RNA–Protein interactions for RNA: ENST00000381870.7

CTNS-202, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 1 (best) BASIC

Gene CTNS, Length 2,470 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-202ENST00000381870 PDE2AO00408 941 aaPredicted RBP16.88■□□□□ 0.29
CTNS-202ENST00000381870 NDUFAB1O14561 156 aa16.88■□□□□ 0.29
CTNS-202ENST00000381870 RANBP6O60518 1105 aaKnown RBP16.88■□□□□ 0.29
CTNS-202ENST00000381870 AFMP43652 599 aa16.88■□□□□ 0.29
CTNS-202ENST00000381870 DDR1Q08345 913 aa16.88■□□□□ 0.29
CTNS-202ENST00000381870 C2orf54Q08AI8 447 aa16.88■□□□□ 0.29
CTNS-202ENST00000381870 PDCLQ13371 301 aa16.88■□□□□ 0.29
CTNS-202ENST00000381870 TRIM29Q14134 588 aa16.88■□□□□ 0.29
CTNS-202ENST00000381870 SND1Q7KZF4 910 aaKnown RBP eCLIP16.88■□□□□ 0.29
CTNS-202ENST00000381870 RPAINQ86UA6 219 aa16.88■□□□□ 0.29
CTNS-202ENST00000381870 MICU3Q86XE3 530 aa16.88■□□□□ 0.29
CTNS-202ENST00000381870 GIMAP7Q8NHV1 300 aa16.88■□□□□ 0.29
CTNS-202ENST00000381870 AENQ8WTP8 325 aaKnown RBP16.88■□□□□ 0.29
CTNS-202ENST00000381870 CPDO75976 1380 aa16.88■□□□□ 0.29
CTNS-202ENST00000381870 KDM6AO15550 1401 aaPredicted RBP16.88■□□□□ 0.29
CTNS-202ENST00000381870 ITIH6Q6UXX5 1313 aa16.88■□□□□ 0.29
CTNS-202ENST00000381870 CCDC189A1A4V9 331 aa16.88■□□□□ 0.29
CTNS-202ENST00000381870 BTBD18B2RXH4 712 aa16.88■□□□□ 0.29
CTNS-202ENST00000381870 NDUFA10O95299 355 aa16.88■□□□□ 0.29
CTNS-202ENST00000381870 KRT9P35527 623 aa16.88■□□□□ 0.29
CTNS-202ENST00000381870 PIP4K2AP48426 406 aaPredicted RBP16.88■□□□□ 0.29
CTNS-202ENST00000381870 VPS16Q9H269 839 aa16.88■□□□□ 0.29
CTNS-202ENST00000381870 EPN1Q9Y6I3 576 aaPredicted RBP16.88■□□□□ 0.29
CTNS-202ENST00000381870 OVOS2A0A0G2JMS6 1433 aa16.87■□□□□ 0.29
CTNS-202ENST00000381870 SETD1BQ9UPS6 1966 aaKnown RBP16.87■□□□□ 0.29
CTNS-202ENST00000381870 MAP3K15Q6ZN16 1313 aa16.87■□□□□ 0.29
CTNS-202ENST00000381870 FSBPO95073 299 aa16.87■□□□□ 0.29
CTNS-202ENST00000381870 FKBP4Q02790 459 aaKnown RBP eCLIP16.87■□□□□ 0.29
CTNS-202ENST00000381870 PAPD7Q5XG87 772 aaKnown RBP16.87■□□□□ 0.29
CTNS-202ENST00000381870 C14orf37Q86TY3 774 aa16.87■□□□□ 0.29
CTNS-202ENST00000381870 NOSTRINQ8IVI9 506 aa16.87■□□□□ 0.29
CTNS-202ENST00000381870 CAGE1Q8TC20 777 aa16.87■□□□□ 0.29
CTNS-202ENST00000381870 JAKMIP2Q96AA8 810 aa16.87■□□□□ 0.29
CTNS-202ENST00000381870 ARL8AQ96BM9 186 aa16.87■□□□□ 0.29
CTNS-202ENST00000381870 MYL10Q9BUA6 226 aa16.87■□□□□ 0.29
CTNS-202ENST00000381870 POLD4Q9HCU8 107 aa16.87■□□□□ 0.29
CTNS-202ENST00000381870 UBN2Q6ZU65 1347 aa16.87■□□□□ 0.29
CTNS-202ENST00000381870 ATP5J2-PTCD1G3V325 749 aa16.87■□□□□ 0.29
CTNS-202ENST00000381870 N4BP3O15049 544 aa16.87■□□□□ 0.29
CTNS-202ENST00000381870 PTCD1O75127 700 aaKnown RBP16.87■□□□□ 0.29
CTNS-202ENST00000381870 CDKL5O76039 1030 aa16.87■□□□□ 0.29
CTNS-202ENST00000381870 KIAA0754O94854 1291 aa16.87■□□□□ 0.29
CTNS-202ENST00000381870 DPYDQ12882 1025 aa16.87■□□□□ 0.29
CTNS-202ENST00000381870 KRT31Q15323 416 aa16.87■□□□□ 0.29
CTNS-202ENST00000381870 TTMPQ5BVD1 217 aa16.87■□□□□ 0.29
CTNS-202ENST00000381870 LMBR1LQ6UX01 489 aa16.87■□□□□ 0.29
CTNS-202ENST00000381870 CYB5R4Q7L1T6 521 aa16.87■□□□□ 0.29
CTNS-202ENST00000381870 ATG9AQ7Z3C6 839 aa16.87■□□□□ 0.29
CTNS-202ENST00000381870 FAM184BQ9ULE4 1060 aa16.87■□□□□ 0.29
CTNS-202ENST00000381870 DIP2AQ14689 1571 aa16.86■□□□□ 0.29
CTNS-202ENST00000381870 PXDNQ92626 1479 aa16.86■□□□□ 0.29
CTNS-202ENST00000381870 ZNF213O14771 459 aa16.86■□□□□ 0.29
CTNS-202ENST00000381870 MEFVO15553 781 aaPredicted RBP16.86■□□□□ 0.29
CTNS-202ENST00000381870 IBSPP21815 317 aaPredicted RBP16.86■□□□□ 0.29
CTNS-202ENST00000381870 IARSP41252 1262 aaKnown RBP16.86■□□□□ 0.29
CTNS-202ENST00000381870 MRPS25P82663 173 aaKnown RBP16.86■□□□□ 0.29
CTNS-202ENST00000381870 EZH2Q15910 746 aaKnown RBP16.86■□□□□ 0.29
CTNS-202ENST00000381870 HDAC7Q8WUI4 952 aa16.86■□□□□ 0.29
CTNS-202ENST00000381870 MCM8Q9UJA3 840 aa16.86■□□□□ 0.29
CTNS-202ENST00000381870 ANGEL1Q9UNK9 670 aaKnown RBP16.86■□□□□ 0.29
CTNS-202ENST00000381870 PCDHB6Q9Y5E3 794 aa16.86■□□□□ 0.29
CTNS-202ENST00000381870 ADAMTS13Q76LX8 1427 aa16.86■□□□□ 0.29
CTNS-202ENST00000381870 RGPD8O14715 1765 aaPredicted RBP16.86■□□□□ 0.29
CTNS-202ENST00000381870 A0A087X0B3 334 aa16.86■□□□□ 0.29
CTNS-202ENST00000381870 PPP1R3GB7ZBB8 358 aa16.86■□□□□ 0.29
CTNS-202ENST00000381870 GOLGA8KD6RF30 607 aa16.86■□□□□ 0.29
CTNS-202ENST00000381870 C21orf2O43822 256 aa16.86■□□□□ 0.29
CTNS-202ENST00000381870 HERVK_113P62684 666 aa16.86■□□□□ 0.29
CTNS-202ENST00000381870 ATP2B2Q01814 1243 aa16.86■□□□□ 0.29
CTNS-202ENST00000381870 C1orf141Q5JVX7 400 aa16.86■□□□□ 0.29
CTNS-202ENST00000381870 CCDC122Q5T0U0 273 aa16.86■□□□□ 0.29
CTNS-202ENST00000381870 AMOTL1Q8IY63 956 aa16.86■□□□□ 0.29
CTNS-202ENST00000381870 STAG1Q8WVM7 1258 aa16.86■□□□□ 0.29
CTNS-202ENST00000381870 CSRNP2Q9H175 543 aa16.86■□□□□ 0.29
CTNS-202ENST00000381870 ATP1A2P50993 1020 aa16.85■□□□□ 0.29
CTNS-202ENST00000381870 CKAP4Q07065 602 aaKnown RBP16.85■□□□□ 0.29
CTNS-202ENST00000381870 NTRK3Q16288 839 aa16.85■□□□□ 0.29
CTNS-202ENST00000381870 APOA5Q6Q788 366 aa16.85■□□□□ 0.29
CTNS-202ENST00000381870 B4GALNT4Q76KP1 1039 aa16.85■□□□□ 0.29
CTNS-202ENST00000381870 CARD10Q9BWT7 1032 aa16.85■□□□□ 0.29
CTNS-202ENST00000381870 TAB2Q9NYJ8 693 aa16.85■□□□□ 0.29
CTNS-202ENST00000381870 KCNJ14Q9UNX9 436 aa16.85■□□□□ 0.29
CTNS-202ENST00000381870 CTNND2Q9UQB3 1225 aa16.85■□□□□ 0.29
CTNS-202ENST00000381870 A0A087WZG4 1122 aa16.85■□□□□ 0.29
CTNS-202ENST00000381870 ELF1P32519 619 aa16.85■□□□□ 0.29
CTNS-202ENST00000381870 SLC39A6Q13433 755 aa16.85■□□□□ 0.29
CTNS-202ENST00000381870 NEDD9Q14511 834 aa16.85■□□□□ 0.29
CTNS-202ENST00000381870 KANK3Q6NY19 840 aa16.85■□□□□ 0.29
CTNS-202ENST00000381870 SH2D3CQ8N5H7 860 aa16.85■□□□□ 0.29
CTNS-202ENST00000381870 AIDAQ96BJ3 306 aa16.85■□□□□ 0.29
CTNS-202ENST00000381870 SLC26A6Q9BXS9 759 aa16.85■□□□□ 0.29
CTNS-202ENST00000381870 PUS7LQ9H0K6 701 aaKnown RBP16.85■□□□□ 0.29
CTNS-202ENST00000381870 HAUS4Q9H6D7 363 aa16.85■□□□□ 0.29
CTNS-202ENST00000381870 KCNG1Q9UIX4 513 aa16.85■□□□□ 0.29
CTNS-202ENST00000381870 MARF1Q9Y4F3 1742 aaKnown RBP16.84■□□□□ 0.29
CTNS-202ENST00000381870 ZEB2O60315 1214 aa16.84■□□□□ 0.29
CTNS-202ENST00000381870 GUCY1A2P33402 732 aa16.84■□□□□ 0.29
CTNS-202ENST00000381870 TSEN2Q8NCE0 465 aaKnown RBP16.84■□□□□ 0.29
CTNS-202ENST00000381870 N4BP2L2Q92802 583 aaPredicted RBP16.84■□□□□ 0.29
CTNS-202ENST00000381870 RPGRIP1Q96KN7 1286 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms