RNA–Protein interactions for RNA: ENST00000390654.7

COL23A1-201, Transcript of collagen type XXIII alpha 1 chain, humanhuman

APPRIS P2 TSL 5 BASIC

Gene COL23A1, Length 3,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1-201ENST00000390654 SMC1AQ14683 1233 aaKnown RBP23.87■■□□□ 1.41
COL23A1-201ENST00000390654 FCHSD1Q86WN1 690 aa23.87■■□□□ 1.41
COL23A1-201ENST00000390654 CDC5LQ99459 802 aaKnown RBP23.87■■□□□ 1.41
COL23A1-201ENST00000390654 SUGCTQ9HAC7 445 aa23.87■■□□□ 1.41
COL23A1-201ENST00000390654 ARFGAP3Q9NP61 516 aa23.87■■□□□ 1.41
COL23A1-201ENST00000390654 CDHR2Q9BYE9 1310 aa23.87■■□□□ 1.41
COL23A1-201ENST00000390654 SYNRGQ9UMZ2 1314 aa23.87■■□□□ 1.41
COL23A1-201ENST00000390654 PPARAQ07869 468 aa23.87■■□□□ 1.41
COL23A1-201ENST00000390654 DPYDQ12882 1025 aa23.87■■□□□ 1.41
COL23A1-201ENST00000390654 VPS16Q9H269 839 aa23.87■■□□□ 1.41
COL23A1-201ENST00000390654 CTNND2Q9UQB3 1225 aa23.87■■□□□ 1.41
COL23A1-201ENST00000390654 SOS2Q07890 1332 aaPredicted RBP23.86■■□□□ 1.41
COL23A1-201ENST00000390654 STK36Q9NRP7 1315 aa23.86■■□□□ 1.41
COL23A1-201ENST00000390654 EXOC5O00471 708 aa23.86■■□□□ 1.41
COL23A1-201ENST00000390654 FGFR2P21802 821 aa23.86■■□□□ 1.41
COL23A1-201ENST00000390654 CYP2C19P33261 490 aa23.86■■□□□ 1.41
COL23A1-201ENST00000390654 PAGE5Q96GU1 130 aa23.86■■□□□ 1.41
COL23A1-201ENST00000390654 RNF216Q9NWF9 866 aaPredicted RBP23.86■■□□□ 1.41
COL23A1-201ENST00000390654 MYH7P12883 1935 aa23.86■■□□□ 1.41
COL23A1-201ENST00000390654 RHOXF2BP0C7M4 288 aa23.85■■□□□ 1.41
COL23A1-201ENST00000390654 GYG1P46976 350 aa23.85■■□□□ 1.41
COL23A1-201ENST00000390654 FXR1P51114 621 aaKnown RBP eCLIP23.85■■□□□ 1.41
COL23A1-201ENST00000390654 ALX1Q15699 326 aa23.85■■□□□ 1.41
COL23A1-201ENST00000390654 EEF2KMTQ96G04 330 aa23.85■■□□□ 1.41
COL23A1-201ENST00000390654 ZNF512BQ96KM6 892 aaPredicted RBP23.85■■□□□ 1.41
COL23A1-201ENST00000390654 RHOXF2Q9BQY4 288 aa23.85■■□□□ 1.41
COL23A1-201ENST00000390654 KIF4BQ2VIQ3 1234 aa23.85■■□□□ 1.41
COL23A1-201ENST00000390654 GPR161Q8N6U8 529 aaKnown RBP23.85■■□□□ 1.41
COL23A1-201ENST00000390654 ADGRG1Q9Y653 693 aa23.85■■□□□ 1.41
COL23A1-201ENST00000390654 A0A1B0GTH6 734 aa23.85■■□□□ 1.41
COL23A1-201ENST00000390654 PES1O00541 588 aaKnown RBP23.85■■□□□ 1.41
COL23A1-201ENST00000390654 DYNLL1P63167 89 aaKnown RBP23.85■■□□□ 1.41
COL23A1-201ENST00000390654 NT5DC1Q5TFE4 455 aa23.85■■□□□ 1.41
COL23A1-201ENST00000390654 STAG1Q8WVM7 1258 aa23.85■■□□□ 1.41
COL23A1-201ENST00000390654 NIP7Q9Y221 180 aaKnown RBP eCLIP23.85■■□□□ 1.41
COL23A1-201ENST00000390654 NMT2O60551 498 aa23.84■■□□□ 1.41
COL23A1-201ENST00000390654 ATP6V1AP38606 617 aa23.84■■□□□ 1.41
COL23A1-201ENST00000390654 GOLGA1Q92805 767 aa23.84■■□□□ 1.41
COL23A1-201ENST00000390654 ZKSCAN7Q9P0L1 754 aaPredicted RBP23.84■■□□□ 1.41
COL23A1-201ENST00000390654 MTMR7Q9Y216 660 aa23.84■■□□□ 1.41
COL23A1-201ENST00000390654 VEGFAP15692 232 aaPredicted RBP23.84■■□□□ 1.41
COL23A1-201ENST00000390654 ATRNO75882 1429 aa23.84■■□□□ 1.41
COL23A1-201ENST00000390654 RNF225M0QZC1 329 aaPredicted RBP23.83■■□□□ 1.41
COL23A1-201ENST00000390654 ADAMTS3O15072 1205 aa23.83■■□□□ 1.41
COL23A1-201ENST00000390654 CHMP4BP1P59074 171 aa23.83■■□□□ 1.41
COL23A1-201ENST00000390654 CEP131Q9UPN4 1083 aa23.83■■□□□ 1.41
COL23A1-201ENST00000390654 TNS2Q63HR2 1409 aa23.83■■□□□ 1.41
COL23A1-201ENST00000390654 CCDC196A0A1B0GTZ2 297 aa23.83■■□□□ 1.41
COL23A1-201ENST00000390654 RSRC2Q7L4I2 434 aaKnown RBP23.83■■□□□ 1.41
COL23A1-201ENST00000390654 APTXQ7Z2E3 356 aaKnown RBP23.83■■□□□ 1.41
COL23A1-201ENST00000390654 GOLGA6L9A6NEM1 432 aa23.82■■□□□ 1.4
COL23A1-201ENST00000390654 PKN1Q16512 942 aa23.82■■□□□ 1.4
COL23A1-201ENST00000390654 LONRF2Q1L5Z9 754 aa23.82■■□□□ 1.4
COL23A1-201ENST00000390654 SPATA1Q5VX52 437 aa23.82■■□□□ 1.4
COL23A1-201ENST00000390654 ENAHQ8N8S7 591 aaPredicted RBP23.82■■□□□ 1.4
COL23A1-201ENST00000390654 TAB2Q9NYJ8 693 aa23.82■■□□□ 1.4
COL23A1-201ENST00000390654 TFR2Q9UP52 801 aa23.82■■□□□ 1.4
COL23A1-201ENST00000390654 MROH5Q6ZUA9 1318 aa23.82■■□□□ 1.4
COL23A1-201ENST00000390654 KIF5CO60282 957 aa23.82■■□□□ 1.4
COL23A1-201ENST00000390654 N4BP3O15049 544 aa23.81■■□□□ 1.4
COL23A1-201ENST00000390654 KRT2P35908 639 aa23.81■■□□□ 1.4
COL23A1-201ENST00000390654 PTGDRQ13258 359 aa23.81■■□□□ 1.4
COL23A1-201ENST00000390654 RRAGBQ5VZM2 374 aa23.81■■□□□ 1.4
COL23A1-201ENST00000390654 SLC35F6Q8N357 371 aa23.81■■□□□ 1.4
COL23A1-201ENST00000390654 DCCP43146 1447 aa23.81■■□□□ 1.4
COL23A1-201ENST00000390654 TPM1P09493 284 aa23.81■■□□□ 1.4
COL23A1-201ENST00000390654 MCM7P33993 719 aa23.81■■□□□ 1.4
COL23A1-201ENST00000390654 PLIN2Q99541 437 aa23.81■■□□□ 1.4
COL23A1-201ENST00000390654 FUT8Q9BYC5 575 aa23.81■■□□□ 1.4
COL23A1-201ENST00000390654 ADD3Q9UEY8 706 aaKnown RBP23.81■■□□□ 1.4
COL23A1-201ENST00000390654 GYPCP04921 128 aa23.8■■□□□ 1.4
COL23A1-201ENST00000390654 IFIT1BQ5T764 474 aaKnown RBP23.8■■□□□ 1.4
COL23A1-201ENST00000390654 H3BQF6 201 aa23.8■■□□□ 1.4
COL23A1-201ENST00000390654 MYO1BO43795 1136 aa23.8■■□□□ 1.4
COL23A1-201ENST00000390654 KANK3Q6NY19 840 aa23.8■■□□□ 1.4
COL23A1-201ENST00000390654 PIK3AP1Q6ZUJ8 805 aa23.8■■□□□ 1.4
COL23A1-201ENST00000390654 PNKPQ96T60 521 aa23.8■■□□□ 1.4
COL23A1-201ENST00000390654 NUP88Q99567 741 aaPredicted RBP23.8■■□□□ 1.4
COL23A1-201ENST00000390654 ERCC5P28715 1186 aaPredicted RBP23.8■■□□□ 1.4
COL23A1-201ENST00000390654 IGHMBP2P38935 993 aaKnown RBP23.8■■□□□ 1.4
COL23A1-201ENST00000390654 CUL4BQ13620 913 aa23.8■■□□□ 1.4
COL23A1-201ENST00000390654 FAM47AQ5JRC9 791 aa23.8■■□□□ 1.4
COL23A1-201ENST00000390654 ESR2Q92731 530 aa23.8■■□□□ 1.4
COL23A1-201ENST00000390654 SLF1Q9BQI6 1058 aa23.8■■□□□ 1.4
COL23A1-201ENST00000390654 PPP1R3GB7ZBB8 358 aa23.79■■□□□ 1.4
COL23A1-201ENST00000390654 TXLNAP40222 546 aa23.79■■□□□ 1.4
COL23A1-201ENST00000390654 ZNF579Q8NAF0 562 aaKnown RBP23.79■■□□□ 1.4
COL23A1-201ENST00000390654 RABGGTAQ92696 567 aa23.79■■□□□ 1.4
COL23A1-201ENST00000390654 TRIM10Q9UDY6 481 aa23.79■■□□□ 1.4
COL23A1-201ENST00000390654 ECM29Q5VYK3 1845 aa23.79■■□□□ 1.4
COL23A1-201ENST00000390654 MFAP3LO75121 409 aa23.79■■□□□ 1.4
COL23A1-201ENST00000390654 PHACTR2O75167 634 aa23.79■■□□□ 1.4
COL23A1-201ENST00000390654 CHRNDQ07001 517 aa23.79■■□□□ 1.4
COL23A1-201ENST00000390654 TAF3Q5VWG9 929 aa23.79■■□□□ 1.4
COL23A1-201ENST00000390654 TRIML1Q8N9V2 468 aa23.79■■□□□ 1.4
COL23A1-201ENST00000390654 XBP1P17861 261 aa23.78■■□□□ 1.4
COL23A1-201ENST00000390654 CRKLP46109 303 aaKnown RBP23.78■■□□□ 1.4
COL23A1-201ENST00000390654 LMAN1P49257 510 aa23.78■■□□□ 1.4
COL23A1-201ENST00000390654 FILIP1LQ4L180 1135 aa23.78■■□□□ 1.4
COL23A1-201ENST00000390654 SPATA20Q8TB22 786 aa23.78■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms