RNA–Protein interactions for RNA: ENST00000389195.6

LTN1-203, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 1 (best) BASIC

Gene LTN1, Length 2,714 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-203ENST00000389195 TRIM44Q96DX7 344 aaPredicted RBP11.74□□□□□ -0.53
LTN1-203ENST00000389195 TMEM47Q9BQJ4 181 aa11.74□□□□□ -0.53
LTN1-203ENST00000389195 TMX4Q9H1E5 349 aaPredicted RBP11.74□□□□□ -0.53
LTN1-203ENST00000389195 KAT14Q9H8E8 782 aa11.74□□□□□ -0.53
LTN1-203ENST00000389195 RTEL1Q9NZ71 1219 aa11.74□□□□□ -0.53
LTN1-203ENST00000389195 SHTN1A0MZ66 631 aa11.73□□□□□ -0.53
LTN1-203ENST00000389195 YDJCA8MPS7 323 aa11.73□□□□□ -0.53
LTN1-203ENST00000389195 MPHOSPH10O00566 681 aaKnown RBP11.73□□□□□ -0.53
LTN1-203ENST00000389195 AKR1B1P15121 316 aa11.73□□□□□ -0.53
LTN1-203ENST00000389195 GSTO1P78417 241 aa11.73□□□□□ -0.53
LTN1-203ENST00000389195 PTPN21Q16825 1174 aa11.73□□□□□ -0.53
LTN1-203ENST00000389195 AXDND1Q5T1B0 1012 aaPredicted RBP11.73□□□□□ -0.53
LTN1-203ENST00000389195 C11orf57Q6ZUT1 292 aaPredicted RBP11.73□□□□□ -0.53
LTN1-203ENST00000389195 ZSCAN29Q8IWY8 852 aaPredicted RBP11.73□□□□□ -0.53
LTN1-203ENST00000389195 CDAN1Q8IWY9 1227 aa11.73□□□□□ -0.53
LTN1-203ENST00000389195 GRAMD1CQ8IYS0 662 aa11.73□□□□□ -0.53
LTN1-203ENST00000389195 MAP3K14Q99558 947 aa11.73□□□□□ -0.53
LTN1-203ENST00000389195 SDF4Q9BRK5 362 aa11.73□□□□□ -0.53
LTN1-203ENST00000389195 COA1Q9GZY4 146 aa11.73□□□□□ -0.53
LTN1-203ENST00000389195 SCN9AQ15858 1988 aa11.73□□□□□ -0.53
LTN1-203ENST00000389195 LDHCP07864 332 aa11.73□□□□□ -0.53
LTN1-203ENST00000389195 DPEP1P16444 411 aa11.73□□□□□ -0.53
LTN1-203ENST00000389195 CASP1P29466 404 aa11.73□□□□□ -0.53
LTN1-203ENST00000389195 PPP4CP60510 307 aa11.73□□□□□ -0.53
LTN1-203ENST00000389195 ZNF174Q15697 407 aa11.73□□□□□ -0.53
LTN1-203ENST00000389195 SHC4Q6S5L8 630 aa11.73□□□□□ -0.53
LTN1-203ENST00000389195 NOSTRINQ8IVI9 506 aa11.73□□□□□ -0.53
LTN1-203ENST00000389195 TDRD3Q9H7E2 651 aaKnown RBP11.73□□□□□ -0.53
LTN1-203ENST00000389195 CLRN2A0PK11 232 aa11.73□□□□□ -0.53
LTN1-203ENST00000389195 ORC4O43929 436 aa11.73□□□□□ -0.53
LTN1-203ENST00000389195 DEXIO95424 95 aa11.73□□□□□ -0.53
LTN1-203ENST00000389195 SLC3A2P08195 630 aaKnown RBP11.73□□□□□ -0.53
LTN1-203ENST00000389195 TAL1P17542 331 aaPredicted RBP11.73□□□□□ -0.53
LTN1-203ENST00000389195 SBK1Q52WX2 424 aa11.73□□□□□ -0.53
LTN1-203ENST00000389195 C15orf52Q6ZUT6 534 aaKnown RBP11.73□□□□□ -0.53
LTN1-203ENST00000389195 TMTC3Q6ZXV5 915 aa11.73□□□□□ -0.53
LTN1-203ENST00000389195 TMTC2Q8N394 836 aa11.73□□□□□ -0.53
LTN1-203ENST00000389195 ENGASEQ8NFI3 743 aa11.73□□□□□ -0.53
LTN1-203ENST00000389195 CTCFLQ8NI51 663 aaPredicted RBP11.73□□□□□ -0.53
LTN1-203ENST00000389195 CLSTN2Q9H4D0 955 aa11.73□□□□□ -0.53
LTN1-203ENST00000389195 PDS5AQ29RF7 1337 aaKnown RBP11.72□□□□□ -0.53
LTN1-203ENST00000389195 DDTLA6NHG4 134 aaPredicted RBP11.72□□□□□ -0.53
LTN1-203ENST00000389195 USP17L5A8MUK1 530 aa11.72□□□□□ -0.53
LTN1-203ENST00000389195 PPIP5K2O43314 1243 aa11.72□□□□□ -0.53
LTN1-203ENST00000389195 PFKFB1P16118 471 aa11.72□□□□□ -0.53
LTN1-203ENST00000389195 CRKP46108 304 aa11.72□□□□□ -0.53
LTN1-203ENST00000389195 PTPAQ15257 358 aa11.72□□□□□ -0.53
LTN1-203ENST00000389195 HSP90AA4PQ58FG1 418 aa11.72□□□□□ -0.53
LTN1-203ENST00000389195 CCDC73Q6ZRK6 1079 aa11.72□□□□□ -0.53
LTN1-203ENST00000389195 C17orf53Q8N3J3 647 aaPredicted RBP11.72□□□□□ -0.53
LTN1-203ENST00000389195 ANP32BQ92688 251 aaKnown RBP11.72□□□□□ -0.53
LTN1-203ENST00000389195 STAMQ92783 540 aa11.72□□□□□ -0.53
LTN1-203ENST00000389195 ECM29Q5VYK3 1845 aa11.72□□□□□ -0.53
LTN1-203ENST00000389195 PSDA5PKW4 1024 aaPredicted RBP11.72□□□□□ -0.53
LTN1-203ENST00000389195 ADCY5O95622 1261 aa11.72□□□□□ -0.53
LTN1-203ENST00000389195 U2AF2P26368 475 aaKnown RBP eCLIP11.72□□□□□ -0.538e-6■■■□□ 17.5
LTN1-203ENST00000389195 PIK3AP1Q6ZUJ8 805 aa11.72□□□□□ -0.53
LTN1-203ENST00000389195 KINO60870 393 aaKnown RBP11.71□□□□□ -0.53
LTN1-203ENST00000389195 SLC16A2P36021 539 aa11.71□□□□□ -0.53
LTN1-203ENST00000389195 SNAP25P60880 206 aa11.71□□□□□ -0.53
LTN1-203ENST00000389195 SF3B2Q13435 895 aaKnown RBP11.71□□□□□ -0.53
LTN1-203ENST00000389195 NPY5RQ15761 445 aa11.71□□□□□ -0.53
LTN1-203ENST00000389195 ADALQ6DHV7 355 aa11.71□□□□□ -0.53
LTN1-203ENST00000389195 HEATR3Q7Z4Q2 680 aa11.71□□□□□ -0.53
LTN1-203ENST00000389195 FMR1NBQ8N0W7 255 aaPredicted RBP11.71□□□□□ -0.53
LTN1-203ENST00000389195 MRPS27Q92552 414 aaKnown RBP11.71□□□□□ -0.53
LTN1-203ENST00000389195 PRMT6Q96LA8 375 aaPredicted RBP11.71□□□□□ -0.53
LTN1-203ENST00000389195 CBX8Q9HC52 389 aa11.71□□□□□ -0.53
LTN1-203ENST00000389195 MAD2L2Q9UI95 211 aa11.71□□□□□ -0.53
LTN1-203ENST00000389195 CNTNAP5Q8WYK1 1306 aa11.71□□□□□ -0.53
LTN1-203ENST00000389195 TIAM2Q8IVF5 1701 aa11.71□□□□□ -0.53
LTN1-203ENST00000389195 ZNF202O95125 648 aa11.71□□□□□ -0.54
LTN1-203ENST00000389195 CCDC192P0DO97 292 aa11.71□□□□□ -0.54
LTN1-203ENST00000389195 SLC39A14Q15043 492 aa11.71□□□□□ -0.54
LTN1-203ENST00000389195 SAMD1Q6SPF0 538 aaPredicted RBP11.71□□□□□ -0.54
LTN1-203ENST00000389195 FLAD1Q8NFF5 587 aa11.71□□□□□ -0.54
LTN1-203ENST00000389195 GPCPD1Q9NPB8 672 aa11.71□□□□□ -0.54
LTN1-203ENST00000389195 POLR3EQ9NVU0 708 aa11.71□□□□□ -0.54
LTN1-203ENST00000389195 CLIP2Q9UDT6 1046 aa11.71□□□□□ -0.54
LTN1-203ENST00000389195 FAM205AQ6ZU69 1335 aa11.71□□□□□ -0.54
LTN1-203ENST00000389195 CCDC196A0A1B0GTZ2 297 aa11.7□□□□□ -0.54
LTN1-203ENST00000389195 GDF11O95390 407 aa11.7□□□□□ -0.54
LTN1-203ENST00000389195 FAM160A1Q05DH4 1040 aa11.7□□□□□ -0.54
LTN1-203ENST00000389195 PNOCQ13519 176 aa11.7□□□□□ -0.54
LTN1-203ENST00000389195 LONRF3Q496Y0 759 aa11.7□□□□□ -0.54
LTN1-203ENST00000389195 TTBK2Q6IQ55 1244 aa11.7□□□□□ -0.54
LTN1-203ENST00000389195 BRAPQ7Z569 592 aa11.7□□□□□ -0.54
LTN1-203ENST00000389195 AMOTL1Q8IY63 956 aa11.7□□□□□ -0.54
LTN1-203ENST00000389195 C7orf43Q8WVR3 580 aa11.7□□□□□ -0.54
LTN1-203ENST00000389195 EPSTI1Q96J88 318 aa11.7□□□□□ -0.54
LTN1-203ENST00000389195 KCNA3P22001 575 aa11.7□□□□□ -0.54
LTN1-203ENST00000389195 NLRP5P59047 1200 aa11.7□□□□□ -0.54
LTN1-203ENST00000389195 JAG1P78504 1218 aa11.7□□□□□ -0.54
LTN1-203ENST00000389195 SAFBQ15424 915 aaKnown RBP eCLIP11.7□□□□□ -0.54
LTN1-203ENST00000389195 DACT2Q5SW24 774 aa11.7□□□□□ -0.54
LTN1-203ENST00000389195 SASS6Q6UVJ0 657 aa11.7□□□□□ -0.54
LTN1-203ENST00000389195 TBC1D22AQ8WUA7 517 aa11.7□□□□□ -0.54
LTN1-203ENST00000389195 TEKT1Q969V4 418 aa11.7□□□□□ -0.54
LTN1-203ENST00000389195 DNAJC18Q9H819 358 aa11.7□□□□□ -0.54
LTN1-203ENST00000389195 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms