RNA–Protein interactions for RNA: ENST00000378727.8

THUMPD2-201, Transcript of THUMP domain containing 2, humanhuman

TSL 1 (best)

Gene THUMPD2, Length 2,089 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD2-201ENST00000378727 SIPA1L1O43166 1804 aa20.12■□□□□ 0.81
THUMPD2-201ENST00000378727 TRIM29Q14134 588 aa20.12■□□□□ 0.81
THUMPD2-201ENST00000378727 DALRD3Q5D0E6 543 aaKnown RBP20.12■□□□□ 0.81
THUMPD2-201ENST00000378727 MYSM1Q5VVJ2 828 aa20.12■□□□□ 0.81
THUMPD2-201ENST00000378727 SRBD1Q8N5C6 995 aaKnown RBP20.12■□□□□ 0.81
THUMPD2-201ENST00000378727 VPS33BQ9H267 617 aa20.12■□□□□ 0.81
THUMPD2-201ENST00000378727 CNTNAP5Q8WYK1 1306 aa20.12■□□□□ 0.81
THUMPD2-201ENST00000378727 PSMD14O00487 310 aa20.12■□□□□ 0.81
THUMPD2-201ENST00000378727 PRPF3O43395 683 aaKnown RBP20.12■□□□□ 0.81
THUMPD2-201ENST00000378727 RAD17O75943 681 aa20.12■□□□□ 0.81
THUMPD2-201ENST00000378727 SYAP1Q96A49 352 aaPredicted RBP20.12■□□□□ 0.81
THUMPD2-201ENST00000378727 SHISA4Q96DD7 197 aa20.12■□□□□ 0.81
THUMPD2-201ENST00000378727 TMEM47Q9BQJ4 181 aa20.12■□□□□ 0.81
THUMPD2-201ENST00000378727 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.12■□□□□ 0.81
THUMPD2-201ENST00000378727 IDI2Q9BXS1 227 aa20.12■□□□□ 0.81
THUMPD2-201ENST00000378727 FAM198AQ9UFP1 575 aa20.12■□□□□ 0.81
THUMPD2-201ENST00000378727 SERPINB13Q9UIV8 391 aa20.12■□□□□ 0.81
THUMPD2-201ENST00000378727 ISY1Q9ULR0 285 aaKnown RBP20.12■□□□□ 0.81
THUMPD2-201ENST00000378727 SYCE3A1L190 88 aa20.11■□□□□ 0.81
THUMPD2-201ENST00000378727 VIL1P09327 827 aaKnown RBP20.11■□□□□ 0.81
THUMPD2-201ENST00000378727 U2AF2P26368 475 aaKnown RBP eCLIP20.11■□□□□ 0.814e-6■■■□□ 19.2
THUMPD2-201ENST00000378727 RSBN1LQ6PCB5 846 aaPredicted RBP20.11■□□□□ 0.81
THUMPD2-201ENST00000378727 GMLQ99445 158 aa20.11■□□□□ 0.81
THUMPD2-201ENST00000378727 PPP1R1BQ9UD71 204 aaPredicted RBP20.11■□□□□ 0.81
THUMPD2-201ENST00000378727 STX8Q9UNK0 236 aa20.11■□□□□ 0.81
THUMPD2-201ENST00000378727 V9GY48 417 aaPredicted RBP20.11■□□□□ 0.81
THUMPD2-201ENST00000378727 PLIN4Q96Q06 1357 aa20.11■□□□□ 0.81
THUMPD2-201ENST00000378727 BAZ2BQ9UIF8 2168 aaKnown RBP20.11■□□□□ 0.81
THUMPD2-201ENST00000378727 hCG_1642624A0A1W2PR95 340 aa20.11■□□□□ 0.81
THUMPD2-201ENST00000378727 MMP1P03956 469 aa20.11■□□□□ 0.81
THUMPD2-201ENST00000378727 CFAP100Q494V2 611 aa20.11■□□□□ 0.81
THUMPD2-201ENST00000378727 MAP3K14Q99558 947 aa20.11■□□□□ 0.81
THUMPD2-201ENST00000378727 RTEL1Q9NZ71 1219 aa20.11■□□□□ 0.81
THUMPD2-201ENST00000378727 KCNJ14Q9UNX9 436 aa20.11■□□□□ 0.81
THUMPD2-201ENST00000378727 NOVP48745 357 aa20.1■□□□□ 0.81
THUMPD2-201ENST00000378727 CEP95Q96GE4 821 aa20.1■□□□□ 0.81
THUMPD2-201ENST00000378727 MYO3BQ8WXR4 1341 aa20.1■□□□□ 0.81
THUMPD2-201ENST00000378727 PSDA5PKW4 1024 aaPredicted RBP20.09■□□□□ 0.81
THUMPD2-201ENST00000378727 LIG1P18858 919 aa20.09■□□□□ 0.81
THUMPD2-201ENST00000378727 SHMT1P34896 483 aa20.09■□□□□ 0.81
THUMPD2-201ENST00000378727 AKAP17AQ02040 695 aaKnown RBP20.09■□□□□ 0.81
THUMPD2-201ENST00000378727 TCP10Q12799 353 aa20.09■□□□□ 0.81
THUMPD2-201ENST00000378727 GRM4Q14833 912 aa20.09■□□□□ 0.81
THUMPD2-201ENST00000378727 PRMT6Q96LA8 375 aaPredicted RBP20.09■□□□□ 0.81
THUMPD2-201ENST00000378727 TDRD3Q9H7E2 651 aaKnown RBP20.09■□□□□ 0.81
THUMPD2-201ENST00000378727 SWAP70Q9UH65 585 aa20.09■□□□□ 0.81
THUMPD2-201ENST00000378727 CLIC4Q9Y696 253 aa20.09■□□□□ 0.81
THUMPD2-201ENST00000378727 NPM3O75607 178 aaKnown RBP20.09■□□□□ 0.81
THUMPD2-201ENST00000378727 SLURP2P0DP57 97 aa20.09■□□□□ 0.81
THUMPD2-201ENST00000378727 AKR1B1P15121 316 aa20.09■□□□□ 0.81
THUMPD2-201ENST00000378727 KIF5BP33176 963 aa20.09■□□□□ 0.81
THUMPD2-201ENST00000378727 PTGER2P43116 358 aa20.09■□□□□ 0.81
THUMPD2-201ENST00000378727 CCDC183Q5T5S1 534 aa20.09■□□□□ 0.81
THUMPD2-201ENST00000378727 L1TD1Q5T7N2 865 aaKnown RBP20.09■□□□□ 0.81
THUMPD2-201ENST00000378727 SH3BP5LQ7L8J4 393 aa20.09■□□□□ 0.81
THUMPD2-201ENST00000378727 STAG2Q8N3U4 1231 aa20.09■□□□□ 0.81
THUMPD2-201ENST00000378727 EHD4Q9H223 541 aa20.09■□□□□ 0.81
THUMPD2-201ENST00000378727 POLR3EQ9NVU0 708 aa20.09■□□□□ 0.81
THUMPD2-201ENST00000378727 ZNRF3Q9ULT6 936 aa20.09■□□□□ 0.81
THUMPD2-201ENST00000378727 GOLGA6L4A6NEF3 574 aa20.08■□□□□ 0.81
THUMPD2-201ENST00000378727 DDTLA6NHG4 134 aaPredicted RBP20.08■□□□□ 0.81
THUMPD2-201ENST00000378727 HLA-DOAP06340 250 aa20.08■□□□□ 0.81
THUMPD2-201ENST00000378727 MAD2L2Q9UI95 211 aa20.08■□□□□ 0.81
THUMPD2-201ENST00000378727 CD2APQ9Y5K6 639 aa20.08■□□□□ 0.81
THUMPD2-201ENST00000378727 GREB1LQ9C091 1923 aaPredicted RBP20.08■□□□□ 0.8
THUMPD2-201ENST00000378727 BTBD18B2RXH4 712 aa20.07■□□□□ 0.8
THUMPD2-201ENST00000378727 XRCC6P12956 609 aaKnown RBP eCLIP20.07■□□□□ 0.8
THUMPD2-201ENST00000378727 LRSAM1Q6UWE0 723 aa20.07■□□□□ 0.8
THUMPD2-201ENST00000378727 NIM1KQ8IY84 436 aa20.07■□□□□ 0.8
THUMPD2-201ENST00000378727 DIS3L2Q8IYB7 885 aaKnown RBP20.07■□□□□ 0.8
THUMPD2-201ENST00000378727 LINC00301Q8NCQ3 95 aa20.07■□□□□ 0.8
THUMPD2-201ENST00000378727 DNAJC18Q9H819 358 aa20.07■□□□□ 0.8
THUMPD2-201ENST00000378727 GRPEL1Q9HAV7 217 aa20.07■□□□□ 0.8
THUMPD2-201ENST00000378727 ZBTB12Q9Y330 459 aaPredicted RBP20.07■□□□□ 0.8
THUMPD2-201ENST00000378727 IGKV6D-41A0A0C4DH26 115 aa20.07■□□□□ 0.8
THUMPD2-201ENST00000378727 NASPP49321 788 aaPredicted RBP20.07■□□□□ 0.8
THUMPD2-201ENST00000378727 GNL2Q13823 731 aaKnown RBP20.07■□□□□ 0.8
THUMPD2-201ENST00000378727 RASGRP2Q7LDG7 609 aa20.07■□□□□ 0.8
THUMPD2-201ENST00000378727 KLHL34Q8N239 644 aa20.07■□□□□ 0.8
THUMPD2-201ENST00000378727 DHX36Q9H2U1 1008 aaKnown RBP20.07■□□□□ 0.8
THUMPD2-201ENST00000378727 VPS54Q9P1Q0 977 aa20.07■□□□□ 0.8
THUMPD2-201ENST00000378727 NFKBIEO00221 500 aa20.06■□□□□ 0.8
THUMPD2-201ENST00000378727 MRE11P49959 708 aa20.06■□□□□ 0.8
THUMPD2-201ENST00000378727 SLC35G1Q2M3R5 365 aa20.06■□□□□ 0.8
THUMPD2-201ENST00000378727 TAOK3Q9H2K8 898 aa20.06■□□□□ 0.8
THUMPD2-201ENST00000378727 MTMR4Q9NYA4 1195 aa20.06■□□□□ 0.8
THUMPD2-201ENST00000378727 YEATS4O95619 227 aa20.06■□□□□ 0.8
THUMPD2-201ENST00000378727 TOP1P11387 765 aaKnown RBP20.06■□□□□ 0.8
THUMPD2-201ENST00000378727 ANO1Q5XXA6 986 aa20.06■□□□□ 0.8
THUMPD2-201ENST00000378727 NOSTRINQ8IVI9 506 aa20.06■□□□□ 0.8
THUMPD2-201ENST00000378727 OXER1Q8TDS5 423 aa20.06■□□□□ 0.8
THUMPD2-201ENST00000378727 PHF20Q9BVI0 1012 aa20.06■□□□□ 0.8
THUMPD2-201ENST00000378727 PALM3A6NDB9 673 aaPredicted RBP20.05■□□□□ 0.8
THUMPD2-201ENST00000378727 SPDYE2BA6NHP3 402 aa20.05■□□□□ 0.8
THUMPD2-201ENST00000378727 SPDYE6P0CI01 402 aa20.05■□□□□ 0.8
THUMPD2-201ENST00000378727 CXCL9Q07325 125 aa20.05■□□□□ 0.8
THUMPD2-201ENST00000378727 SAFBQ15424 915 aaKnown RBP eCLIP20.05■□□□□ 0.8
THUMPD2-201ENST00000378727 FOXP1Q9H334 677 aaPredicted RBP20.05■□□□□ 0.8
THUMPD2-201ENST00000378727 MTMR7Q9Y216 660 aa20.05■□□□□ 0.8
THUMPD2-201ENST00000378727 VEGFAP15692 232 aaPredicted RBP20.04■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms