RNA–Protein interactions for RNA: ENST00000390426.2

TRAV4-201, Transcript of T cell receptor alpha variable 4, humanhuman

APPRIS P1 BASIC

Gene TRAV4, Length 395 nt, Biotype TR V gene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV4-201ENST00000390426 MCM9Q9NXL9 1143 aa12.97□□□□□ -0.33
TRAV4-201ENST00000390426 MYH1P12882 1939 aa12.97□□□□□ -0.33
TRAV4-201ENST00000390426 TCRBV5S4A2TA0A5A2 114 aa12.96□□□□□ -0.33
TRAV4-201ENST00000390426 USP17L15C9J2P7 530 aa12.96□□□□□ -0.33
TRAV4-201ENST00000390426 USP17L13C9JLJ4 530 aa12.96□□□□□ -0.33
TRAV4-201ENST00000390426 USP17L11C9JVI0 530 aa12.96□□□□□ -0.33
TRAV4-201ENST00000390426 USP17L18D6R9N7 530 aa12.96□□□□□ -0.33
TRAV4-201ENST00000390426 USP17L22D6RA61 530 aa12.96□□□□□ -0.33
TRAV4-201ENST00000390426 USP17L17D6RBQ6 530 aa12.96□□□□□ -0.33
TRAV4-201ENST00000390426 USP17L19D6RCP7 530 aa12.96□□□□□ -0.33
TRAV4-201ENST00000390426 USP17L20D6RJB6 530 aa12.96□□□□□ -0.33
TRAV4-201ENST00000390426 CYP2D6P10635 497 aa12.96□□□□□ -0.33
TRAV4-201ENST00000390426 GUCY1A2P33402 732 aa12.96□□□□□ -0.33
TRAV4-201ENST00000390426 FXR1P51114 621 aaKnown RBP eCLIP12.96□□□□□ -0.33
TRAV4-201ENST00000390426 ERVK-9P63128 1117 aa12.96□□□□□ -0.33
TRAV4-201ENST00000390426 ERVK-24P63145 666 aa12.96□□□□□ -0.33
TRAV4-201ENST00000390426 GABPAQ06546 454 aa12.96□□□□□ -0.33
TRAV4-201ENST00000390426 USP17L24Q0WX57 530 aa12.96□□□□□ -0.33
TRAV4-201ENST00000390426 LCORLQ8N3X6 602 aa12.96□□□□□ -0.33
TRAV4-201ENST00000390426 GTF3C2Q8WUA4 911 aaPredicted RBP12.96□□□□□ -0.33
TRAV4-201ENST00000390426 C12orf42Q96LP6 360 aa12.96□□□□□ -0.33
TRAV4-201ENST00000390426 NUDT12Q9BQG2 462 aa12.96□□□□□ -0.33
TRAV4-201ENST00000390426 KIAA1683Q9H0B3 1180 aa12.96□□□□□ -0.33
TRAV4-201ENST00000390426 CHMP4BQ9H444 224 aaKnown RBP12.96□□□□□ -0.33
TRAV4-201ENST00000390426 ARMT1Q9H993 441 aa12.96□□□□□ -0.33
TRAV4-201ENST00000390426 HMX1Q9NP08 348 aaPredicted RBP12.96□□□□□ -0.33
TRAV4-201ENST00000390426 PAG1Q9NWQ8 432 aa12.96□□□□□ -0.33
TRAV4-201ENST00000390426 RPTORQ8N122 1335 aa12.95□□□□□ -0.34
TRAV4-201ENST00000390426 MPHOSPH10O00566 681 aaKnown RBP12.95□□□□□ -0.34
TRAV4-201ENST00000390426 PRKAB2O43741 272 aa12.95□□□□□ -0.34
TRAV4-201ENST00000390426 ATP5JP18859 108 aa12.95□□□□□ -0.34
TRAV4-201ENST00000390426 MAPK4P31152 587 aa12.95□□□□□ -0.34
TRAV4-201ENST00000390426 USP14P54578 494 aa12.95□□□□□ -0.34
TRAV4-201ENST00000390426 PDE3AQ14432 1141 aa12.95□□□□□ -0.34
TRAV4-201ENST00000390426 SEPT2Q15019 361 aa12.95□□□□□ -0.34
TRAV4-201ENST00000390426 CATSPERGQ6ZRH7 1159 aa12.95□□□□□ -0.34
TRAV4-201ENST00000390426 GPR142Q7Z601 462 aa12.95□□□□□ -0.34
TRAV4-201ENST00000390426 PLEKHH3Q7Z736 793 aa12.95□□□□□ -0.34
TRAV4-201ENST00000390426 DIS3LQ8TF46 1054 aaKnown RBP12.95□□□□□ -0.34
TRAV4-201ENST00000390426 PAWRQ96IZ0 340 aaKnown RBP12.95□□□□□ -0.34
TRAV4-201ENST00000390426 DCP1AQ9NPI6 582 aaPredicted RBP12.95□□□□□ -0.34
TRAV4-201ENST00000390426 RABGAP1Q9Y3P9 1069 aa12.95□□□□□ -0.34
TRAV4-201ENST00000390426 NR2E3Q9Y5X4 410 aa12.95□□□□□ -0.34
TRAV4-201ENST00000390426 SMARCA5O60264 1052 aaPredicted RBP12.94□□□□□ -0.34
TRAV4-201ENST00000390426 EVI5O60447 810 aa12.94□□□□□ -0.34
TRAV4-201ENST00000390426 CNMDO75829 334 aa12.94□□□□□ -0.34
TRAV4-201ENST00000390426 MBD4O95243 580 aa12.94□□□□□ -0.34
TRAV4-201ENST00000390426 CHGBP05060 677 aa12.94□□□□□ -0.34
TRAV4-201ENST00000390426 CAPN2P17655 700 aa12.94□□□□□ -0.34
TRAV4-201ENST00000390426 VCAM1P19320 739 aa12.94□□□□□ -0.34
TRAV4-201ENST00000390426 CCL14Q16627 93 aa12.94□□□□□ -0.34
TRAV4-201ENST00000390426 SLC44A5Q8NCS7 719 aa12.94□□□□□ -0.34
TRAV4-201ENST00000390426 SOCS4Q8WXH5 440 aa12.94□□□□□ -0.34
TRAV4-201ENST00000390426 DYNLL2Q96FJ2 89 aa12.94□□□□□ -0.34
TRAV4-201ENST00000390426 RPAP3Q9H6T3 665 aaPredicted RBP12.94□□□□□ -0.34
TRAV4-201ENST00000390426 CWC22Q9HCG8 908 aaKnown RBP12.94□□□□□ -0.34
TRAV4-201ENST00000390426 MKI67P46013 3256 aaKnown RBP12.94□□□□□ -0.34
TRAV4-201ENST00000390426 A0A1W2PRG0 241 aa12.93□□□□□ -0.34
TRAV4-201ENST00000390426 XRCC5P13010 732 aaKnown RBP12.93□□□□□ -0.34
TRAV4-201ENST00000390426 PRKAR2AP13861 404 aaKnown RBP12.93□□□□□ -0.34
TRAV4-201ENST00000390426 ZKSCAN1P17029 563 aaPredicted RBP12.93□□□□□ -0.34
TRAV4-201ENST00000390426 ADD2P35612 726 aa12.93□□□□□ -0.34
TRAV4-201ENST00000390426 RGS2P41220 211 aa12.93□□□□□ -0.34
TRAV4-201ENST00000390426 MORN1Q5T089 497 aa12.93□□□□□ -0.34
TRAV4-201ENST00000390426 WDR78Q5VTH9 848 aa12.93□□□□□ -0.34
TRAV4-201ENST00000390426 NECAB2Q7Z6G3 386 aa12.93□□□□□ -0.34
TRAV4-201ENST00000390426 USP6NLQ92738 828 aa12.93□□□□□ -0.34
TRAV4-201ENST00000390426 HAUS7Q99871 368 aa12.93□□□□□ -0.34
TRAV4-201ENST00000390426 BTBD7Q9P203 1132 aa12.93□□□□□ -0.34
TRAV4-201ENST00000390426 RBM27Q9P2N5 1060 aaKnown RBP12.93□□□□□ -0.34
TRAV4-201ENST00000390426 PLXNB2O15031 1838 aa12.92□□□□□ -0.34
TRAV4-201ENST00000390426 TRIOBPQ9H2D6 2365 aa12.92□□□□□ -0.34
TRAV4-201ENST00000390426 CCNA1P78396 465 aa12.92□□□□□ -0.34
TRAV4-201ENST00000390426 CACNB2Q08289 660 aaPredicted RBP12.92□□□□□ -0.34
TRAV4-201ENST00000390426 MAP3K21Q5TCX8 1036 aa12.92□□□□□ -0.34
TRAV4-201ENST00000390426 TRMT44Q8IYL2 757 aaKnown RBP12.92□□□□□ -0.34
TRAV4-201ENST00000390426 LRRCC1Q9C099 1032 aa12.92□□□□□ -0.34
TRAV4-201ENST00000390426 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.92□□□□□ -0.34
TRAV4-201ENST00000390426 BRCA2P51587 3418 aa12.91□□□□□ -0.34
TRAV4-201ENST00000390426 CYP2D7A0A087X1C5 515 aa12.91□□□□□ -0.34
TRAV4-201ENST00000390426 SPDYE16A6NNV3 312 aaPredicted RBP12.91□□□□□ -0.34
TRAV4-201ENST00000390426 SMIM22K7EJ46 135 aa12.91□□□□□ -0.34
TRAV4-201ENST00000390426 GLRX3O76003 335 aaKnown RBP12.91□□□□□ -0.34
TRAV4-201ENST00000390426 AKR1B1P15121 316 aa12.91□□□□□ -0.34
TRAV4-201ENST00000390426 CCND3P30281 292 aaPredicted RBP12.91□□□□□ -0.34
TRAV4-201ENST00000390426 MAP2K5Q13163 448 aa12.91□□□□□ -0.34
TRAV4-201ENST00000390426 ANKLE1Q8NAG6 615 aa12.91□□□□□ -0.34
TRAV4-201ENST00000390426 APBA2Q99767 749 aa12.91□□□□□ -0.34
TRAV4-201ENST00000390426 ATP8A2Q9NTI2 1148 aa12.91□□□□□ -0.34
TRAV4-201ENST00000390426 SWAP70Q9UH65 585 aa12.91□□□□□ -0.34
TRAV4-201ENST00000390426 USP17L12C9JPN9 530 aa12.9□□□□□ -0.34
TRAV4-201ENST00000390426 USP17L21D6R901 530 aa12.9□□□□□ -0.34
TRAV4-201ENST00000390426 PTPREP23469 700 aa12.9□□□□□ -0.34
TRAV4-201ENST00000390426 MNX1P50219 401 aaPredicted RBP12.9□□□□□ -0.34
TRAV4-201ENST00000390426 UBE3CQ15386 1083 aa12.9□□□□□ -0.34
TRAV4-201ENST00000390426 KIAA1755Q5JYT7 1200 aa12.9□□□□□ -0.34
TRAV4-201ENST00000390426 LBX2Q6XYB7 198 aa12.9□□□□□ -0.34
TRAV4-201ENST00000390426 TMEM179Q6ZVK1 233 aa12.9□□□□□ -0.34
TRAV4-201ENST00000390426 CLEC10AQ8IUN9 316 aa12.9□□□□□ -0.34
TRAV4-201ENST00000390426 TANGO6Q9C0B7 1094 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms