RNA–Protein interactions for RNA: ENST00000379792.6

HERPUD1-203, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 5 BASIC

Gene HERPUD1, Length 1,782 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-203ENST00000379792 K7ELQ4 463 aaPredicted RBP16.56■□□□□ 0.24
HERPUD1-203ENST00000379792 INPP5BP32019 993 aa16.56■□□□□ 0.24
HERPUD1-203ENST00000379792 GUCY1A2P33402 732 aa16.56■□□□□ 0.24
HERPUD1-203ENST00000379792 CAP2P40123 477 aa16.56■□□□□ 0.24
HERPUD1-203ENST00000379792 ATP2B2Q01814 1243 aa16.56■□□□□ 0.24
HERPUD1-203ENST00000379792 IFIT1BQ5T764 474 aaKnown RBP16.56■□□□□ 0.24
HERPUD1-203ENST00000379792 CHMP4CQ96CF2 233 aa16.56■□□□□ 0.24
HERPUD1-203ENST00000379792 HOOK2Q96ED9 719 aa16.56■□□□□ 0.24
HERPUD1-203ENST00000379792 TMX3Q96JJ7 454 aa16.56■□□□□ 0.24
HERPUD1-203ENST00000379792 MYL10Q9BUA6 226 aa16.56■□□□□ 0.24
HERPUD1-203ENST00000379792 ZNF341Q9BYN7 854 aa16.56■□□□□ 0.24
HERPUD1-203ENST00000379792 CREBZFQ9NS37 354 aa16.56■□□□□ 0.24
HERPUD1-203ENST00000379792 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.56■□□□□ 0.24
HERPUD1-203ENST00000379792 STX8Q9UNK0 236 aa16.56■□□□□ 0.24
HERPUD1-203ENST00000379792 IGKV6D-41A0A0C4DH26 115 aa16.55■□□□□ 0.24
HERPUD1-203ENST00000379792 CCDC69A6NI79 296 aa16.55■□□□□ 0.24
HERPUD1-203ENST00000379792 DTNBO60941 627 aa16.55■□□□□ 0.24
HERPUD1-203ENST00000379792 MCM2P49736 904 aa16.55■□□□□ 0.24
HERPUD1-203ENST00000379792 BECN1Q14457 450 aa16.55■□□□□ 0.24
HERPUD1-203ENST00000379792 ME3Q16798 604 aa16.55■□□□□ 0.24
HERPUD1-203ENST00000379792 CCDC84Q86UT8 332 aaPredicted RBP16.55■□□□□ 0.24
HERPUD1-203ENST00000379792 FBXL16Q8N461 479 aa16.55■□□□□ 0.24
HERPUD1-203ENST00000379792 NECAB1Q8N987 351 aa16.55■□□□□ 0.24
HERPUD1-203ENST00000379792 SPRYD3Q8NCJ5 442 aa16.55■□□□□ 0.24
HERPUD1-203ENST00000379792 WRNIP1Q96S55 665 aa16.55■□□□□ 0.24
HERPUD1-203ENST00000379792 CABP5Q9NP86 173 aa16.55■□□□□ 0.24
HERPUD1-203ENST00000379792 MTMR4Q9NYA4 1195 aa16.55■□□□□ 0.24
HERPUD1-203ENST00000379792 USP2O75604 605 aaPredicted RBP16.54■□□□□ 0.24
HERPUD1-203ENST00000379792 RXRAP19793 462 aa16.54■□□□□ 0.24
HERPUD1-203ENST00000379792 LIFRP42702 1097 aa16.54■□□□□ 0.24
HERPUD1-203ENST00000379792 TMEM179Q6ZVK1 233 aa16.54■□□□□ 0.24
HERPUD1-203ENST00000379792 MOB2Q70IA6 237 aa16.54■□□□□ 0.24
HERPUD1-203ENST00000379792 ZKSCAN4Q969J2 545 aaPredicted RBP16.54■□□□□ 0.24
HERPUD1-203ENST00000379792 MTA3Q9BTC8 594 aa16.54■□□□□ 0.24
HERPUD1-203ENST00000379792 ZNF408Q9H9D4 720 aa16.54■□□□□ 0.24
HERPUD1-203ENST00000379792 CLIP2Q9UDT6 1046 aa16.54■□□□□ 0.24
HERPUD1-203ENST00000379792 ZBTB21Q9ULJ3 1066 aa16.54■□□□□ 0.24
HERPUD1-203ENST00000379792 PLIN4Q96Q06 1357 aa16.54■□□□□ 0.24
HERPUD1-203ENST00000379792 PDIA3P30101 505 aaKnown RBP16.54■□□□□ 0.24
HERPUD1-203ENST00000379792 NT5C2P49902 561 aa16.54■□□□□ 0.24
HERPUD1-203ENST00000379792 HTRA3P83110 453 aa16.54■□□□□ 0.24
HERPUD1-203ENST00000379792 CCDC144CPQ8IYA2 1237 aa16.54■□□□□ 0.24
HERPUD1-203ENST00000379792 IL27Q8NEV9 243 aa16.54■□□□□ 0.24
HERPUD1-203ENST00000379792 TMEM47Q9BQJ4 181 aa16.54■□□□□ 0.24
HERPUD1-203ENST00000379792 FOXD4L1Q9NU39 408 aa16.54■□□□□ 0.24
HERPUD1-203ENST00000379792 ZNF112Q9UJU3 913 aa16.54■□□□□ 0.24
HERPUD1-203ENST00000379792 MTMR7Q9Y216 660 aa16.54■□□□□ 0.24
HERPUD1-203ENST00000379792 GOLGA8BA8MQT2 603 aa16.53■□□□□ 0.24
HERPUD1-203ENST00000379792 NF2P35240 595 aa16.53■□□□□ 0.24
HERPUD1-203ENST00000379792 CCT2P78371 535 aaKnown RBP16.53■□□□□ 0.24
HERPUD1-203ENST00000379792 TTLL12Q14166 644 aaPredicted RBP16.53■□□□□ 0.24
HERPUD1-203ENST00000379792 CCDC178Q5BJE1 867 aa16.53■□□□□ 0.24
HERPUD1-203ENST00000379792 APOA5Q6Q788 366 aa16.53■□□□□ 0.24
HERPUD1-203ENST00000379792 SGMS1Q86VZ5 419 aa16.53■□□□□ 0.24
HERPUD1-203ENST00000379792 DGKHQ86XP1 1220 aa16.53■□□□□ 0.24
HERPUD1-203ENST00000379792 SIAH1Q8IUQ4 282 aa16.53■□□□□ 0.24
HERPUD1-203ENST00000379792 TMTC2Q8N394 836 aa16.53■□□□□ 0.24
HERPUD1-203ENST00000379792 ANKS1AQ92625 1134 aa16.53■□□□□ 0.24
HERPUD1-203ENST00000379792 KLRG1Q96E93 195 aa16.53■□□□□ 0.24
HERPUD1-203ENST00000379792 KAT14Q9H8E8 782 aa16.53■□□□□ 0.24
HERPUD1-203ENST00000379792 SLC12A7Q9Y666 1083 aa16.53■□□□□ 0.24
HERPUD1-203ENST00000379792 MYH8P13535 1937 aa16.52■□□□□ 0.24
HERPUD1-203ENST00000379792 TMEM88BA6NKF7 163 aa16.52■□□□□ 0.24
HERPUD1-203ENST00000379792 CTNND1O60716 968 aaKnown RBP16.52■□□□□ 0.24
HERPUD1-203ENST00000379792 EEF2P13639 858 aaKnown RBP16.52■□□□□ 0.24
HERPUD1-203ENST00000379792 EVCP57679 992 aa16.52■□□□□ 0.24
HERPUD1-203ENST00000379792 ICA1Q05084 483 aa16.52■□□□□ 0.24
HERPUD1-203ENST00000379792 MICU3Q86XE3 530 aa16.52■□□□□ 0.24
HERPUD1-203ENST00000379792 ZNF654Q8IZM8 581 aa16.52■□□□□ 0.24
HERPUD1-203ENST00000379792 LRRC47Q8N1G4 583 aaKnown RBP16.52■□□□□ 0.24
HERPUD1-203ENST00000379792 ZSCAN31Q96LW9 406 aaPredicted RBP16.52■□□□□ 0.24
HERPUD1-203ENST00000379792 KANSL2Q9H9L4 492 aa16.52■□□□□ 0.24
HERPUD1-203ENST00000379792 NCOA5Q9HCD5 579 aaKnown RBP16.52■□□□□ 0.24
HERPUD1-203ENST00000379792 HPS5Q9UPZ3 1129 aa16.52■□□□□ 0.24
HERPUD1-203ENST00000379792 PPP1R12BO60237 982 aaPredicted RBP16.51■□□□□ 0.23
HERPUD1-203ENST00000379792 TTLL1O95922 423 aa16.51■□□□□ 0.23
HERPUD1-203ENST00000379792 SYNE3Q6ZMZ3 975 aa16.51■□□□□ 0.23
HERPUD1-203ENST00000379792 CCDC83Q8IWF9 413 aa16.51■□□□□ 0.23
HERPUD1-203ENST00000379792 NUP133Q8WUM0 1156 aa16.51■□□□□ 0.23
HERPUD1-203ENST00000379792 ZNF274Q96GC6 653 aaPredicted RBP16.51■□□□□ 0.23
HERPUD1-203ENST00000379792 IPO9Q96P70 1041 aaKnown RBP16.51■□□□□ 0.23
HERPUD1-203ENST00000379792 SLKQ9H2G2 1235 aaPredicted RBP16.51■□□□□ 0.23
HERPUD1-203ENST00000379792 ZBTB43O43298 467 aa16.51■□□□□ 0.23
HERPUD1-203ENST00000379792 ASNSP08243 561 aa16.51■□□□□ 0.23
HERPUD1-203ENST00000379792 TOP1P11387 765 aaKnown RBP16.51■□□□□ 0.23
HERPUD1-203ENST00000379792 NOVP48745 357 aa16.51■□□□□ 0.23
HERPUD1-203ENST00000379792 ST3GAL1Q11201 340 aa16.51■□□□□ 0.23
HERPUD1-203ENST00000379792 RASGRP2Q7LDG7 609 aa16.51■□□□□ 0.23
HERPUD1-203ENST00000379792 CATIPQ7Z7H3 387 aa16.51■□□□□ 0.23
HERPUD1-203ENST00000379792 PNMA1Q8ND90 353 aa16.51■□□□□ 0.23
HERPUD1-203ENST00000379792 DAXXQ9UER7 740 aaPredicted RBP16.51■□□□□ 0.23
HERPUD1-203ENST00000379792 PFKFB2O60825 505 aa16.5■□□□□ 0.23
HERPUD1-203ENST00000379792 MAP3K9P80192 1104 aa16.5■□□□□ 0.23
HERPUD1-203ENST00000379792 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.5■□□□□ 0.23
HERPUD1-203ENST00000379792 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.5■□□□□ 0.231e-12■■■□□ 16.3
HERPUD1-203ENST00000379792 ACER1Q8TDN7 264 aa16.5■□□□□ 0.23
HERPUD1-203ENST00000379792 SH2B1Q9NRF2 756 aaPredicted RBP16.5■□□□□ 0.23
HERPUD1-203ENST00000379792 A0A1W2PRG0 241 aa16.49■□□□□ 0.23
HERPUD1-203ENST00000379792 UBE2Q2LH0YL09 131 aa16.49■□□□□ 0.23
HERPUD1-203ENST00000379792 RAD21O60216 631 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms