RNA–Protein interactions for RNA: ENST00000379018.7

PDLIM4-202, Transcript of PDZ and LIM domain 4, humanhuman

TSL 1 (best) BASIC

Gene PDLIM4, Length 1,006 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-202ENST00000379018 TMEM57Q8N5G2 664 aa21.73■■□□□ 1.07
PDLIM4-202ENST00000379018 SENP6Q9GZR1 1112 aaPredicted RBP21.73■■□□□ 1.07
PDLIM4-202ENST00000379018 CCDC8Q9H0W5 538 aaPredicted RBP21.73■■□□□ 1.07
PDLIM4-202ENST00000379018 TLR7Q9NYK1 1049 aaKnown RBP21.73■■□□□ 1.07
PDLIM4-202ENST00000379018 STXBP5LQ9Y2K9 1186 aa21.73■■□□□ 1.07
PDLIM4-202ENST00000379018 CNMDO75829 334 aa21.72■■□□□ 1.07
PDLIM4-202ENST00000379018 CCNA1P78396 465 aa21.72■■□□□ 1.07
PDLIM4-202ENST00000379018 EDC3Q96F86 508 aaKnown RBP21.72■■□□□ 1.07
PDLIM4-202ENST00000379018 GPR108Q9NPR9 543 aa21.72■■□□□ 1.07
PDLIM4-202ENST00000379018 FLRT1Q9NZU1 646 aa21.72■■□□□ 1.07
PDLIM4-202ENST00000379018 RABGAP1Q9Y3P9 1069 aa21.72■■□□□ 1.07
PDLIM4-202ENST00000379018 CUL9Q8IWT3 2517 aa21.72■■□□□ 1.07
PDLIM4-202ENST00000379018 USP17L15C9J2P7 530 aa21.71■■□□□ 1.07
PDLIM4-202ENST00000379018 USP17L13C9JLJ4 530 aa21.71■■□□□ 1.07
PDLIM4-202ENST00000379018 USP17L11C9JVI0 530 aa21.71■■□□□ 1.07
PDLIM4-202ENST00000379018 USP17L18D6R9N7 530 aa21.71■■□□□ 1.07
PDLIM4-202ENST00000379018 USP17L22D6RA61 530 aa21.71■■□□□ 1.07
PDLIM4-202ENST00000379018 USP17L17D6RBQ6 530 aa21.71■■□□□ 1.07
PDLIM4-202ENST00000379018 USP17L19D6RCP7 530 aa21.71■■□□□ 1.07
PDLIM4-202ENST00000379018 USP17L20D6RJB6 530 aa21.71■■□□□ 1.07
PDLIM4-202ENST00000379018 GLRX3O76003 335 aaKnown RBP21.71■■□□□ 1.07
PDLIM4-202ENST00000379018 USP17L24Q0WX57 530 aa21.71■■□□□ 1.07
PDLIM4-202ENST00000379018 MAGEB6Q8N7X4 407 aa21.71■■□□□ 1.07
PDLIM4-202ENST00000379018 FAM161BQ96MY7 647 aa21.71■■□□□ 1.07
PDLIM4-202ENST00000379018 IVNS1ABPQ9Y6Y0 642 aa21.71■■□□□ 1.07
PDLIM4-202ENST00000379018 VCAM1P19320 739 aa21.7■■□□□ 1.06
PDLIM4-202ENST00000379018 ATP2B2Q01814 1243 aa21.7■■□□□ 1.06
PDLIM4-202ENST00000379018 POLA2Q14181 598 aa21.7■■□□□ 1.06
PDLIM4-202ENST00000379018 ACER1Q8TDN7 264 aa21.7■■□□□ 1.06
PDLIM4-202ENST00000379018 LBHD1Q9BQE6 289 aaPredicted RBP21.7■■□□□ 1.06
PDLIM4-202ENST00000379018 DBNLQ9UJU6 430 aaKnown RBP21.7■■□□□ 1.06
PDLIM4-202ENST00000379018 ABCB5Q2M3G0 1257 aa21.69■■□□□ 1.06
PDLIM4-202ENST00000379018 CERKLQ49MI3 558 aaPredicted RBP21.69■■□□□ 1.06
PDLIM4-202ENST00000379018 SERPINB13Q9UIV8 391 aa21.69■■□□□ 1.06
PDLIM4-202ENST00000379018 MYCNP04198 464 aaPredicted RBP21.68■■□□□ 1.06
PDLIM4-202ENST00000379018 CYP2C19P33261 490 aa21.68■■□□□ 1.06
PDLIM4-202ENST00000379018 USP14P54578 494 aa21.68■■□□□ 1.06
PDLIM4-202ENST00000379018 CATSPERGQ6ZRH7 1159 aa21.68■■□□□ 1.06
PDLIM4-202ENST00000379018 C12orf42Q96LP6 360 aa21.68■■□□□ 1.06
PDLIM4-202ENST00000379018 RPAP3Q9H6T3 665 aaPredicted RBP21.68■■□□□ 1.06
PDLIM4-202ENST00000379018 BTBD7Q9P203 1132 aa21.68■■□□□ 1.06
PDLIM4-202ENST00000379018 DDX20Q9UHI6 824 aaKnown RBP21.68■■□□□ 1.06
PDLIM4-202ENST00000379018 DNAH12Q6ZR08 3092 aa21.68■■□□□ 1.06
PDLIM4-202ENST00000379018 SLC15A5A6NIM6 579 aa21.67■■□□□ 1.06
PDLIM4-202ENST00000379018 PTPREP23469 700 aa21.67■■□□□ 1.06
PDLIM4-202ENST00000379018 ATP8B2P98198 1209 aa21.67■■□□□ 1.06
PDLIM4-202ENST00000379018 NPLOC4Q8TAT6 608 aa21.67■■□□□ 1.06
PDLIM4-202ENST00000379018 SSH3Q8TE77 659 aa21.67■■□□□ 1.06
PDLIM4-202ENST00000379018 CABP5Q9NP86 173 aa21.67■■□□□ 1.06
PDLIM4-202ENST00000379018 PRKAG2Q9UGJ0 569 aa21.67■■□□□ 1.06
PDLIM4-202ENST00000379018 ANO1Q5XXA6 986 aa21.66■■□□□ 1.06
PDLIM4-202ENST00000379018 ZKSCAN2Q63HK3 967 aa21.66■■□□□ 1.06
PDLIM4-202ENST00000379018 TATDN1Q6P1N9 297 aa21.66■■□□□ 1.06
PDLIM4-202ENST00000379018 ANTXR1Q9H6X2 564 aa21.66■■□□□ 1.06
PDLIM4-202ENST00000379018 ATP11BQ9Y2G3 1177 aa21.66■■□□□ 1.06
PDLIM4-202ENST00000379018 SPDYE16A6NNV3 312 aaPredicted RBP21.65■■□□□ 1.06
PDLIM4-202ENST00000379018 MPHOSPH10O00566 681 aaKnown RBP21.65■■□□□ 1.06
PDLIM4-202ENST00000379018 RTP1P59025 263 aa21.65■■□□□ 1.06
PDLIM4-202ENST00000379018 GJC2Q5T442 439 aaPredicted RBP21.65■■□□□ 1.06
PDLIM4-202ENST00000379018 TTC6Q86TZ1 520 aa21.65■■□□□ 1.06
PDLIM4-202ENST00000379018 EAF2Q96CJ1 260 aaPredicted RBP21.65■■□□□ 1.06
PDLIM4-202ENST00000379018 ZNF512BQ96KM6 892 aaPredicted RBP21.65■■□□□ 1.06
PDLIM4-202ENST00000379018 KIAA1683Q9H0B3 1180 aa21.65■■□□□ 1.06
PDLIM4-202ENST00000379018 NAV1Q8NEY1 1877 aa21.64■■□□□ 1.06
PDLIM4-202ENST00000379018 POLR3DP05423 398 aaPredicted RBP21.64■■□□□ 1.05
PDLIM4-202ENST00000379018 PLCD1P51178 756 aa21.64■■□□□ 1.05
PDLIM4-202ENST00000379018 GRB14Q14449 540 aa21.64■■□□□ 1.05
PDLIM4-202ENST00000379018 SAMD1Q6SPF0 538 aaPredicted RBP21.64■■□□□ 1.05
PDLIM4-202ENST00000379018 DPP9Q86TI2 863 aa21.64■■□□□ 1.05
PDLIM4-202ENST00000379018 ITPRIPQ8IWB1 547 aa21.64■■□□□ 1.05
PDLIM4-202ENST00000379018 TRPV1Q8NER1 839 aa21.64■■□□□ 1.05
PDLIM4-202ENST00000379018 LPAR1Q92633 364 aa21.64■■□□□ 1.05
PDLIM4-202ENST00000379018 TANGO6Q9C0B7 1094 aa21.64■■□□□ 1.05
PDLIM4-202ENST00000379018 BCL11AQ9H165 835 aa21.64■■□□□ 1.05
PDLIM4-202ENST00000379018 EHD4Q9H223 541 aa21.64■■□□□ 1.05
PDLIM4-202ENST00000379018 PRDM5Q9NQX1 630 aaPredicted RBP21.64■■□□□ 1.05
PDLIM4-202ENST00000379018 MSCO60682 206 aa21.63■■□□□ 1.05
PDLIM4-202ENST00000379018 SHMT1P34896 483 aa21.63■■□□□ 1.05
PDLIM4-202ENST00000379018 MAP3K12Q12852 859 aa21.63■■□□□ 1.05
PDLIM4-202ENST00000379018 SEPT2Q15019 361 aa21.63■■□□□ 1.05
PDLIM4-202ENST00000379018 FTSJ3Q8IY81 847 aaKnown RBP21.63■■□□□ 1.05
PDLIM4-202ENST00000379018 GUCD1Q96NT3 240 aa21.63■■□□□ 1.05
PDLIM4-202ENST00000379018 CERS3Q8IU89 383 aa21.62■■□□□ 1.05
PDLIM4-202ENST00000379018 DNM1LO00429 736 aa21.61■■□□□ 1.05
PDLIM4-202ENST00000379018 ADORA2AP29274 412 aa21.61■■□□□ 1.05
PDLIM4-202ENST00000379018 GUCY1A2P33402 732 aa21.61■■□□□ 1.05
PDLIM4-202ENST00000379018 EVX2Q03828 476 aa21.61■■□□□ 1.05
PDLIM4-202ENST00000379018 PLS1Q14651 629 aa21.61■■□□□ 1.05
PDLIM4-202ENST00000379018 ZNF697Q5TEC3 545 aa21.61■■□□□ 1.05
PDLIM4-202ENST00000379018 AACSQ86V21 672 aa21.61■■□□□ 1.05
PDLIM4-202ENST00000379018 PHF6Q8IWS0 365 aaKnown RBP eCLIP21.61■■□□□ 1.05
PDLIM4-202ENST00000379018 COL25A1Q9BXS0 654 aaPredicted RBP21.61■■□□□ 1.05
PDLIM4-202ENST00000379018 LAMA2P24043 3122 aaKnown RBP21.61■■□□□ 1.05
PDLIM4-202ENST00000379018 MAGEB6P1A0A0J9YX57 407 aa21.6■■□□□ 1.05
PDLIM4-202ENST00000379018 KBTBD13C9JR72 458 aa21.6■■□□□ 1.05
PDLIM4-202ENST00000379018 HOXC6P09630 235 aa21.6■■□□□ 1.05
PDLIM4-202ENST00000379018 CYBAP13498 195 aa21.6■■□□□ 1.05
PDLIM4-202ENST00000379018 LBX2Q6XYB7 198 aa21.6■■□□□ 1.05
PDLIM4-202ENST00000379018 MOV10L1Q9BXT6 1211 aaKnown RBP21.6■■□□□ 1.05
PDLIM4-202ENST00000379018 EXOC6BQ9Y2D4 811 aa21.6■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms