RNA–Protein interactions for RNA: ENST00000381089.7

VCX3A-201, Transcript of variable charge X-linked 3A, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene VCX3A, Length 995 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-201ENST00000381089 WDR78Q5VTH9 848 aa19.49■□□□□ 0.71
VCX3A-201ENST00000381089 MFSD14CQ5VZR4 134 aa19.49■□□□□ 0.71
VCX3A-201ENST00000381089 TTC6Q86TZ1 520 aa19.49■□□□□ 0.71
VCX3A-201ENST00000381089 USP6NLQ92738 828 aa19.49■□□□□ 0.71
VCX3A-201ENST00000381089 UBE2OQ9C0C9 1292 aaKnown RBP19.49■□□□□ 0.71
VCX3A-201ENST00000381089 EHD4Q9H223 541 aa19.49■□□□□ 0.71
VCX3A-201ENST00000381089 CABP5Q9NP86 173 aa19.49■□□□□ 0.71
VCX3A-201ENST00000381089 DLL1O00548 723 aa19.48■□□□□ 0.71
VCX3A-201ENST00000381089 MAP3K12Q12852 859 aa19.48■□□□□ 0.71
VCX3A-201ENST00000381089 MAP2K5Q13163 448 aa19.48■□□□□ 0.71
VCX3A-201ENST00000381089 RAB3GAP1Q15042 981 aa19.48■□□□□ 0.71
VCX3A-201ENST00000381089 ZYXQ15942 572 aaKnown RBP19.48■□□□□ 0.71
VCX3A-201ENST00000381089 CERKLQ49MI3 558 aaPredicted RBP19.48■□□□□ 0.71
VCX3A-201ENST00000381089 TATDN1Q6P1N9 297 aa19.48■□□□□ 0.71
VCX3A-201ENST00000381089 MAGEB6Q8N7X4 407 aa19.48■□□□□ 0.71
VCX3A-201ENST00000381089 MIGA1Q8NAN2 632 aa19.48■□□□□ 0.71
VCX3A-201ENST00000381089 EDC3Q96F86 508 aaKnown RBP19.48■□□□□ 0.71
VCX3A-201ENST00000381089 DBNLQ9UJU6 430 aaKnown RBP19.48■□□□□ 0.71
VCX3A-201ENST00000381089 NOP58Q9Y2X3 529 aaKnown RBP19.48■□□□□ 0.71
VCX3A-201ENST00000381089 IVNS1ABPQ9Y6Y0 642 aa19.48■□□□□ 0.71
VCX3A-201ENST00000381089 MYH1P12882 1939 aa19.48■□□□□ 0.71
VCX3A-201ENST00000381089 PFASO15067 1338 aa19.48■□□□□ 0.71
VCX3A-201ENST00000381089 CCND3P30281 292 aaPredicted RBP19.47■□□□□ 0.71
VCX3A-201ENST00000381089 CCL14Q16627 93 aa19.47■□□□□ 0.71
VCX3A-201ENST00000381089 ABCB5Q2M3G0 1257 aa19.47■□□□□ 0.71
VCX3A-201ENST00000381089 DEFB123Q8N688 67 aa19.47■□□□□ 0.71
VCX3A-201ENST00000381089 CCDC8Q9H0W5 538 aaPredicted RBP19.47■□□□□ 0.71
VCX3A-201ENST00000381089 MYO5AQ9Y4I1 1855 aaKnown RBP19.47■□□□□ 0.71
VCX3A-201ENST00000381089 COL6A3P12111 3177 aa19.46■□□□□ 0.71
VCX3A-201ENST00000381089 MSCO60682 206 aa19.46■□□□□ 0.71
VCX3A-201ENST00000381089 COL6A1P12109 1028 aa19.46■□□□□ 0.71
VCX3A-201ENST00000381089 ITPRIPQ8IWB1 547 aa19.46■□□□□ 0.71
VCX3A-201ENST00000381089 KIAA1683Q9H0B3 1180 aa19.46■□□□□ 0.71
VCX3A-201ENST00000381089 C1orf115Q9H7X2 142 aa19.46■□□□□ 0.71
VCX3A-201ENST00000381089 SLC15A5A6NIM6 579 aa19.45■□□□□ 0.7
VCX3A-201ENST00000381089 LHX8Q68G74 356 aa19.45■□□□□ 0.7
VCX3A-201ENST00000381089 CATSPERGQ6ZRH7 1159 aa19.45■□□□□ 0.7
VCX3A-201ENST00000381089 ERC1Q8IUD2 1116 aa19.45■□□□□ 0.7
VCX3A-201ENST00000381089 TLR7Q9NYK1 1049 aaKnown RBP19.45■□□□□ 0.7
VCX3A-201ENST00000381089 VCAM1P19320 739 aa19.44■□□□□ 0.7
VCX3A-201ENST00000381089 ATP2B2Q01814 1243 aa19.44■□□□□ 0.7
VCX3A-201ENST00000381089 LBX2Q6XYB7 198 aa19.44■□□□□ 0.7
VCX3A-201ENST00000381089 EAF2Q96CJ1 260 aaPredicted RBP19.44■□□□□ 0.7
VCX3A-201ENST00000381089 CNMDO75829 334 aa19.43■□□□□ 0.7
VCX3A-201ENST00000381089 POLR3DP05423 398 aaPredicted RBP19.43■□□□□ 0.7
VCX3A-201ENST00000381089 PTPREP23469 700 aa19.43■□□□□ 0.7
VCX3A-201ENST00000381089 TTF1Q15361 905 aaPredicted RBP19.43■□□□□ 0.7
VCX3A-201ENST00000381089 LRRC26Q2I0M4 334 aa19.43■□□□□ 0.7
VCX3A-201ENST00000381089 LBHD1Q9BQE6 289 aaPredicted RBP19.43■□□□□ 0.7
VCX3A-201ENST00000381089 CNGA1P29973 690 aa19.42■□□□□ 0.7
VCX3A-201ENST00000381089 SENP6Q9GZR1 1112 aaPredicted RBP19.42■□□□□ 0.7
VCX3A-201ENST00000381089 RPAP3Q9H6T3 665 aaPredicted RBP19.42■□□□□ 0.7
VCX3A-201ENST00000381089 PRKAG2Q9UGJ0 569 aa19.42■□□□□ 0.7
VCX3A-201ENST00000381089 DDX20Q9UHI6 824 aaKnown RBP19.42■□□□□ 0.7
VCX3A-201ENST00000381089 STXBP5LQ9Y2K9 1186 aa19.42■□□□□ 0.7
VCX3A-201ENST00000381089 NDUFB9Q9Y6M9 179 aa19.42■□□□□ 0.7
VCX3A-201ENST00000381089 MAGEB6P1A0A0J9YX57 407 aa19.41■□□□□ 0.7
VCX3A-201ENST00000381089 HOXC6P09630 235 aa19.41■□□□□ 0.7
VCX3A-201ENST00000381089 GRB14Q14449 540 aa19.41■□□□□ 0.7
VCX3A-201ENST00000381089 HSP90AB4PQ58FF6 505 aa19.41■□□□□ 0.7
VCX3A-201ENST00000381089 POTEEQ6S8J3 1075 aa19.41■□□□□ 0.7
VCX3A-201ENST00000381089 AACSQ86V21 672 aa19.41■□□□□ 0.7
VCX3A-201ENST00000381089 ACER1Q8TDN7 264 aa19.41■□□□□ 0.7
VCX3A-201ENST00000381089 LPAR1Q92633 364 aa19.41■□□□□ 0.7
VCX3A-201ENST00000381089 CRNKL1Q9BZJ0 848 aaKnown RBP19.41■□□□□ 0.7
VCX3A-201ENST00000381089 SHMT1P34896 483 aa19.4■□□□□ 0.7
VCX3A-201ENST00000381089 MDM2Q00987 491 aaPredicted RBP19.4■□□□□ 0.7
VCX3A-201ENST00000381089 Q7L0L9 218 aa19.4■□□□□ 0.7
VCX3A-201ENST00000381089 DPP9Q86TI2 863 aa19.4■□□□□ 0.7
VCX3A-201ENST00000381089 ANTXR1Q9H6X2 564 aa19.4■□□□□ 0.7
VCX3A-201ENST00000381089 HOXC10Q9NYD6 342 aa19.4■□□□□ 0.7
VCX3A-201ENST00000381089 SPDYE16A6NNV3 312 aaPredicted RBP19.39■□□□□ 0.69
VCX3A-201ENST00000381089 DNM1LO00429 736 aa19.39■□□□□ 0.69
VCX3A-201ENST00000381089 MPHOSPH10O00566 681 aaKnown RBP19.39■□□□□ 0.69
VCX3A-201ENST00000381089 PLCD1P51178 756 aa19.39■□□□□ 0.69
VCX3A-201ENST00000381089 MTMR10Q9NXD2 777 aa19.39■□□□□ 0.69
VCX3A-201ENST00000381089 SLC5A4Q9NY91 659 aa19.39■□□□□ 0.69
VCX3A-201ENST00000381089 FLRT1Q9NZU1 646 aa19.39■□□□□ 0.69
VCX3A-201ENST00000381089 BTBD7Q9P203 1132 aa19.39■□□□□ 0.69
VCX3A-201ENST00000381089 A0A0C4DFX4 3053 aa19.39■□□□□ 0.69
VCX3A-201ENST00000381089 FRMPD3Q5JV73 1810 aa19.39■□□□□ 0.69
VCX3A-201ENST00000381089 STRNO43815 780 aa19.38■□□□□ 0.69
VCX3A-201ENST00000381089 COG2Q14746 738 aa19.38■□□□□ 0.69
VCX3A-201ENST00000381089 CEP85Q6P2H3 762 aa19.38■□□□□ 0.69
VCX3A-201ENST00000381089 ARRDC4Q8NCT1 418 aa19.38■□□□□ 0.69
VCX3A-201ENST00000381089 RIOK1Q9BRS2 568 aaKnown RBP19.38■□□□□ 0.69
VCX3A-201ENST00000381089 TANGO6Q9C0B7 1094 aa19.38■□□□□ 0.69
VCX3A-201ENST00000381089 MCM9Q9NXL9 1143 aa19.38■□□□□ 0.69
VCX3A-201ENST00000381089 EXOC6BQ9Y2D4 811 aa19.38■□□□□ 0.69
VCX3A-201ENST00000381089 NAV1Q8NEY1 1877 aa19.37■□□□□ 0.69
VCX3A-201ENST00000381089 CYP2C19P33261 490 aa19.37■□□□□ 0.69
VCX3A-201ENST00000381089 SEPT2Q15019 361 aa19.37■□□□□ 0.69
VCX3A-201ENST00000381089 SLC9C2Q5TAH2 1124 aa19.37■□□□□ 0.69
VCX3A-201ENST00000381089 ATN1P54259 1190 aaPredicted RBP19.36■□□□□ 0.69
VCX3A-201ENST00000381089 OLFML2BQ68BL8 750 aa19.36■□□□□ 0.69
VCX3A-201ENST00000381089 MB21D1Q8N884 522 aa19.36■□□□□ 0.69
VCX3A-201ENST00000381089 SHCBP1Q8NEM2 672 aa19.36■□□□□ 0.69
VCX3A-201ENST00000381089 NPLOC4Q8TAT6 608 aa19.36■□□□□ 0.69
VCX3A-201ENST00000381089 SH2D4AQ9H788 454 aa19.36■□□□□ 0.69
VCX3A-201ENST00000381089 DNAH12Q6ZR08 3092 aa19.35■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms