RNA–Protein interactions for RNA: ENST00000390625.3

IGHV3-49-201, Transcript of immunoglobulin heavy variable 3-49, humanhuman

APPRIS P1 BASIC

Gene IGHV3-49, Length 439 nt, Biotype IG V gene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-49-201ENST00000390625 GNAI3P08754 354 aa16.8■□□□□ 0.28
IGHV3-49-201ENST00000390625 UQCRFS1P1P0C7P4 283 aa16.8■□□□□ 0.28
IGHV3-49-201ENST00000390625 CYP7A1P22680 504 aa16.8■□□□□ 0.28
IGHV3-49-201ENST00000390625 PTPREP23469 700 aa16.8■□□□□ 0.28
IGHV3-49-201ENST00000390625 CNGA1P29973 690 aa16.8■□□□□ 0.28
IGHV3-49-201ENST00000390625 G3BP1Q13283 466 aaKnown RBP eCLIP16.8■□□□□ 0.28
IGHV3-49-201ENST00000390625 SHHQ15465 462 aa16.8■□□□□ 0.28
IGHV3-49-201ENST00000390625 TNNI3KQ59H18 835 aa16.8■□□□□ 0.28
IGHV3-49-201ENST00000390625 TTC39AQ5SRH9 613 aa16.8■□□□□ 0.28
IGHV3-49-201ENST00000390625 EDC3Q96F86 508 aaKnown RBP16.8■□□□□ 0.28
IGHV3-49-201ENST00000390625 FPGT-TNNI3KV9GXZ4 949 aa16.8■□□□□ 0.28
IGHV3-49-201ENST00000390625 ZNFX1Q9P2E3 1918 aaKnown RBP16.8■□□□□ 0.28
IGHV3-49-201ENST00000390625 VCAM1P19320 739 aa16.79■□□□□ 0.28
IGHV3-49-201ENST00000390625 RTP1P59025 263 aa16.79■□□□□ 0.28
IGHV3-49-201ENST00000390625 KIAA1755Q5JYT7 1200 aa16.79■□□□□ 0.28
IGHV3-49-201ENST00000390625 PRAMEF19Q5SWL8 479 aa16.79■□□□□ 0.28
IGHV3-49-201ENST00000390625 CATSPERGQ6ZRH7 1159 aa16.79■□□□□ 0.28
IGHV3-49-201ENST00000390625 SH3RF1Q7Z6J0 888 aa16.79■□□□□ 0.28
IGHV3-49-201ENST00000390625 CCAR1Q8IX12 1150 aaKnown RBP16.79■□□□□ 0.28
IGHV3-49-201ENST00000390625 NOL10Q9BSC4 688 aaKnown RBP16.79■□□□□ 0.28
IGHV3-49-201ENST00000390625 CCDC8Q9H0W5 538 aaPredicted RBP16.79■□□□□ 0.28
IGHV3-49-201ENST00000390625 ANTXR1Q9H6X2 564 aa16.79■□□□□ 0.28
IGHV3-49-201ENST00000390625 DDX20Q9UHI6 824 aaKnown RBP16.79■□□□□ 0.28
IGHV3-49-201ENST00000390625 RABGAP1Q9Y3P9 1069 aa16.79■□□□□ 0.28
IGHV3-49-201ENST00000390625 SPDYE16A6NNV3 312 aaPredicted RBP16.78■□□□□ 0.28
IGHV3-49-201ENST00000390625 BAG3O95817 575 aa16.78■□□□□ 0.28
IGHV3-49-201ENST00000390625 GNAI2P04899 355 aa16.78■□□□□ 0.28
IGHV3-49-201ENST00000390625 PLCD1P51178 756 aa16.78■□□□□ 0.28
IGHV3-49-201ENST00000390625 C12orf42Q96LP6 360 aa16.78■□□□□ 0.28
IGHV3-49-201ENST00000390625 CDX2Q99626 313 aaPredicted RBP16.78■□□□□ 0.28
IGHV3-49-201ENST00000390625 TRIM34Q9BYJ4 488 aa16.78■□□□□ 0.28
IGHV3-49-201ENST00000390625 DBNLQ9UJU6 430 aaKnown RBP16.78■□□□□ 0.28
IGHV3-49-201ENST00000390625 ATP11BQ9Y2G3 1177 aa16.78■□□□□ 0.28
IGHV3-49-201ENST00000390625 USP17L15C9J2P7 530 aa16.77■□□□□ 0.28
IGHV3-49-201ENST00000390625 USP17L13C9JLJ4 530 aa16.77■□□□□ 0.28
IGHV3-49-201ENST00000390625 USP17L11C9JVI0 530 aa16.77■□□□□ 0.28
IGHV3-49-201ENST00000390625 USP17L18D6R9N7 530 aa16.77■□□□□ 0.28
IGHV3-49-201ENST00000390625 USP17L22D6RA61 530 aa16.77■□□□□ 0.28
IGHV3-49-201ENST00000390625 USP17L17D6RBQ6 530 aa16.77■□□□□ 0.28
IGHV3-49-201ENST00000390625 USP17L19D6RCP7 530 aa16.77■□□□□ 0.28
IGHV3-49-201ENST00000390625 USP17L20D6RJB6 530 aa16.77■□□□□ 0.28
IGHV3-49-201ENST00000390625 SMIM22K7EJ46 135 aa16.77■□□□□ 0.28
IGHV3-49-201ENST00000390625 SHMT1P34896 483 aa16.77■□□□□ 0.28
IGHV3-49-201ENST00000390625 USP17L24Q0WX57 530 aa16.77■□□□□ 0.28
IGHV3-49-201ENST00000390625 RAB3GAP1Q15042 981 aa16.77■□□□□ 0.28
IGHV3-49-201ENST00000390625 TATDN1Q6P1N9 297 aa16.77■□□□□ 0.28
IGHV3-49-201ENST00000390625 TRMT44Q8IYL2 757 aaKnown RBP16.77■□□□□ 0.28
IGHV3-49-201ENST00000390625 FEZ1Q99689 392 aa16.77■□□□□ 0.28
IGHV3-49-201ENST00000390625 TTYH1Q9H313 450 aaPredicted RBP16.77■□□□□ 0.28
IGHV3-49-201ENST00000390625 NAV1Q8NEY1 1877 aa16.76■□□□□ 0.27
IGHV3-49-201ENST00000390625 COL11A1P12107 1806 aaPredicted RBP16.76■□□□□ 0.27
IGHV3-49-201ENST00000390625 PARP14Q460N5 1801 aa16.76■□□□□ 0.27
IGHV3-49-201ENST00000390625 A0A1W2PRG0 241 aa16.76■□□□□ 0.27
IGHV3-49-201ENST00000390625 SLC15A5A6NIM6 579 aa16.76■□□□□ 0.27
IGHV3-49-201ENST00000390625 COBLO75128 1261 aa16.76■□□□□ 0.27
IGHV3-49-201ENST00000390625 CYBAP13498 195 aa16.76■□□□□ 0.27
IGHV3-49-201ENST00000390625 ITGB8P26012 769 aa16.76■□□□□ 0.27
IGHV3-49-201ENST00000390625 POLA2Q14181 598 aa16.76■□□□□ 0.27
IGHV3-49-201ENST00000390625 GRB14Q14449 540 aa16.76■□□□□ 0.27
IGHV3-49-201ENST00000390625 MFSD14CQ5VZR4 134 aa16.76■□□□□ 0.27
IGHV3-49-201ENST00000390625 CLEC10AQ8IUN9 316 aa16.76■□□□□ 0.27
IGHV3-49-201ENST00000390625 TMEM57Q8N5G2 664 aa16.76■□□□□ 0.27
IGHV3-49-201ENST00000390625 MYLIPQ8WY64 445 aa16.76■□□□□ 0.27
IGHV3-49-201ENST00000390625 FRAT1Q92837 279 aaPredicted RBP16.76■□□□□ 0.27
IGHV3-49-201ENST00000390625 RPAP3Q9H6T3 665 aaPredicted RBP16.76■□□□□ 0.27
IGHV3-49-201ENST00000390625 CWC22Q9HCG8 908 aaKnown RBP16.76■□□□□ 0.27
IGHV3-49-201ENST00000390625 HDAC5Q9UQL6 1122 aa16.76■□□□□ 0.27
IGHV3-49-201ENST00000390625 A0A0G2JMZ2 1700 aa16.76■□□□□ 0.27
IGHV3-49-201ENST00000390625 TRIM43BA6NCK2 446 aa16.75■□□□□ 0.27
IGHV3-49-201ENST00000390625 IDH1O75874 414 aaKnown RBP16.75■□□□□ 0.27
IGHV3-49-201ENST00000390625 MYCNP04198 464 aaPredicted RBP16.75■□□□□ 0.27
IGHV3-49-201ENST00000390625 PLCG2P16885 1265 aa16.75■□□□□ 0.27
IGHV3-49-201ENST00000390625 EPHB4P54760 987 aa16.75■□□□□ 0.27
IGHV3-49-201ENST00000390625 ATP2B2Q01814 1243 aa16.75■□□□□ 0.27
IGHV3-49-201ENST00000390625 SEPT2Q15019 361 aa16.75■□□□□ 0.27
IGHV3-49-201ENST00000390625 TRIM60Q495X7 471 aa16.75■□□□□ 0.27
IGHV3-49-201ENST00000390625 FAM109BQ6ICB4 259 aaPredicted RBP16.75■□□□□ 0.27
IGHV3-49-201ENST00000390625 MAGEB6Q8N7X4 407 aa16.75■□□□□ 0.27
IGHV3-49-201ENST00000390625 LPAR1Q92633 364 aa16.75■□□□□ 0.27
IGHV3-49-201ENST00000390625 BADQ92934 168 aa16.75■□□□□ 0.27
IGHV3-49-201ENST00000390625 FERMT2Q96AC1 680 aa16.75■□□□□ 0.27
IGHV3-49-201ENST00000390625 TRIM43Q96BQ3 446 aaPredicted RBP16.75■□□□□ 0.27
IGHV3-49-201ENST00000390625 EAF2Q96CJ1 260 aaPredicted RBP16.75■□□□□ 0.27
IGHV3-49-201ENST00000390625 LBHD1Q9BQE6 289 aaPredicted RBP16.75■□□□□ 0.27
IGHV3-49-201ENST00000390625 MOV10L1Q9BXT6 1211 aaKnown RBP16.75■□□□□ 0.27
IGHV3-49-201ENST00000390625 SEMA6BQ9H3T3 888 aa16.75■□□□□ 0.27
IGHV3-49-201ENST00000390625 TTC28Q96AY4 2481 aa16.75■□□□□ 0.27
IGHV3-49-201ENST00000390625 HLA-DOAP06340 250 aa16.74■□□□□ 0.27
IGHV3-49-201ENST00000390625 HOXC6P09630 235 aa16.74■□□□□ 0.27
IGHV3-49-201ENST00000390625 CYP2D6P10635 497 aa16.74■□□□□ 0.27
IGHV3-49-201ENST00000390625 SLC39A5Q6ZMH5 540 aa16.74■□□□□ 0.27
IGHV3-49-201ENST00000390625 SLC44A5Q8NCS7 719 aa16.74■□□□□ 0.27
IGHV3-49-201ENST00000390625 ARHGAP45Q92619 1136 aa16.74■□□□□ 0.27
IGHV3-49-201ENST00000390625 KIAA1683Q9H0B3 1180 aa16.74■□□□□ 0.27
IGHV3-49-201ENST00000390625 PRDM5Q9NQX1 630 aaPredicted RBP16.74■□□□□ 0.27
IGHV3-49-201ENST00000390625 ZNF236Q9UL36 1845 aa16.73■□□□□ 0.27
IGHV3-49-201ENST00000390625 DNM1LO00429 736 aa16.73■□□□□ 0.27
IGHV3-49-201ENST00000390625 SURF6O75683 361 aaKnown RBP16.73■□□□□ 0.27
IGHV3-49-201ENST00000390625 CT47B1P0C2W7 299 aaPredicted RBP16.73■□□□□ 0.27
IGHV3-49-201ENST00000390625 ADORA2AP29274 412 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms