP12.31□□□□□ -0.44
NLRP3-205ENST00000391827 KIF5BP33176 963 aa12.31□□□□□ -0.44
NLRP3-205ENST00000391827 TTC38Q5R3I4 469 aa12.31□□□□□ -0.44
NLRP3-205ENST00000391827 RCSD1Q6JBY9 416 aa12.31□□□□□ -0.44
NLRP3-205ENST00000391827 GSDMAQ96QA5 445 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms