RNA–Protein interactions for RNA: ENST00000380180.7

PDLIM5-205, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 2,020 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-205ENST00000380180 FKBP1AP62942 108 aaKnown RBP22.96■■□□□ 1.27
PDLIM5-205ENST00000380180 APOBEC3HQ6NTF7 200 aaKnown RBP22.96■■□□□ 1.27
PDLIM5-205ENST00000380180 DIS3L2Q8IYB7 885 aaKnown RBP22.96■■□□□ 1.27
PDLIM5-205ENST00000380180 RNF214Q8ND24 703 aa22.96■■□□□ 1.27
PDLIM5-205ENST00000380180 PNMA1Q8ND90 353 aa22.96■■□□□ 1.27
PDLIM5-205ENST00000380180 KCNG4Q8TDN1 519 aa22.96■■□□□ 1.27
PDLIM5-205ENST00000380180 SLC16A10Q8TF71 515 aa22.96■■□□□ 1.27
PDLIM5-205ENST00000380180 FUCA2Q9BTY2 467 aa22.96■■□□□ 1.27
PDLIM5-205ENST00000380180 CRKP46108 304 aa22.95■■□□□ 1.26
PDLIM5-205ENST00000380180 KIAA2012Q0VF49 1180 aa22.95■■□□□ 1.26
PDLIM5-205ENST00000380180 SF3A1Q15459 793 aaKnown RBP22.95■■□□□ 1.26
PDLIM5-205ENST00000380180 ADALQ6DHV7 355 aa22.95■■□□□ 1.26
PDLIM5-205ENST00000380180 CDC42EP5Q6NZY7 148 aa22.95■■□□□ 1.26
PDLIM5-205ENST00000380180 KIAA0825Q8IV33 1275 aa22.95■■□□□ 1.26
PDLIM5-205ENST00000380180 TNMDQ9H2S6 317 aa22.95■■□□□ 1.26
PDLIM5-205ENST00000380180 GOLPH3LQ9H4A5 285 aa22.95■■□□□ 1.26
PDLIM5-205ENST00000380180 NOSTRINQ8IVI9 506 aa22.94■■□□□ 1.26
PDLIM5-205ENST00000380180 TTLL6Q8N841 843 aa22.94■■□□□ 1.26
PDLIM5-205ENST00000380180 CLSTN2Q9H4D0 955 aa22.94■■□□□ 1.26
PDLIM5-205ENST00000380180 GOLGB1Q14789 3259 aaKnown RBP22.94■■□□□ 1.26
PDLIM5-205ENST00000380180 CNTNAP5Q8WYK1 1306 aa22.94■■□□□ 1.26
PDLIM5-205ENST00000380180 MAP3K11Q16584 847 aa22.94■■□□□ 1.26
PDLIM5-205ENST00000380180 SUPT20HQ8NEM7 779 aa22.94■■□□□ 1.26
PDLIM5-205ENST00000380180 NEDD1Q8NHV4 660 aa22.94■■□□□ 1.26
PDLIM5-205ENST00000380180 SHISA4Q96DD7 197 aa22.94■■□□□ 1.26
PDLIM5-205ENST00000380180 MRIQ9BWK5 157 aa22.94■■□□□ 1.26
PDLIM5-205ENST00000380180 FOXP1Q9H334 677 aaPredicted RBP22.94■■□□□ 1.26
PDLIM5-205ENST00000380180 STX8Q9UNK0 236 aa22.94■■□□□ 1.26
PDLIM5-205ENST00000380180 KIF5BP33176 963 aa22.93■■□□□ 1.26
PDLIM5-205ENST00000380180 SLC39A14Q15043 492 aa22.93■■□□□ 1.26
PDLIM5-205ENST00000380180 MAP3K14Q99558 947 aa22.93■■□□□ 1.26
PDLIM5-205ENST00000380180 VPS54Q9P1Q0 977 aa22.93■■□□□ 1.26
PDLIM5-205ENST00000380180 KIF13BQ9NQT8 1826 aa22.93■■□□□ 1.26
PDLIM5-205ENST00000380180 XBP1P17861 261 aa22.92■■□□□ 1.26
PDLIM5-205ENST00000380180 ZDHHC15Q96MV8 337 aa22.92■■□□□ 1.26
PDLIM5-205ENST00000380180 TMEM47Q9BQJ4 181 aa22.92■■□□□ 1.26
PDLIM5-205ENST00000380180 PSME4Q14997 1843 aa22.92■■□□□ 1.26
PDLIM5-205ENST00000380180 KCNA3P22001 575 aa22.92■■□□□ 1.26
PDLIM5-205ENST00000380180 SNW1Q13573 536 aaKnown RBP22.92■■□□□ 1.26
PDLIM5-205ENST00000380180 CCDC73Q6ZRK6 1079 aa22.92■■□□□ 1.26
PDLIM5-205ENST00000380180 FSIP1Q8NA03 581 aa22.92■■□□□ 1.26
PDLIM5-205ENST00000380180 ANP32BQ92688 251 aaKnown RBP22.92■■□□□ 1.26
PDLIM5-205ENST00000380180 A0A1W2PQ27 194 aa22.91■■□□□ 1.26
PDLIM5-205ENST00000380180 A0A1W2PQ64 194 aa22.91■■□□□ 1.26
PDLIM5-205ENST00000380180 A0A1W2PQD8 194 aa22.91■■□□□ 1.26
PDLIM5-205ENST00000380180 PPIP5K2O43314 1243 aa22.91■■□□□ 1.26
PDLIM5-205ENST00000380180 GABPAQ06546 454 aa22.91■■□□□ 1.26
PDLIM5-205ENST00000380180 NR5A1Q13285 461 aa22.91■■□□□ 1.26
PDLIM5-205ENST00000380180 CKAP2LQ8IYA6 745 aa22.91■■□□□ 1.26
PDLIM5-205ENST00000380180 ENGASEQ8NFI3 743 aa22.91■■□□□ 1.26
PDLIM5-205ENST00000380180 OXER1Q8TDS5 423 aa22.91■■□□□ 1.26
PDLIM5-205ENST00000380180 PCDHAC2Q9Y5I4 1007 aa22.91■■□□□ 1.26
PDLIM5-205ENST00000380180 DPEP1P16444 411 aa22.91■■□□□ 1.26
PDLIM5-205ENST00000380180 STAG2Q8N3U4 1231 aa22.91■■□□□ 1.26
PDLIM5-205ENST00000380180 PHF20Q9BVI0 1012 aa22.91■■□□□ 1.26
PDLIM5-205ENST00000380180 OSBPL5Q9H0X9 879 aaPredicted RBP22.91■■□□□ 1.26
PDLIM5-205ENST00000380180 HDLBPQ00341 1268 aaKnown RBP22.9■■□□□ 1.26
PDLIM5-205ENST00000380180 FAM160A1Q05DH4 1040 aa22.9■■□□□ 1.26
PDLIM5-205ENST00000380180 GRM4Q14833 912 aa22.9■■□□□ 1.26
PDLIM5-205ENST00000380180 PTPAQ15257 358 aa22.9■■□□□ 1.26
PDLIM5-205ENST00000380180 RBM43Q6ZSC3 357 aaKnown RBP22.9■■□□□ 1.26
PDLIM5-205ENST00000380180 MRPS27Q92552 414 aaKnown RBP22.9■■□□□ 1.26
PDLIM5-205ENST00000380180 MAD2L2Q9UI95 211 aa22.9■■□□□ 1.26
PDLIM5-205ENST00000380180 CCDC192P0DO97 292 aa22.89■■□□□ 1.26
PDLIM5-205ENST00000380180 MARCKSP29966 332 aaPredicted RBP22.89■■□□□ 1.26
PDLIM5-205ENST00000380180 TOB1P50616 345 aaPredicted RBP22.89■■□□□ 1.26
PDLIM5-205ENST00000380180 NFIAQ12857 509 aa22.89■■□□□ 1.26
PDLIM5-205ENST00000380180 A0A1B0GVL5 298 aa22.89■■□□□ 1.25
PDLIM5-205ENST00000380180 YDJCA8MPS7 323 aa22.89■■□□□ 1.25
PDLIM5-205ENST00000380180 RBM5P52756 815 aaKnown RBP eCLIP22.89■■□□□ 1.25
PDLIM5-205ENST00000380180 GRIPAP1Q4V328 841 aa22.89■■□□□ 1.25
PDLIM5-205ENST00000380180 CCDC93Q567U6 631 aa22.89■■□□□ 1.25
PDLIM5-205ENST00000380180 AXDND1Q5T1B0 1012 aaPredicted RBP22.89■■□□□ 1.25
PDLIM5-205ENST00000380180 CEP95Q96GE4 821 aa22.89■■□□□ 1.25
PDLIM5-205ENST00000380180 RTKN2Q8IZC4 609 aa22.88■■□□□ 1.25
PDLIM5-205ENST00000380180 PIBF1Q8WXW3 757 aa22.88■■□□□ 1.25
PDLIM5-205ENST00000380180 SERPINB13Q9UIV8 391 aa22.88■■□□□ 1.25
PDLIM5-205ENST00000380180 MTMR7Q9Y216 660 aa22.88■■□□□ 1.25
PDLIM5-205ENST00000380180 PPP6R2O75170 966 aa22.87■■□□□ 1.25
PDLIM5-205ENST00000380180 SCG2P13521 617 aa22.87■■□□□ 1.25
PDLIM5-205ENST00000380180 CCDC173Q0VFZ6 552 aa22.87■■□□□ 1.25
PDLIM5-205ENST00000380180 VEGFAP15692 232 aaPredicted RBP22.87■■□□□ 1.25
PDLIM5-205ENST00000380180 GNAQP50148 359 aa22.87■■□□□ 1.25
PDLIM5-205ENST00000380180 PFKFB3Q16875 520 aaPredicted RBP22.87■■□□□ 1.25
PDLIM5-205ENST00000380180 RILPL1Q5EBL4 403 aa22.87■■□□□ 1.25
PDLIM5-205ENST00000380180 ZFPM1Q8IX07 1006 aa22.87■■□□□ 1.25
PDLIM5-205ENST00000380180 FMR1NBQ8N0W7 255 aaPredicted RBP22.87■■□□□ 1.25
PDLIM5-205ENST00000380180 PPP1R9BQ96SB3 815 aa22.87■■□□□ 1.25
PDLIM5-205ENST00000380180 SERPINA10Q9UK55 444 aa22.87■■□□□ 1.25
PDLIM5-205ENST00000380180 KINO60870 393 aaKnown RBP22.86■■□□□ 1.25
PDLIM5-205ENST00000380180 KRT2P35908 639 aa22.86■■□□□ 1.25
PDLIM5-205ENST00000380180 NDUFA8P51970 172 aa22.86■■□□□ 1.25
PDLIM5-205ENST00000380180 CACNB3P54284 484 aa22.86■■□□□ 1.25
PDLIM5-205ENST00000380180 JMYQ8N9B5 988 aa22.86■■□□□ 1.25
PDLIM5-205ENST00000380180 PSMD1Q99460 953 aa22.86■■□□□ 1.25
PDLIM5-205ENST00000380180 CABP5Q9NP86 173 aa22.86■■□□□ 1.25
PDLIM5-205ENST00000380180 EIF4ENIF1Q9NRA8 985 aaKnown RBP22.86■■□□□ 1.25
PDLIM5-205ENST00000380180 PALM3A6NDB9 673 aaPredicted RBP22.86■■□□□ 1.25
PDLIM5-205ENST00000380180 NOVP48745 357 aa22.86■■□□□ 1.25
PDLIM5-205ENST00000380180 TYRO3Q06418 890 aa22.86■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms