RNA–Protein interactions for RNA: ENST00000380443.5

VPS16-201, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 1 (best)

Gene VPS16, Length 1,825 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-201ENST00000380443 CYP2D6P10635 497 aa26.6■■□□□ 1.85
VPS16-201ENST00000380443 MARCKSP29966 332 aaPredicted RBP26.6■■□□□ 1.85
VPS16-201ENST00000380443 SYKP43405 635 aa26.6■■□□□ 1.85
VPS16-201ENST00000380443 PKN1Q16512 942 aa26.6■■□□□ 1.85
VPS16-201ENST00000380443 ZNF579Q8NAF0 562 aaKnown RBP26.6■■□□□ 1.85
VPS16-201ENST00000380443 SGIP1Q9BQI5 828 aa26.6■■□□□ 1.85
VPS16-201ENST00000380443 PHF20Q9BVI0 1012 aa26.6■■□□□ 1.85
VPS16-201ENST00000380443 KCNJ14Q9UNX9 436 aa26.6■■□□□ 1.85
VPS16-201ENST00000380443 AP5Z1O43299 807 aa26.59■■□□□ 1.85
VPS16-201ENST00000380443 BMP15O95972 392 aa26.59■■□□□ 1.85
VPS16-201ENST00000380443 USP17L8P0C7I0 530 aa26.59■■□□□ 1.85
VPS16-201ENST00000380443 CCDC82Q8N4S0 544 aa26.59■■□□□ 1.85
VPS16-201ENST00000380443 PPEF1O14829 653 aaPredicted RBP26.58■■□□□ 1.85
VPS16-201ENST00000380443 KRT2P35908 639 aa26.58■■□□□ 1.85
VPS16-201ENST00000380443 PDZRN4Q6ZMN7 1036 aaPredicted RBP26.58■■□□□ 1.85
VPS16-201ENST00000380443 ATP6V0A2Q9Y487 856 aa26.58■■□□□ 1.85
VPS16-201ENST00000380443 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP26.58■■□□□ 1.85
VPS16-201ENST00000380443 NRXN2Q9P2S2 1712 aa26.58■■□□□ 1.85
VPS16-201ENST00000380443 UBE2Q2LH0YL09 131 aa26.58■■□□□ 1.84
VPS16-201ENST00000380443 CDC25BP30305 580 aa26.58■■□□□ 1.84
VPS16-201ENST00000380443 GNAQP50148 359 aa26.58■■□□□ 1.84
VPS16-201ENST00000380443 PLA2G4DQ86XP0 818 aa26.58■■□□□ 1.84
VPS16-201ENST00000380443 COA1Q9GZY4 146 aa26.58■■□□□ 1.84
VPS16-201ENST00000380443 POLLQ9UGP5 575 aa26.58■■□□□ 1.84
VPS16-201ENST00000380443 V9GY48 417 aaPredicted RBP26.58■■□□□ 1.84
VPS16-201ENST00000380443 BECN2A8MW95 431 aa26.57■■□□□ 1.84
VPS16-201ENST00000380443 OFD1O75665 1012 aa26.57■■□□□ 1.84
VPS16-201ENST00000380443 NPR1P16066 1061 aa26.57■■□□□ 1.84
VPS16-201ENST00000380443 TOB1P50616 345 aaPredicted RBP26.57■■□□□ 1.84
VPS16-201ENST00000380443 FAM47AQ5JRC9 791 aa26.57■■□□□ 1.84
VPS16-201ENST00000380443 SHC4Q6S5L8 630 aa26.57■■□□□ 1.84
VPS16-201ENST00000380443 CMTR1Q8N1G2 835 aaKnown RBP26.57■■□□□ 1.84
VPS16-201ENST00000380443 KAT14Q9H8E8 782 aa26.57■■□□□ 1.84
VPS16-201ENST00000380443 MKNK2Q9HBH9 465 aa26.57■■□□□ 1.84
VPS16-201ENST00000380443 LTBP1Q14766 1721 aa26.57■■□□□ 1.84
VPS16-201ENST00000380443 PTPREP23469 700 aa26.56■■□□□ 1.84
VPS16-201ENST00000380443 ALDH1B1P30837 517 aa26.56■■□□□ 1.84
VPS16-201ENST00000380443 ZNF75DP51815 510 aa26.56■■□□□ 1.84
VPS16-201ENST00000380443 TFAP4Q01664 338 aa26.56■■□□□ 1.84
VPS16-201ENST00000380443 DIXDC1Q155Q3 683 aa26.56■■□□□ 1.84
VPS16-201ENST00000380443 FAM177A1Q8N128 213 aaPredicted RBP26.56■■□□□ 1.84
VPS16-201ENST00000380443 HOOK1Q9UJC3 728 aaKnown RBP26.56■■□□□ 1.84
VPS16-201ENST00000380443 GAKO14976 1311 aa26.56■■□□□ 1.84
VPS16-201ENST00000380443 NAV1Q8NEY1 1877 aa26.56■■□□□ 1.84
VPS16-201ENST00000380443 PLEKHA8P1O95397 391 aa26.55■■□□□ 1.84
VPS16-201ENST00000380443 BTDP43251 543 aa26.55■■□□□ 1.84
VPS16-201ENST00000380443 RCSD1Q6JBY9 416 aa26.55■■□□□ 1.84
VPS16-201ENST00000380443 C11orf57Q6ZUT1 292 aaPredicted RBP26.55■■□□□ 1.84
VPS16-201ENST00000380443 ZNF444Q8N0Y2 327 aaPredicted RBP26.55■■□□□ 1.84
VPS16-201ENST00000380443 FAM13BQ9NYF5 915 aa26.55■■□□□ 1.84
VPS16-201ENST00000380443 CNTNAP5Q8WYK1 1306 aa26.55■■□□□ 1.84
VPS16-201ENST00000380443 C6orf229H3BNL8 230 aa26.55■■□□□ 1.84
VPS16-201ENST00000380443 PDE6BP35913 854 aa26.55■■□□□ 1.84
VPS16-201ENST00000380443 NLRP12P59046 1061 aa26.55■■□□□ 1.84
VPS16-201ENST00000380443 TGFBRAP1Q8WUH2 860 aa26.55■■□□□ 1.84
VPS16-201ENST00000380443 GPR101Q96P66 508 aaPredicted RBP26.55■■□□□ 1.84
VPS16-201ENST00000380443 TRIM5Q9C035 493 aa26.55■■□□□ 1.84
VPS16-201ENST00000380443 GRIK5Q16478 980 aa26.54■■□□□ 1.84
VPS16-201ENST00000380443 MFSD14BQ5SR56 506 aa26.54■■□□□ 1.84
VPS16-201ENST00000380443 SRPRBQ9Y5M8 271 aaKnown RBP26.54■■□□□ 1.84
VPS16-201ENST00000380443 SRBD1Q8N5C6 995 aaKnown RBP26.53■■□□□ 1.84
VPS16-201ENST00000380443 SH3GLB2Q9NR46 395 aa26.53■■□□□ 1.84
VPS16-201ENST00000380443 TUBE1Q9UJT0 475 aa26.53■■□□□ 1.84
VPS16-201ENST00000380443 TEX11Q8IYF3 940 aa26.53■■□□□ 1.84
VPS16-201ENST00000380443 KCNH3Q9ULD8 1083 aa26.53■■□□□ 1.84
VPS16-201ENST00000380443 TRIM75PA6NK02 468 aa26.52■■□□□ 1.84
VPS16-201ENST00000380443 MMP10P09238 476 aa26.52■■□□□ 1.84
VPS16-201ENST00000380443 SRGNP10124 158 aa26.52■■□□□ 1.84
VPS16-201ENST00000380443 SCG2P13521 617 aa26.52■■□□□ 1.84
VPS16-201ENST00000380443 NR5A1Q13285 461 aa26.52■■□□□ 1.84
VPS16-201ENST00000380443 PFKFB3Q16875 520 aaPredicted RBP26.52■■□□□ 1.84
VPS16-201ENST00000380443 MRFAP1L1Q96HT8 127 aa26.52■■□□□ 1.84
VPS16-201ENST00000380443 LZTS2Q9BRK4 669 aa26.52■■□□□ 1.84
VPS16-201ENST00000380443 TMX4Q9H1E5 349 aaPredicted RBP26.52■■□□□ 1.84
VPS16-201ENST00000380443 CABP5Q9NP86 173 aa26.52■■□□□ 1.84
VPS16-201ENST00000380443 VPS54Q9P1Q0 977 aa26.52■■□□□ 1.84
VPS16-201ENST00000380443 FBXO2Q9UK22 296 aaPredicted RBP26.52■■□□□ 1.84
VPS16-201ENST00000380443 NMT2O60551 498 aa26.51■■□□□ 1.83
VPS16-201ENST00000380443 TSPY3P0CV98 308 aa26.51■■□□□ 1.83
VPS16-201ENST00000380443 TSPY8P0CW00 308 aa26.51■■□□□ 1.83
VPS16-201ENST00000380443 TRAPPC10P48553 1259 aa26.51■■□□□ 1.83
VPS16-201ENST00000380443 DHX40Q8IX18 779 aaKnown RBP26.51■■□□□ 1.83
VPS16-201ENST00000380443 SMTNL1A8MU46 457 aa26.51■■□□□ 1.83
VPS16-201ENST00000380443 CALML3P27482 149 aa26.51■■□□□ 1.83
VPS16-201ENST00000380443 TPM4P67936 248 aa26.51■■□□□ 1.83
VPS16-201ENST00000380443 EVX2Q03828 476 aa26.51■■□□□ 1.83
VPS16-201ENST00000380443 GRM4Q14833 912 aa26.51■■□□□ 1.83
VPS16-201ENST00000380443 KANK3Q6NY19 840 aa26.51■■□□□ 1.83
VPS16-201ENST00000380443 C16orf86Q6ZW13 317 aa26.51■■□□□ 1.83
VPS16-201ENST00000380443 SLC51AQ86UW1 340 aa26.51■■□□□ 1.83
VPS16-201ENST00000380443 PNMA1Q8ND90 353 aa26.51■■□□□ 1.83
VPS16-201ENST00000380443 OXER1Q8TDS5 423 aa26.51■■□□□ 1.83
VPS16-201ENST00000380443 IL17RBQ9NRM6 502 aa26.51■■□□□ 1.83
VPS16-201ENST00000380443 ANKRD31Q8N7Z5 1873 aa26.5■■□□□ 1.83
VPS16-201ENST00000380443 KRBA2Q6ZNG9 492 aa26.5■■□□□ 1.83
VPS16-201ENST00000380443 PIBF1Q8WXW3 757 aa26.5■■□□□ 1.83
VPS16-201ENST00000380443 TAOK2Q9UL54 1235 aa26.5■■□□□ 1.83
VPS16-201ENST00000380443 PARP3Q9Y6F1 533 aa26.5■■□□□ 1.83
VPS16-201ENST00000380443 TERF1P54274 439 aa26.49■■□□□ 1.83
VPS16-201ENST00000380443 MAPKAPK5Q8IW41 473 aa26.49■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms