RNA–Protein interactions for RNA: ENST00000381535.4

SYNGR1-204, Transcript of synaptogyrin 1, humanhuman

TSL 1 (best) BASIC

Gene SYNGR1, Length 1,295 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR1-204ENST00000381535 FSTL1Q12841 308 aa16.91■□□□□ 0.3
SYNGR1-204ENST00000381535 FOXD4L6Q3SYB3 417 aaPredicted RBP16.91■□□□□ 0.3
SYNGR1-204ENST00000381535 FOXD4L3Q6VB84 417 aaPredicted RBP16.91■□□□□ 0.3
SYNGR1-204ENST00000381535 CDC37L1Q7L3B6 337 aa16.91■□□□□ 0.3
SYNGR1-204ENST00000381535 SH3BP5LQ7L8J4 393 aa16.91■□□□□ 0.3
SYNGR1-204ENST00000381535 RBM28Q9NW13 759 aaKnown RBP16.91■□□□□ 0.3
SYNGR1-204ENST00000381535 TAOK2Q9UL54 1235 aa16.91■□□□□ 0.3
SYNGR1-204ENST00000381535 GJA3Q9Y6H8 435 aa16.91■□□□□ 0.3
SYNGR1-204ENST00000381535 FOCADQ5VW36 1801 aa16.91■□□□□ 0.3
SYNGR1-204ENST00000381535 TCP10L2B9ZVM9 353 aa16.9■□□□□ 0.3
SYNGR1-204ENST00000381535 FMNL1O95466 1100 aaPredicted RBP16.9■□□□□ 0.3
SYNGR1-204ENST00000381535 APLP1P51693 650 aa16.9■□□□□ 0.3
SYNGR1-204ENST00000381535 SPDYE2Q495Y8 402 aa16.9■□□□□ 0.3
SYNGR1-204ENST00000381535 DPY19L2Q6NUT2 758 aa16.9■□□□□ 0.3
SYNGR1-204ENST00000381535 CRACR2BQ8N4Y2 399 aaPredicted RBP16.9■□□□□ 0.3
SYNGR1-204ENST00000381535 PHKBQ93100 1093 aa16.9■□□□□ 0.3
SYNGR1-204ENST00000381535 ZBED3Q96IU2 234 aaPredicted RBP16.9■□□□□ 0.3
SYNGR1-204ENST00000381535 CHAMP1Q96JM3 812 aa16.9■□□□□ 0.3
SYNGR1-204ENST00000381535 SLC26A6Q9BXS9 759 aa16.9■□□□□ 0.3
SYNGR1-204ENST00000381535 TRIM34Q9BYJ4 488 aa16.9■□□□□ 0.3
SYNGR1-204ENST00000381535 MYOZ2Q9NPC6 264 aa16.9■□□□□ 0.3
SYNGR1-204ENST00000381535 CLRN2A0PK11 232 aa16.89■□□□□ 0.29
SYNGR1-204ENST00000381535 POTECB2RU33 542 aa16.89■□□□□ 0.29
SYNGR1-204ENST00000381535 MYO1BO43795 1136 aa16.89■□□□□ 0.29
SYNGR1-204ENST00000381535 AKR1B1P15121 316 aa16.89■□□□□ 0.29
SYNGR1-204ENST00000381535 SHMT1P34896 483 aa16.89■□□□□ 0.29
SYNGR1-204ENST00000381535 ZNF280AP59817 542 aaPredicted RBP16.89■□□□□ 0.29
SYNGR1-204ENST00000381535 FERMT3Q86UX7 667 aa16.89■□□□□ 0.29
SYNGR1-204ENST00000381535 TRIM22Q8IYM9 498 aa16.89■□□□□ 0.29
SYNGR1-204ENST00000381535 RGS22Q8NE09 1264 aa16.89■□□□□ 0.29
SYNGR1-204ENST00000381535 CTCFLQ8NI51 663 aaPredicted RBP16.89■□□□□ 0.29
SYNGR1-204ENST00000381535 FAM151AQ8WW52 585 aa16.89■□□□□ 0.29
SYNGR1-204ENST00000381535 WASF1Q92558 559 aa16.89■□□□□ 0.29
SYNGR1-204ENST00000381535 DPF2Q92785 391 aa16.89■□□□□ 0.29
SYNGR1-204ENST00000381535 C8orf76Q96K31 380 aa16.89■□□□□ 0.29
SYNGR1-204ENST00000381535 TMEM47Q9BQJ4 181 aa16.89■□□□□ 0.29
SYNGR1-204ENST00000381535 DDX60LQ5H9U9 1706 aaKnown RBP16.88■□□□□ 0.29
SYNGR1-204ENST00000381535 SHTN1A0MZ66 631 aa16.88■□□□□ 0.29
SYNGR1-204ENST00000381535 PRPF40AO75400 957 aaKnown RBP16.88■□□□□ 0.29
SYNGR1-204ENST00000381535 GMPSP49915 693 aaPredicted RBP16.88■□□□□ 0.29
SYNGR1-204ENST00000381535 GUCY1B3Q02153 619 aa16.88■□□□□ 0.29
SYNGR1-204ENST00000381535 FKBP1CQ5VVH2 108 aa16.88■□□□□ 0.29
SYNGR1-204ENST00000381535 NBPF11Q86T75 865 aa16.88■□□□□ 0.29
SYNGR1-204ENST00000381535 CCDC82Q8N4S0 544 aa16.88■□□□□ 0.29
SYNGR1-204ENST00000381535 DNAJC5GQ8N7S2 189 aa16.88■□□□□ 0.29
SYNGR1-204ENST00000381535 PNMA1Q8ND90 353 aa16.88■□□□□ 0.29
SYNGR1-204ENST00000381535 CCDC17Q96LX7 622 aa16.88■□□□□ 0.29
SYNGR1-204ENST00000381535 MAP3K14Q99558 947 aa16.88■□□□□ 0.29
SYNGR1-204ENST00000381535 ALG1Q9BT22 464 aa16.88■□□□□ 0.29
SYNGR1-204ENST00000381535 ZSCAN16Q9H4T2 348 aaPredicted RBP16.88■□□□□ 0.29
SYNGR1-204ENST00000381535 VEZTQ9HBM0 779 aa16.88■□□□□ 0.29
SYNGR1-204ENST00000381535 CNOT7Q9UIV1 285 aaKnown RBP16.88■□□□□ 0.29
SYNGR1-204ENST00000381535 STX8Q9UNK0 236 aa16.88■□□□□ 0.29
SYNGR1-204ENST00000381535 ECM29Q5VYK3 1845 aa16.87■□□□□ 0.29
SYNGR1-204ENST00000381535 TRAK2O60296 914 aa16.87■□□□□ 0.29
SYNGR1-204ENST00000381535 TOP1P11387 765 aaKnown RBP16.87■□□□□ 0.29
SYNGR1-204ENST00000381535 KIF5BP33176 963 aa16.87■□□□□ 0.29
SYNGR1-204ENST00000381535 NOVP48745 357 aa16.87■□□□□ 0.29
SYNGR1-204ENST00000381535 AKAP17AQ02040 695 aaKnown RBP16.87■□□□□ 0.29
SYNGR1-204ENST00000381535 RESTQ13127 1097 aa16.87■□□□□ 0.29
SYNGR1-204ENST00000381535 RBM26Q5T8P6 1007 aaKnown RBP16.87■□□□□ 0.29
SYNGR1-204ENST00000381535 OTUD7BQ6GQQ9 843 aa16.87■□□□□ 0.29
SYNGR1-204ENST00000381535 METTL16Q86W50 562 aaKnown RBP16.87■□□□□ 0.29
SYNGR1-204ENST00000381535 CMTR1Q8N1G2 835 aaKnown RBP16.87■□□□□ 0.29
SYNGR1-204ENST00000381535 FBXO18Q8NFZ0 1043 aa16.87■□□□□ 0.29
SYNGR1-204ENST00000381535 CEP95Q96GE4 821 aa16.87■□□□□ 0.29
SYNGR1-204ENST00000381535 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.87■□□□□ 0.29
SYNGR1-204ENST00000381535 LMBRD1Q9NUN5 540 aa16.87■□□□□ 0.29
SYNGR1-204ENST00000381535 STK36Q9NRP7 1315 aa16.87■□□□□ 0.29
SYNGR1-204ENST00000381535 IGKV6D-41A0A0C4DH26 115 aa16.86■□□□□ 0.29
SYNGR1-204ENST00000381535 MPHOSPH10O00566 681 aaKnown RBP16.86■□□□□ 0.29
SYNGR1-204ENST00000381535 WNT10BO00744 389 aa16.86■□□□□ 0.29
SYNGR1-204ENST00000381535 SLURP2P0DP57 97 aa16.86■□□□□ 0.29
SYNGR1-204ENST00000381535 DNM1Q05193 864 aaKnown RBP16.86■□□□□ 0.29
SYNGR1-204ENST00000381535 SKOR2Q2VWA4 1001 aaPredicted RBP16.86■□□□□ 0.29
SYNGR1-204ENST00000381535 NBPF9Q3BBW0 867 aa16.86■□□□□ 0.29
SYNGR1-204ENST00000381535 CERKLQ49MI3 558 aaPredicted RBP16.86■□□□□ 0.29
SYNGR1-204ENST00000381535 TATDN1Q6P1N9 297 aa16.86■□□□□ 0.29
SYNGR1-204ENST00000381535 TMTC3Q6ZXV5 915 aa16.86■□□□□ 0.29
SYNGR1-204ENST00000381535 MTMR4Q9NYA4 1195 aa16.86■□□□□ 0.29
SYNGR1-204ENST00000381535 SBF1O95248 1867 aa16.86■□□□□ 0.29
SYNGR1-204ENST00000381535 PRPF3O43395 683 aaKnown RBP16.85■□□□□ 0.29
SYNGR1-204ENST00000381535 PLEKHA8P1O95397 391 aa16.85■□□□□ 0.29
SYNGR1-204ENST00000381535 DEXIO95424 95 aa16.85■□□□□ 0.29
SYNGR1-204ENST00000381535 GNAQP50148 359 aa16.85■□□□□ 0.29
SYNGR1-204ENST00000381535 FUT2Q10981 343 aa16.85■□□□□ 0.29
SYNGR1-204ENST00000381535 GRM4Q14833 912 aa16.85■□□□□ 0.29
SYNGR1-204ENST00000381535 PPP4R3BQ5MIZ7 849 aa16.85■□□□□ 0.29
SYNGR1-204ENST00000381535 FAM83AQ86UY5 434 aa16.85■□□□□ 0.29
SYNGR1-204ENST00000381535 MICALL2Q8IY33 904 aa16.85■□□□□ 0.29
SYNGR1-204ENST00000381535 SRBD1Q8N5C6 995 aaKnown RBP16.85■□□□□ 0.29
SYNGR1-204ENST00000381535 SMC1BQ8NDV3 1235 aa16.85■□□□□ 0.29
SYNGR1-204ENST00000381535 AIFM3Q96NN9 605 aa16.85■□□□□ 0.29
SYNGR1-204ENST00000381535 CSRNP1Q96S65 589 aa16.85■□□□□ 0.29
SYNGR1-204ENST00000381535 RNF26Q9BY78 433 aaPredicted RBP16.85■□□□□ 0.29
SYNGR1-204ENST00000381535 DNAJC18Q9H819 358 aa16.85■□□□□ 0.29
SYNGR1-204ENST00000381535 CNPY2Q9Y2B0 182 aa16.85■□□□□ 0.29
SYNGR1-204ENST00000381535 V9GY48 417 aaPredicted RBP16.85■□□□□ 0.29
SYNGR1-204ENST00000381535 ATRNL1Q5VV63 1379 aa16.85■□□□□ 0.29
SYNGR1-204ENST00000381535 FAM196BA6NMK8 535 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms