RNA–Protein interactions for RNA: ENST00000390612.3

IGHV4-28-201, Transcript of immunoglobulin heavy variable 4-28, humanhuman

APPRIS P1 BASIC

Gene IGHV4-28, Length 425 nt, Biotype IG V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-28-201ENST00000390612 GNAT2P19087 354 aa13.67□□□□□ -0.22
IGHV4-28-201ENST00000390612 PRMT2P55345 433 aa13.67□□□□□ -0.22
IGHV4-28-201ENST00000390612 PABPC4Q13310 644 aaKnown RBP eCLIP13.67□□□□□ -0.22
IGHV4-28-201ENST00000390612 KIF22Q14807 665 aa13.67□□□□□ -0.22
IGHV4-28-201ENST00000390612 SEPT2Q15019 361 aa13.67□□□□□ -0.22
IGHV4-28-201ENST00000390612 B4GALNT3Q6L9W6 998 aa13.67□□□□□ -0.22
IGHV4-28-201ENST00000390612 USP17L2Q6R6M4 530 aa13.67□□□□□ -0.22
IGHV4-28-201ENST00000390612 ARMC5Q96C12 935 aa13.67□□□□□ -0.22
IGHV4-28-201ENST00000390612 CCDC17Q96LX7 622 aa13.67□□□□□ -0.22
IGHV4-28-201ENST00000390612 FSD1Q9BTV5 496 aa13.67□□□□□ -0.22
IGHV4-28-201ENST00000390612 CABP5Q9NP86 173 aa13.67□□□□□ -0.22
IGHV4-28-201ENST00000390612 ARPP21Q9UBL0 812 aaPredicted RBP13.67□□□□□ -0.22
IGHV4-28-201ENST00000390612 ROBO3Q96MS0 1386 aa13.67□□□□□ -0.22
IGHV4-28-201ENST00000390612 PLXNB2O15031 1838 aa13.67□□□□□ -0.22
IGHV4-28-201ENST00000390612 MYH4Q9Y623 1939 aa13.66□□□□□ -0.22
IGHV4-28-201ENST00000390612 A0A1W2PRG0 241 aa13.66□□□□□ -0.22
IGHV4-28-201ENST00000390612 PATL2C9JE40 543 aaKnown RBP13.66□□□□□ -0.22
IGHV4-28-201ENST00000390612 FOXP2O15409 715 aa13.66□□□□□ -0.22
IGHV4-28-201ENST00000390612 AKR1B1P15121 316 aa13.66□□□□□ -0.22
IGHV4-28-201ENST00000390612 PSMC4P43686 418 aa13.66□□□□□ -0.22
IGHV4-28-201ENST00000390612 GCLCP48506 637 aaPredicted RBP13.66□□□□□ -0.22
IGHV4-28-201ENST00000390612 RAB3GAP1Q15042 981 aa13.66□□□□□ -0.22
IGHV4-28-201ENST00000390612 FAM110CQ1W6H9 321 aa13.66□□□□□ -0.22
IGHV4-28-201ENST00000390612 POTEEQ6S8J3 1075 aa13.66□□□□□ -0.22
IGHV4-28-201ENST00000390612 TMEM179Q6ZVK1 233 aa13.66□□□□□ -0.22
IGHV4-28-201ENST00000390612 DDRGK1Q96HY6 314 aa13.66□□□□□ -0.22
IGHV4-28-201ENST00000390612 TMOD4Q9NZQ9 345 aa13.66□□□□□ -0.22
IGHV4-28-201ENST00000390612 MORF4L1Q9UBU8 362 aa13.66□□□□□ -0.22
IGHV4-28-201ENST00000390612 SRRDQ9UH36 339 aa13.66□□□□□ -0.22
IGHV4-28-201ENST00000390612 PTCH2Q9Y6C5 1203 aa13.66□□□□□ -0.22
IGHV4-28-201ENST00000390612 OSBPP22059 807 aa13.65□□□□□ -0.22
IGHV4-28-201ENST00000390612 IFNL3Q8IZI9 196 aa13.65□□□□□ -0.22
IGHV4-28-201ENST00000390612 SMCR8Q8TEV9 937 aaPredicted RBP13.65□□□□□ -0.22
IGHV4-28-201ENST00000390612 P2RX7Q99572 595 aaKnown RBP13.65□□□□□ -0.22
IGHV4-28-201ENST00000390612 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.65□□□□□ -0.22
IGHV4-28-201ENST00000390612 USP14P54578 494 aa13.64□□□□□ -0.23
IGHV4-28-201ENST00000390612 HERVK_113P62684 666 aa13.64□□□□□ -0.23
IGHV4-28-201ENST00000390612 IRX6P78412 446 aaPredicted RBP13.64□□□□□ -0.23
IGHV4-28-201ENST00000390612 AMOTL1Q8IY63 956 aa13.64□□□□□ -0.23
IGHV4-28-201ENST00000390612 ANKRD13CQ8N6S4 541 aa13.64□□□□□ -0.23
IGHV4-28-201ENST00000390612 ZNFX1Q9P2E3 1918 aaKnown RBP13.63□□□□□ -0.23
IGHV4-28-201ENST00000390612 USP17L15C9J2P7 530 aa13.63□□□□□ -0.23
IGHV4-28-201ENST00000390612 USP17L13C9JLJ4 530 aa13.63□□□□□ -0.23
IGHV4-28-201ENST00000390612 USP17L11C9JVI0 530 aa13.63□□□□□ -0.23
IGHV4-28-201ENST00000390612 USP17L18D6R9N7 530 aa13.63□□□□□ -0.23
IGHV4-28-201ENST00000390612 USP17L22D6RA61 530 aa13.63□□□□□ -0.23
IGHV4-28-201ENST00000390612 USP17L17D6RBQ6 530 aa13.63□□□□□ -0.23
IGHV4-28-201ENST00000390612 USP17L19D6RCP7 530 aa13.63□□□□□ -0.23
IGHV4-28-201ENST00000390612 USP17L20D6RJB6 530 aa13.63□□□□□ -0.23
IGHV4-28-201ENST00000390612 FMNL1O95466 1100 aaPredicted RBP13.63□□□□□ -0.23
IGHV4-28-201ENST00000390612 RASA1P20936 1047 aa13.63□□□□□ -0.23
IGHV4-28-201ENST00000390612 HOXD10P28358 340 aa13.63□□□□□ -0.23
IGHV4-28-201ENST00000390612 FCGRTP55899 365 aa13.63□□□□□ -0.23
IGHV4-28-201ENST00000390612 USP17L24Q0WX57 530 aa13.63□□□□□ -0.23
IGHV4-28-201ENST00000390612 LBX2Q6XYB7 198 aa13.63□□□□□ -0.23
IGHV4-28-201ENST00000390612 CATSPERGQ6ZRH7 1159 aa13.63□□□□□ -0.23
IGHV4-28-201ENST00000390612 ZNF333Q96JL9 665 aa13.63□□□□□ -0.23
IGHV4-28-201ENST00000390612 HELLSQ9NRZ9 838 aa13.63□□□□□ -0.23
IGHV4-28-201ENST00000390612 RBPJLQ9UBG7 517 aa13.63□□□□□ -0.23
IGHV4-28-201ENST00000390612 TMX2Q9Y320 296 aa13.63□□□□□ -0.23
IGHV4-28-201ENST00000390612 MPHOSPH10O00566 681 aaKnown RBP13.62□□□□□ -0.23
IGHV4-28-201ENST00000390612 VCAM1P19320 739 aa13.62□□□□□ -0.23
IGHV4-28-201ENST00000390612 PDE4AP27815 886 aa13.62□□□□□ -0.23
IGHV4-28-201ENST00000390612 SOX10P56693 466 aa13.62□□□□□ -0.23
IGHV4-28-201ENST00000390612 IRX3P78415 501 aaPredicted RBP13.62□□□□□ -0.23
IGHV4-28-201ENST00000390612 ALX1Q15699 326 aa13.62□□□□□ -0.23
IGHV4-28-201ENST00000390612 KIAA1755Q5JYT7 1200 aa13.62□□□□□ -0.23
IGHV4-28-201ENST00000390612 FEZ1Q99689 392 aa13.62□□□□□ -0.23
IGHV4-28-201ENST00000390612 TXNRD2Q9NNW7 524 aa13.62□□□□□ -0.23
IGHV4-28-201ENST00000390612 GABRQQ9UN88 632 aa13.62□□□□□ -0.23
IGHV4-28-201ENST00000390612 COL11A1P12107 1806 aaPredicted RBP13.62□□□□□ -0.23
IGHV4-28-201ENST00000390612 IGKV6D-41A0A0C4DH26 115 aa13.61□□□□□ -0.23
IGHV4-28-201ENST00000390612 A0A0D9SFI3 127 aa13.61□□□□□ -0.23
IGHV4-28-201ENST00000390612 MINDY4BA8MYZ0 360 aa13.61□□□□□ -0.23
IGHV4-28-201ENST00000390612 TDO2P48775 406 aa13.61□□□□□ -0.23
IGHV4-28-201ENST00000390612 PRKCZQ05513 592 aa13.61□□□□□ -0.23
IGHV4-28-201ENST00000390612 IRF5Q13568 498 aa13.61□□□□□ -0.23
IGHV4-28-201ENST00000390612 ZYXQ15942 572 aaKnown RBP13.61□□□□□ -0.23
IGHV4-28-201ENST00000390612 CCDC129Q6ZRS4 1044 aa13.61□□□□□ -0.23
IGHV4-28-201ENST00000390612 CLEC10AQ8IUN9 316 aa13.61□□□□□ -0.23
IGHV4-28-201ENST00000390612 GTF3C2Q8WUA4 911 aaPredicted RBP13.61□□□□□ -0.23
IGHV4-28-201ENST00000390612 FAM227BQ96M60 508 aa13.61□□□□□ -0.23
IGHV4-28-201ENST00000390612 NACAP1Q9BZK3 213 aa13.61□□□□□ -0.23
IGHV4-28-201ENST00000390612 KANSL2Q9H9L4 492 aa13.61□□□□□ -0.23
IGHV4-28-201ENST00000390612 GJD2Q9UKL4 321 aa13.61□□□□□ -0.23
IGHV4-28-201ENST00000390612 A0A0G2JMZ2 1700 aa13.61□□□□□ -0.23
IGHV4-28-201ENST00000390612 MYPNQ86TC9 1320 aa13.61□□□□□ -0.23
IGHV4-28-201ENST00000390612 PEX10O60683 326 aa13.6□□□□□ -0.23
IGHV4-28-201ENST00000390612 CNMDO75829 334 aa13.6□□□□□ -0.23
IGHV4-28-201ENST00000390612 APPP05067 770 aa13.6□□□□□ -0.23
IGHV4-28-201ENST00000390612 EEF2P13639 858 aaKnown RBP13.6□□□□□ -0.23
IGHV4-28-201ENST00000390612 ICA1Q05084 483 aa13.6□□□□□ -0.23
IGHV4-28-201ENST00000390612 Q3C1V9 767 aa13.6□□□□□ -0.23
IGHV4-28-201ENST00000390612 SLC9C1Q4G0N8 1177 aa13.6□□□□□ -0.23
IGHV4-28-201ENST00000390612 MCMDC2Q4G0Z9 681 aa13.6□□□□□ -0.23
IGHV4-28-201ENST00000390612 VPS53Q5VIR6 699 aa13.6□□□□□ -0.23
IGHV4-28-201ENST00000390612 NBPF11Q86T75 865 aa13.6□□□□□ -0.23
IGHV4-28-201ENST00000390612 LPAR1Q92633 364 aa13.6□□□□□ -0.23
IGHV4-28-201ENST00000390612 RPAP3Q9H6T3 665 aaPredicted RBP13.6□□□□□ -0.23
IGHV4-28-201ENST00000390612 VCPKMTQ9H867 229 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms