RNA–Protein interactions for RNA: ENST00000379446.9

NEDD9-202, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NEDD9, Length 4,536 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-202ENST00000379446 TCP11L1Q9NUJ3 509 aa7.43□□□□□ -1.22
NEDD9-202ENST00000379446 SHPRHQ149N8 1683 aa7.43□□□□□ -1.22
NEDD9-202ENST00000379446 EIF4E1BA6NMX2 242 aaKnown RBP7.43□□□□□ -1.22
NEDD9-202ENST00000379446 NBPF7P0C2Y1 421 aaPredicted RBP7.43□□□□□ -1.22
NEDD9-202ENST00000379446 CHMLP26374 656 aa7.43□□□□□ -1.22
NEDD9-202ENST00000379446 TBC1D16Q8TBP0 767 aa7.43□□□□□ -1.22
NEDD9-202ENST00000379446 MAGEC2Q9UBF1 373 aaPredicted RBP7.43□□□□□ -1.22
NEDD9-202ENST00000379446 AGLP35573 1532 aa7.43□□□□□ -1.22
NEDD9-202ENST00000379446 CPSF1Q10570 1443 aaKnown RBP7.43□□□□□ -1.22
NEDD9-202ENST00000379446 NEXMIFQ5QGS0 1516 aa7.43□□□□□ -1.22
NEDD9-202ENST00000379446 SNAP23O00161 211 aa7.43□□□□□ -1.22
NEDD9-202ENST00000379446 POTEJP0CG39 1038 aa7.43□□□□□ -1.22
NEDD9-202ENST00000379446 STIM1Q13586 685 aa7.43□□□□□ -1.22
NEDD9-202ENST00000379446 FAM47AQ5JRC9 791 aa7.43□□□□□ -1.22
NEDD9-202ENST00000379446 CCDC181Q5TID7 509 aa7.43□□□□□ -1.22
NEDD9-202ENST00000379446 MAEAQ7L5Y9 396 aa7.43□□□□□ -1.22
NEDD9-202ENST00000379446 SESTD1Q86VW0 696 aa7.43□□□□□ -1.22
NEDD9-202ENST00000379446 MMP19Q99542 508 aa7.43□□□□□ -1.22
NEDD9-202ENST00000379446 PPP1R12CQ9BZL4 782 aa7.43□□□□□ -1.22
NEDD9-202ENST00000379446 TMEM39AQ9NV64 488 aa7.43□□□□□ -1.22
NEDD9-202ENST00000379446 TMEM63CQ9P1W3 806 aa7.43□□□□□ -1.22
NEDD9-202ENST00000379446 NOL12Q9UGY1 213 aaKnown RBP eCLIP7.43□□□□□ -1.225e-7■■■□□ 17.2
NEDD9-202ENST00000379446 ZMYND8Q9ULU4 1186 aaPredicted RBP7.43□□□□□ -1.22
NEDD9-202ENST00000379446 V9GYY5 206 aaPredicted RBP7.43□□□□□ -1.22
NEDD9-202ENST00000379446 DISP2A7MBM2 1401 aa7.42□□□□□ -1.22
NEDD9-202ENST00000379446 DPYSL4O14531 572 aa7.42□□□□□ -1.22
NEDD9-202ENST00000379446 ZAP70P43403 619 aa7.42□□□□□ -1.22
NEDD9-202ENST00000379446 ATP8B2P98198 1209 aa7.42□□□□□ -1.22
NEDD9-202ENST00000379446 GUCY1B3Q02153 619 aa7.42□□□□□ -1.22
NEDD9-202ENST00000379446 ANKRD1Q15327 319 aa7.42□□□□□ -1.22
NEDD9-202ENST00000379446 CCDC102BQ68D86 513 aa7.42□□□□□ -1.22
NEDD9-202ENST00000379446 RUFY4Q6ZNE9 571 aa7.42□□□□□ -1.22
NEDD9-202ENST00000379446 CCDC155Q8N6L0 562 aa7.42□□□□□ -1.22
NEDD9-202ENST00000379446 PPP1R16BQ96T49 567 aa7.42□□□□□ -1.22
NEDD9-202ENST00000379446 PDGFDQ9GZP0 370 aaPredicted RBP7.42□□□□□ -1.22
NEDD9-202ENST00000379446 BSDC1Q9NW68 430 aaPredicted RBP7.42□□□□□ -1.22
NEDD9-202ENST00000379446 PDE8BO95263 885 aa7.42□□□□□ -1.22
NEDD9-202ENST00000379446 USP8P40818 1118 aa7.42□□□□□ -1.22
NEDD9-202ENST00000379446 HMGN5P82970 282 aaKnown RBP7.42□□□□□ -1.22
NEDD9-202ENST00000379446 SKIDA1Q1XH10 827 aa7.42□□□□□ -1.22
NEDD9-202ENST00000379446 TCERG1LQ5VWI1 586 aa7.42□□□□□ -1.22
NEDD9-202ENST00000379446 MYOCDQ8IZQ8 938 aa7.42□□□□□ -1.22
NEDD9-202ENST00000379446 GPT2Q8TD30 523 aa7.42□□□□□ -1.22
NEDD9-202ENST00000379446 CCDC17Q96LX7 622 aa7.42□□□□□ -1.22
NEDD9-202ENST00000379446 TCEANC2Q96MN5 208 aa7.42□□□□□ -1.22
NEDD9-202ENST00000379446 SENP6Q9GZR1 1112 aaPredicted RBP7.42□□□□□ -1.22
NEDD9-202ENST00000379446 AKT3Q9Y243 479 aa7.42□□□□□ -1.22
NEDD9-202ENST00000379446 INPP5FQ9Y2H2 1132 aa7.42□□□□□ -1.22
NEDD9-202ENST00000379446 CCDC169A6NNP5 214 aa7.42□□□□□ -1.22
NEDD9-202ENST00000379446 DYNC1LI2O43237 492 aaPredicted RBP7.42□□□□□ -1.22
NEDD9-202ENST00000379446 METAP2P50579 478 aaKnown RBP eCLIP7.42□□□□□ -1.22
NEDD9-202ENST00000379446 MXD3Q9BW11 206 aa7.42□□□□□ -1.22
NEDD9-202ENST00000379446 UBE2OQ9C0C9 1292 aaKnown RBP7.42□□□□□ -1.22
NEDD9-202ENST00000379446 BABAM1Q9NWV8 329 aa7.42□□□□□ -1.22
NEDD9-202ENST00000379446 PSMD2Q13200 908 aa7.42□□□□□ -1.22
NEDD9-202ENST00000379446 LRRC24Q50LG9 513 aa7.42□□□□□ -1.22
NEDD9-202ENST00000379446 STXBP4Q6ZWJ1 553 aa7.42□□□□□ -1.22
NEDD9-202ENST00000379446 MCF2L2Q86YR7 1114 aa7.42□□□□□ -1.22
NEDD9-202ENST00000379446 FOXP4Q8IVH2 680 aaPredicted RBP7.42□□□□□ -1.22
NEDD9-202ENST00000379446 GPRC5AQ8NFJ5 357 aa7.42□□□□□ -1.22
NEDD9-202ENST00000379446 SDR42E1Q8WUS8 393 aa7.42□□□□□ -1.22
NEDD9-202ENST00000379446 MMRN2Q9H8L6 949 aa7.42□□□□□ -1.22
NEDD9-202ENST00000379446 ZNF215Q9UL58 517 aaPredicted RBP7.42□□□□□ -1.22
NEDD9-202ENST00000379446 MRPL11Q9Y3B7 192 aaKnown RBP7.42□□□□□ -1.22
NEDD9-202ENST00000379446 ZSCAN21Q9Y5A6 473 aaPredicted RBP7.42□□□□□ -1.22
NEDD9-202ENST00000379446 PCDHA1Q9Y5I3 950 aa7.42□□□□□ -1.22
NEDD9-202ENST00000379446 ATP7BP35670 1465 aa7.41□□□□□ -1.22
NEDD9-202ENST00000379446 GOLGA6L19H0YKK7 550 aa7.41□□□□□ -1.22
NEDD9-202ENST00000379446 RNF113AO15541 343 aaKnown RBP7.41□□□□□ -1.22
NEDD9-202ENST00000379446 GADD45BO75293 160 aaPredicted RBP7.41□□□□□ -1.22
NEDD9-202ENST00000379446 ATXN8OSP0DMR3 200 aa7.41□□□□□ -1.22
NEDD9-202ENST00000379446 UBA7P41226 1012 aa7.41□□□□□ -1.22
NEDD9-202ENST00000379446 PHKA1P46020 1223 aa7.41□□□□□ -1.22
NEDD9-202ENST00000379446 STRIP1Q5VSL9 837 aa7.41□□□□□ -1.22
NEDD9-202ENST00000379446 TMTC2Q8N394 836 aa7.41□□□□□ -1.22
NEDD9-202ENST00000379446 RBM46Q8TBY0 533 aaKnown RBP7.41□□□□□ -1.22
NEDD9-202ENST00000379446 CDCA5Q96FF9 252 aa7.41□□□□□ -1.22
NEDD9-202ENST00000379446 CALML4Q96GE6 196 aa7.41□□□□□ -1.22
NEDD9-202ENST00000379446 DEFB118Q96PH6 123 aa7.41□□□□□ -1.22
NEDD9-202ENST00000379446 PUS3Q9BZE2 481 aaKnown RBP7.41□□□□□ -1.22
NEDD9-202ENST00000379446 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP7.41□□□□□ -1.22
NEDD9-202ENST00000379446 UBN2Q6ZU65 1347 aa7.41□□□□□ -1.22
NEDD9-202ENST00000379446 NCOA3Q9Y6Q9 1424 aa7.41□□□□□ -1.22
NEDD9-202ENST00000379446 RGS2P41220 211 aa7.41□□□□□ -1.22
NEDD9-202ENST00000379446 INHBEP58166 350 aa7.41□□□□□ -1.22
NEDD9-202ENST00000379446 RTN1Q16799 776 aa7.41□□□□□ -1.22
NEDD9-202ENST00000379446 NECAB2Q7Z6G3 386 aa7.41□□□□□ -1.22
NEDD9-202ENST00000379446 OPTNQ96CV9 577 aa7.41□□□□□ -1.22
NEDD9-202ENST00000379446 IMPG2Q9BZV3 1241 aa7.41□□□□□ -1.22
NEDD9-202ENST00000379446 TAF1DQ9H5J8 278 aaPredicted RBP7.41□□□□□ -1.22
NEDD9-202ENST00000379446 PDRG1Q9NUG6 133 aa7.41□□□□□ -1.22
NEDD9-202ENST00000379446 PNMA2Q9UL42 364 aa7.41□□□□□ -1.22
NEDD9-202ENST00000379446 MINPP1Q9UNW1 487 aa7.41□□□□□ -1.22
NEDD9-202ENST00000379446 FRMPD2Q68DX3 1309 aaPredicted RBP7.41□□□□□ -1.22
NEDD9-202ENST00000379446 MST1RQ04912 1400 aa7.41□□□□□ -1.22
NEDD9-202ENST00000379446 COL3A1P02461 1466 aaPredicted RBP7.41□□□□□ -1.22
NEDD9-202ENST00000379446 DENND3A2RUS2 1198 aa7.41□□□□□ -1.22
NEDD9-202ENST00000379446 M0R2C6 588 aa7.41□□□□□ -1.22
NEDD9-202ENST00000379446 ZBTB43O43298 467 aa7.41□□□□□ -1.22
NEDD9-202ENST00000379446 ADCY3O60266 1144 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms