RNA–Protein interactions for RNA: ENST00000391085.1

RNU6-1055P-201, Transcript of RNA, U6 small nuclear 1055, pseudogene, humanhuman

BASIC

Gene RNU6-1055P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1055P-201ENST00000391085 USP50Q70EL3 339 aaPredicted RBP8.41□□□□□ -1.06
RNU6-1055P-201ENST00000391085 CDAN1Q8IWY9 1227 aa8.41□□□□□ -1.06
RNU6-1055P-201ENST00000391085 PNMA1Q8ND90 353 aa8.41□□□□□ -1.06
RNU6-1055P-201ENST00000391085 L3MBTL3Q96JM7 780 aaPredicted RBP8.41□□□□□ -1.06
RNU6-1055P-201ENST00000391085 TMEM47Q9BQJ4 181 aa8.41□□□□□ -1.06
RNU6-1055P-201ENST00000391085 LLPHQ9BRT6 129 aaKnown RBP8.41□□□□□ -1.06
RNU6-1055P-201ENST00000391085 DNAJC18Q9H819 358 aa8.41□□□□□ -1.06
RNU6-1055P-201ENST00000391085 IL17RBQ9NRM6 502 aa8.41□□□□□ -1.06
RNU6-1055P-201ENST00000391085 CLEC11AQ9Y240 323 aa8.41□□□□□ -1.06
RNU6-1055P-201ENST00000391085 PPP2R3BQ9Y5P8 575 aa8.41□□□□□ -1.06
RNU6-1055P-201ENST00000391085 CHD4Q14839 1912 aa8.41□□□□□ -1.06
RNU6-1055P-201ENST00000391085 TBC1D12O60347 775 aa8.4□□□□□ -1.06
RNU6-1055P-201ENST00000391085 JAK2O60674 1132 aa8.4□□□□□ -1.06
RNU6-1055P-201ENST00000391085 PPFIA3O75145 1194 aa8.4□□□□□ -1.06
RNU6-1055P-201ENST00000391085 GH2P01242 217 aa8.4□□□□□ -1.06
RNU6-1055P-201ENST00000391085 KIF5BP33176 963 aa8.4□□□□□ -1.06
RNU6-1055P-201ENST00000391085 ADD1P35611 737 aaKnown RBP8.4□□□□□ -1.06
RNU6-1055P-201ENST00000391085 NUCB2P80303 420 aa8.4□□□□□ -1.06
RNU6-1055P-201ENST00000391085 HMGN5P82970 282 aaKnown RBP8.4□□□□□ -1.06
RNU6-1055P-201ENST00000391085 AKAP17AQ02040 695 aaKnown RBP8.4□□□□□ -1.06
RNU6-1055P-201ENST00000391085 ICA1Q05084 483 aa8.4□□□□□ -1.06
RNU6-1055P-201ENST00000391085 SSRP1Q08945 709 aaKnown RBP8.4□□□□□ -1.06
RNU6-1055P-201ENST00000391085 ST3GAL1Q11201 340 aa8.4□□□□□ -1.06
RNU6-1055P-201ENST00000391085 SUPT20HL1Q3ZLR7 823 aa8.4□□□□□ -1.06
RNU6-1055P-201ENST00000391085 NBPF12Q5TAG4 269 aaPredicted RBP8.4□□□□□ -1.06
RNU6-1055P-201ENST00000391085 FOXD4L5Q5VV16 416 aaPredicted RBP8.4□□□□□ -1.06
RNU6-1055P-201ENST00000391085 PRAMEF18Q5VWM3 479 aa8.4□□□□□ -1.06
RNU6-1055P-201ENST00000391085 PNMA8AQ86V59 439 aaPredicted RBP8.4□□□□□ -1.06
RNU6-1055P-201ENST00000391085 TRIM22Q8IYM9 498 aa8.4□□□□□ -1.06
RNU6-1055P-201ENST00000391085 LRRC47Q8N1G4 583 aaKnown RBP8.4□□□□□ -1.06
RNU6-1055P-201ENST00000391085 CCDC82Q8N4S0 544 aa8.4□□□□□ -1.06
RNU6-1055P-201ENST00000391085 FANCBQ8NB91 859 aa8.4□□□□□ -1.06
RNU6-1055P-201ENST00000391085 FOXD4L4Q8WXT5 416 aaPredicted RBP8.4□□□□□ -1.06
RNU6-1055P-201ENST00000391085 KANSL2Q9H9L4 492 aa8.4□□□□□ -1.06
RNU6-1055P-201ENST00000391085 RBM28Q9NW13 759 aaKnown RBP8.4□□□□□ -1.06
RNU6-1055P-201ENST00000391085 MTMR4Q9NYA4 1195 aa8.4□□□□□ -1.06
RNU6-1055P-201ENST00000391085 CIZ1Q9ULV3 898 aaPredicted RBP8.4□□□□□ -1.06
RNU6-1055P-201ENST00000391085 HPS5Q9UPZ3 1129 aa8.4□□□□□ -1.06
RNU6-1055P-201ENST00000391085 MYH2Q9UKX2 1941 aa8.4□□□□□ -1.06
RNU6-1055P-201ENST00000391085 PLIN4Q96Q06 1357 aa8.39□□□□□ -1.07
RNU6-1055P-201ENST00000391085 NAV1Q8NEY1 1877 aa8.39□□□□□ -1.07
RNU6-1055P-201ENST00000391085 PITPNM2Q9BZ72 1349 aa8.39□□□□□ -1.07
RNU6-1055P-201ENST00000391085 VPS37CA5D8V6 355 aaPredicted RBP8.39□□□□□ -1.07
RNU6-1055P-201ENST00000391085 ADM5C9JUS6 153 aa8.39□□□□□ -1.07
RNU6-1055P-201ENST00000391085 H3BQV1 296 aa8.39□□□□□ -1.07
RNU6-1055P-201ENST00000391085 PDCP20941 246 aa8.39□□□□□ -1.07
RNU6-1055P-201ENST00000391085 CDC27P30260 824 aa8.39□□□□□ -1.07
RNU6-1055P-201ENST00000391085 FOSBP53539 338 aa8.39□□□□□ -1.07
RNU6-1055P-201ENST00000391085 RCAN1P53805 252 aa8.39□□□□□ -1.07
RNU6-1055P-201ENST00000391085 PRKG1Q13976 671 aa8.39□□□□□ -1.07
RNU6-1055P-201ENST00000391085 TRIM29Q14134 588 aa8.39□□□□□ -1.07
RNU6-1055P-201ENST00000391085 SEPT2Q15019 361 aa8.39□□□□□ -1.07
RNU6-1055P-201ENST00000391085 PPP2R5BQ15173 497 aa8.39□□□□□ -1.07
RNU6-1055P-201ENST00000391085 IFFO2Q5TF58 517 aa8.39□□□□□ -1.07
RNU6-1055P-201ENST00000391085 LARP1BQ659C4 914 aaKnown RBP8.39□□□□□ -1.07
RNU6-1055P-201ENST00000391085 RCSD1Q6JBY9 416 aa8.39□□□□□ -1.07
RNU6-1055P-201ENST00000391085 KRT26Q7Z3Y9 468 aa8.39□□□□□ -1.07
RNU6-1055P-201ENST00000391085 METTL16Q86W50 562 aaKnown RBP8.39□□□□□ -1.07
RNU6-1055P-201ENST00000391085 CLEC10AQ8IUN9 316 aa8.39□□□□□ -1.07
RNU6-1055P-201ENST00000391085 NSUN7Q8NE18 718 aaKnown RBP8.39□□□□□ -1.07
RNU6-1055P-201ENST00000391085 ZNF526Q8TF50 670 aaPredicted RBP8.39□□□□□ -1.07
RNU6-1055P-201ENST00000391085 ANKS1AQ92625 1134 aa8.39□□□□□ -1.07
RNU6-1055P-201ENST00000391085 TEPSINQ96N21 525 aa8.39□□□□□ -1.07
RNU6-1055P-201ENST00000391085 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.39□□□□□ -1.07
RNU6-1055P-201ENST00000391085 SLC26A6Q9BXS9 759 aa8.39□□□□□ -1.07
RNU6-1055P-201ENST00000391085 ZNF341Q9BYN7 854 aa8.39□□□□□ -1.07
RNU6-1055P-201ENST00000391085 TAF1DQ9H5J8 278 aaPredicted RBP8.39□□□□□ -1.07
RNU6-1055P-201ENST00000391085 ARHGEF10LQ9HCE6 1279 aa8.39□□□□□ -1.07
RNU6-1055P-201ENST00000391085 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.39□□□□□ -1.07
RNU6-1055P-201ENST00000391085 ZNF646O15015 1829 aaPredicted RBP8.38□□□□□ -1.07
RNU6-1055P-201ENST00000391085 WDR33Q9C0J8 1336 aaKnown RBP8.38□□□□□ -1.07
RNU6-1055P-201ENST00000391085 IGKV6D-41A0A0C4DH26 115 aa8.38□□□□□ -1.07
RNU6-1055P-201ENST00000391085 CTDNEP1O95476 244 aa8.38□□□□□ -1.07
RNU6-1055P-201ENST00000391085 PARP1P09874 1014 aaKnown RBP8.38□□□□□ -1.07
RNU6-1055P-201ENST00000391085 EEF2P13639 858 aaKnown RBP8.38□□□□□ -1.07
RNU6-1055P-201ENST00000391085 NF2P35240 595 aa8.38□□□□□ -1.07
RNU6-1055P-201ENST00000391085 CAP2P40123 477 aa8.38□□□□□ -1.07
RNU6-1055P-201ENST00000391085 GNAQP50148 359 aa8.38□□□□□ -1.07
RNU6-1055P-201ENST00000391085 TROAPQ12815 778 aa8.38□□□□□ -1.07
RNU6-1055P-201ENST00000391085 TTLL12Q14166 644 aaPredicted RBP8.38□□□□□ -1.07
RNU6-1055P-201ENST00000391085 CCDC96Q2M329 555 aa8.38□□□□□ -1.07
RNU6-1055P-201ENST00000391085 SHROOM1Q2M3G4 852 aaPredicted RBP8.38□□□□□ -1.07
RNU6-1055P-201ENST00000391085 USP48Q86UV5 1035 aa8.38□□□□□ -1.07
RNU6-1055P-201ENST00000391085 CMTR1Q8N1G2 835 aaKnown RBP8.38□□□□□ -1.07
RNU6-1055P-201ENST00000391085 ZC3H15Q8WU90 426 aaKnown RBP8.38□□□□□ -1.07
RNU6-1055P-201ENST00000391085 WASF1Q92558 559 aa8.38□□□□□ -1.07
RNU6-1055P-201ENST00000391085 PHKBQ93100 1093 aa8.38□□□□□ -1.07
RNU6-1055P-201ENST00000391085 WRNIP1Q96S55 665 aa8.38□□□□□ -1.07
RNU6-1055P-201ENST00000391085 RRAGCQ9HB90 399 aa8.38□□□□□ -1.07
RNU6-1055P-201ENST00000391085 PICK1Q9NRD5 415 aa8.38□□□□□ -1.07
RNU6-1055P-201ENST00000391085 ORC3Q9UBD5 711 aaPredicted RBP8.38□□□□□ -1.07
RNU6-1055P-201ENST00000391085 PGAP2Q9UHJ9 254 aa8.38□□□□□ -1.07
RNU6-1055P-201ENST00000391085 ZBTB21Q9ULJ3 1066 aa8.38□□□□□ -1.07
RNU6-1055P-201ENST00000391085 LAMA4Q16363 1823 aa8.38□□□□□ -1.07
RNU6-1055P-201ENST00000391085 DDX60LQ5H9U9 1706 aaKnown RBP8.37□□□□□ -1.07
RNU6-1055P-201ENST00000391085 FRMPD2Q68DX3 1309 aaPredicted RBP8.37□□□□□ -1.07
RNU6-1055P-201ENST00000391085 STX6O43752 255 aa8.37□□□□□ -1.07
RNU6-1055P-201ENST00000391085 PPP1R12BO60237 982 aaPredicted RBP8.37□□□□□ -1.07
RNU6-1055P-201ENST00000391085 PLEKHA8P1O95397 391 aa8.37□□□□□ -1.07
RNU6-1055P-201ENST00000391085 FMNL1O95466 1100 aaPredicted RBP8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms