RNA–Protein interactions for RNA: ENST00000378610.1

CDKAL1-202, Transcript of CDK5 regulatory subunit associated protein 1 like 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CDKAL1, Length 3,115 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKAL1-202ENST00000378610 DEF6Q9H4E7 631 aa7.61□□□□□ -1.19
CDKAL1-202ENST00000378610 TPX2Q9ULW0 747 aaKnown RBP7.61□□□□□ -1.19
CDKAL1-202ENST00000378610 PIK3C2AO00443 1686 aa7.61□□□□□ -1.19
CDKAL1-202ENST00000378610 USP31Q70CQ4 1352 aa7.61□□□□□ -1.19
CDKAL1-202ENST00000378610 SIPA1L3O60292 1781 aaPredicted RBP7.61□□□□□ -1.19
CDKAL1-202ENST00000378610 COL22A1Q8NFW1 1626 aaPredicted RBP7.61□□□□□ -1.19
CDKAL1-202ENST00000378610 LMO7Q8WWI1 1683 aa7.61□□□□□ -1.19
CDKAL1-202ENST00000378610 NWD2Q9ULI1 1742 aa7.61□□□□□ -1.19
CDKAL1-202ENST00000378610 ZSCAN12O43309 604 aa7.61□□□□□ -1.19
CDKAL1-202ENST00000378610 PSMA5P28066 241 aa7.61□□□□□ -1.19
CDKAL1-202ENST00000378610 C1orf131Q8NDD1 294 aaKnown RBP7.61□□□□□ -1.19
CDKAL1-202ENST00000378610 RUFY2Q8WXA3 655 aa7.61□□□□□ -1.19
CDKAL1-202ENST00000378610 AGXT2Q9BYV1 514 aa7.61□□□□□ -1.19
CDKAL1-202ENST00000378610 FAM107BQ9H098 131 aa7.61□□□□□ -1.19
CDKAL1-202ENST00000378610 PDE11AQ9HCR9 933 aa7.61□□□□□ -1.19
CDKAL1-202ENST00000378610 KIAA1468Q9P260 1216 aa7.61□□□□□ -1.19
CDKAL1-202ENST00000378610 PCDHGC3Q9UN70 934 aa7.61□□□□□ -1.19
CDKAL1-202ENST00000378610 SPG7Q9UQ90 795 aa7.61□□□□□ -1.19
CDKAL1-202ENST00000378610 PPP2R2CQ9Y2T4 447 aa7.61□□□□□ -1.19
CDKAL1-202ENST00000378610 FAM237AA0A1B0GTK4 181 aa7.6□□□□□ -1.19
CDKAL1-202ENST00000378610 F6X3S4 739 aa7.6□□□□□ -1.19
CDKAL1-202ENST00000378610 ATP5J2-PTCD1G3V325 749 aa7.6□□□□□ -1.19
CDKAL1-202ENST00000378610 KIF3CO14782 793 aa7.6□□□□□ -1.19
CDKAL1-202ENST00000378610 CUTAO60888 179 aa7.6□□□□□ -1.19
CDKAL1-202ENST00000378610 FBXO45P0C2W1 286 aa7.6□□□□□ -1.19
CDKAL1-202ENST00000378610 ATF4P18848 351 aaPredicted RBP7.6□□□□□ -1.19
CDKAL1-202ENST00000378610 PRPF40BQ6NWY9 871 aaKnown RBP7.6□□□□□ -1.19
CDKAL1-202ENST00000378610 SRGAP1Q7Z6B7 1085 aa7.6□□□□□ -1.19
CDKAL1-202ENST00000378610 MICALL2Q8IY33 904 aa7.6□□□□□ -1.19
CDKAL1-202ENST00000378610 CEP63Q96MT8 703 aa7.6□□□□□ -1.19
CDKAL1-202ENST00000378610 RBCK1Q9BYM8 510 aa7.6□□□□□ -1.19
CDKAL1-202ENST00000378610 TUBE1Q9UJT0 475 aa7.6□□□□□ -1.19
CDKAL1-202ENST00000378610 SUFUQ9UMX1 484 aa7.6□□□□□ -1.19
CDKAL1-202ENST00000378610 SCINQ9Y6U3 715 aa7.6□□□□□ -1.19
CDKAL1-202ENST00000378610 A2ML1A8K2U0 1454 aa7.6□□□□□ -1.19
CDKAL1-202ENST00000378610 SLIT1O75093 1534 aa7.6□□□□□ -1.19
CDKAL1-202ENST00000378610 NRDCO43847 1150 aa7.6□□□□□ -1.19
CDKAL1-202ENST00000378610 GLRX3O76003 335 aaKnown RBP7.6□□□□□ -1.19
CDKAL1-202ENST00000378610 SYF2O95926 243 aaKnown RBP7.6□□□□□ -1.19
CDKAL1-202ENST00000378610 TUBBP07437 444 aa7.6□□□□□ -1.19
CDKAL1-202ENST00000378610 NLRP12P59046 1061 aa7.6□□□□□ -1.19
CDKAL1-202ENST00000378610 DPCR1Q3MIW9 517 aa7.6□□□□□ -1.19
CDKAL1-202ENST00000378610 CCDC30Q5VVM6 783 aa7.6□□□□□ -1.19
CDKAL1-202ENST00000378610 TMC6Q7Z403 805 aa7.6□□□□□ -1.19
CDKAL1-202ENST00000378610 RNF135Q8IUD6 432 aa7.6□□□□□ -1.19
CDKAL1-202ENST00000378610 BICD2Q8TD16 824 aa7.6□□□□□ -1.19
CDKAL1-202ENST00000378610 PNKPQ96T60 521 aa7.6□□□□□ -1.19
CDKAL1-202ENST00000378610 CDK19Q9BWU1 502 aa7.6□□□□□ -1.19
CDKAL1-202ENST00000378610 CABP1Q9NZU7 370 aa7.6□□□□□ -1.19
CDKAL1-202ENST00000378610 IFNKQ9P0W0 207 aa7.6□□□□□ -1.19
CDKAL1-202ENST00000378610 HMG20BQ9P0W2 317 aa7.6□□□□□ -1.19
CDKAL1-202ENST00000378610 RBM8AQ9Y5S9 174 aaKnown RBP7.6□□□□□ -1.19
CDKAL1-202ENST00000378610 GOLGA6L4A6NEF3 574 aa7.59□□□□□ -1.19
CDKAL1-202ENST00000378610 BECN2A8MW95 431 aa7.59□□□□□ -1.19
CDKAL1-202ENST00000378610 STX10O60499 249 aa7.59□□□□□ -1.19
CDKAL1-202ENST00000378610 RGS20O76081 388 aa7.59□□□□□ -1.19
CDKAL1-202ENST00000378610 FOSP01100 380 aaPredicted RBP7.59□□□□□ -1.19
CDKAL1-202ENST00000378610 SF3B2Q13435 895 aaKnown RBP7.59□□□□□ -1.19
CDKAL1-202ENST00000378610 SART3Q15020 963 aaKnown RBP7.59□□□□□ -1.19
CDKAL1-202ENST00000378610 C10orf62Q5T681 223 aaPredicted RBP7.59□□□□□ -1.19
CDKAL1-202ENST00000378610 ADALQ6DHV7 355 aa7.59□□□□□ -1.19
CDKAL1-202ENST00000378610 CWC27Q6UX04 472 aaKnown RBP7.59□□□□□ -1.19
CDKAL1-202ENST00000378610 INTS13Q9NVM9 706 aa7.59□□□□□ -1.19
CDKAL1-202ENST00000378610 BABAM1Q9NWV8 329 aa7.59□□□□□ -1.19
CDKAL1-202ENST00000378610 SPEF2Q9C093 1822 aa7.59□□□□□ -1.19
CDKAL1-202ENST00000378610 BCL9LQ86UU0 1499 aa7.59□□□□□ -1.19
CDKAL1-202ENST00000378610 COL15A1P39059 1388 aa7.59□□□□□ -1.19
CDKAL1-202ENST00000378610 CFAP99D6REC4 459 aa7.59□□□□□ -1.19
CDKAL1-202ENST00000378610 N4BP1O75113 896 aaKnown RBP7.59□□□□□ -1.19
CDKAL1-202ENST00000378610 ALDH1L1O75891 902 aa7.59□□□□□ -1.19
CDKAL1-202ENST00000378610 URI1O94763 535 aaPredicted RBP7.59□□□□□ -1.19
CDKAL1-202ENST00000378610 ATP6V1AP38606 617 aa7.59□□□□□ -1.19
CDKAL1-202ENST00000378610 FNTAP49354 379 aa7.59□□□□□ -1.19
CDKAL1-202ENST00000378610 GUCA2AQ02747 115 aa7.59□□□□□ -1.19
CDKAL1-202ENST00000378610 POU5F1BQ06416 359 aa7.59□□□□□ -1.19
CDKAL1-202ENST00000378610 GET4Q7L5D6 327 aaPredicted RBP7.59□□□□□ -1.19
CDKAL1-202ENST00000378610 ERC1Q8IUD2 1116 aa7.59□□□□□ -1.19
CDKAL1-202ENST00000378610 EGFL6Q8IUX8 553 aa7.59□□□□□ -1.19
CDKAL1-202ENST00000378610 ELOA2Q8IYF1 753 aaPredicted RBP7.59□□□□□ -1.19
CDKAL1-202ENST00000378610 SRA1Q9HD15 236 aaKnown RBP7.59□□□□□ -1.19
CDKAL1-202ENST00000378610 HOMER2Q9NSB8 354 aa7.59□□□□□ -1.19
CDKAL1-202ENST00000378610 RTEL1Q9NZ71 1219 aa7.59□□□□□ -1.19
CDKAL1-202ENST00000378610 VPS18Q9P253 973 aa7.59□□□□□ -1.19
CDKAL1-202ENST00000378610 CHMP3Q9Y3E7 222 aa7.59□□□□□ -1.19
CDKAL1-202ENST00000378610 CARMIL3Q8ND23 1372 aa7.59□□□□□ -1.2
CDKAL1-202ENST00000378610 FBLN1P23142 703 aa7.58□□□□□ -1.2
CDKAL1-202ENST00000378610 COPB2P35606 906 aa7.58□□□□□ -1.2
CDKAL1-202ENST00000378610 CDKN1CP49918 316 aaPredicted RBP7.58□□□□□ -1.2
CDKAL1-202ENST00000378610 LRRC41Q15345 812 aa7.58□□□□□ -1.2
CDKAL1-202ENST00000378610 ZNF654Q8IZM8 581 aa7.58□□□□□ -1.2
CDKAL1-202ENST00000378610 FBXL16Q8N461 479 aa7.58□□□□□ -1.2
CDKAL1-202ENST00000378610 TBC1D22AQ8WUA7 517 aa7.58□□□□□ -1.2
CDKAL1-202ENST00000378610 SYTL4Q96C24 671 aaPredicted RBP7.58□□□□□ -1.2
CDKAL1-202ENST00000378610 DDX11Q96FC9 970 aa7.58□□□□□ -1.2
CDKAL1-202ENST00000378610 NEUROD6Q96NK8 337 aa7.58□□□□□ -1.2
CDKAL1-202ENST00000378610 CYLDQ9NQC7 956 aa7.58□□□□□ -1.2
CDKAL1-202ENST00000378610 RAI14Q9P0K7 980 aa7.58□□□□□ -1.2
CDKAL1-202ENST00000378610 ADAMTS7Q9UKP4 1686 aa7.58□□□□□ -1.2
CDKAL1-202ENST00000378610 CTDNEP1O95476 244 aa7.58□□□□□ -1.2
CDKAL1-202ENST00000378610 FAM163BP0C2L3 166 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms