RNA–Protein interactions for RNA: ENST00000378505.6

RPGR-203, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene RPGR, Length 4,767 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-203ENST00000378505 NAP1L3Q99457 506 aaPredicted RBP12.6□□□□□ -0.39
RPGR-203ENST00000378505 CARD10Q9BWT7 1032 aa12.6□□□□□ -0.39
RPGR-203ENST00000378505 BCORL1Q5H9F3 1711 aa12.6□□□□□ -0.39
RPGR-203ENST00000378505 SASH1O94885 1247 aa12.6□□□□□ -0.39
RPGR-203ENST00000378505 KIF4AO95239 1232 aa12.6□□□□□ -0.39
RPGR-203ENST00000378505 MNAT1P51948 309 aa12.6□□□□□ -0.39
RPGR-203ENST00000378505 NECTIN1Q15223 517 aa12.6□□□□□ -0.39
RPGR-203ENST00000378505 DYMQ7RTS9 669 aa12.6□□□□□ -0.39
RPGR-203ENST00000378505 CMTR1Q8N1G2 835 aaKnown RBP12.6□□□□□ -0.39
RPGR-203ENST00000378505 ARHGEF10LQ9HCE6 1279 aa12.6□□□□□ -0.39
RPGR-203ENST00000378505 ZBTB21Q9ULJ3 1066 aa12.6□□□□□ -0.39
RPGR-203ENST00000378505 CLIC4Q9Y696 253 aa12.6□□□□□ -0.39
RPGR-203ENST00000378505 ABCC3O15438 1527 aa12.6□□□□□ -0.39
RPGR-203ENST00000378505 TLDC2A0PJX2 215 aa12.6□□□□□ -0.39
RPGR-203ENST00000378505 ATP2C2O75185 946 aa12.6□□□□□ -0.39
RPGR-203ENST00000378505 ADKP55263 362 aaKnown RBP12.6□□□□□ -0.39
RPGR-203ENST00000378505 PLCB3Q01970 1234 aa12.6□□□□□ -0.39
RPGR-203ENST00000378505 GABPB1Q06547 395 aaPredicted RBP12.6□□□□□ -0.39
RPGR-203ENST00000378505 APOA5Q6Q788 366 aa12.6□□□□□ -0.39
RPGR-203ENST00000378505 FANCLQ9NW38 375 aa12.6□□□□□ -0.39
RPGR-203ENST00000378505 SMCO2A6NFE2 343 aa12.59□□□□□ -0.39
RPGR-203ENST00000378505 CALCOCO2Q13137 446 aa12.59□□□□□ -0.39
RPGR-203ENST00000378505 DNAJC21Q5F1R6 531 aaKnown RBP12.59□□□□□ -0.39
RPGR-203ENST00000378505 POLR3EQ9NVU0 708 aa12.59□□□□□ -0.39
RPGR-203ENST00000378505 DNM3Q9UQ16 869 aa12.59□□□□□ -0.39
RPGR-203ENST00000378505 CALUO43852 315 aaPredicted RBP12.59□□□□□ -0.39
RPGR-203ENST00000378505 TNFAIP3P21580 790 aa12.59□□□□□ -0.39
RPGR-203ENST00000378505 ASIC2Q16515 512 aa12.59□□□□□ -0.39
RPGR-203ENST00000378505 FAM98CQ17RN3 349 aaKnown RBP12.59□□□□□ -0.39
RPGR-203ENST00000378505 PNMA1Q8ND90 353 aa12.59□□□□□ -0.39
RPGR-203ENST00000378505 MAP3K4Q9Y6R4 1608 aa12.59□□□□□ -0.39
RPGR-203ENST00000378505 BACH1O14867 736 aa12.59□□□□□ -0.39
RPGR-203ENST00000378505 SCG2P13521 617 aa12.59□□□□□ -0.39
RPGR-203ENST00000378505 PCDHA5Q9Y5H7 936 aa12.59□□□□□ -0.39
RPGR-203ENST00000378505 IL6STP40189 918 aaPredicted RBP12.58□□□□□ -0.39
RPGR-203ENST00000378505 DPP8Q6V1X1 898 aaPredicted RBP12.58□□□□□ -0.39
RPGR-203ENST00000378505 GSTA5Q7RTV2 222 aa12.58□□□□□ -0.39
RPGR-203ENST00000378505 OTUD6BQ8N6M0 293 aa12.58□□□□□ -0.39
RPGR-203ENST00000378505 ANKS4BQ8N8V4 417 aa12.58□□□□□ -0.39
RPGR-203ENST00000378505 ZBTB9Q96C00 473 aa12.58□□□□□ -0.39
RPGR-203ENST00000378505 TTC14Q96N46 770 aa12.58□□□□□ -0.39
RPGR-203ENST00000378505 CLIC6Q96NY7 704 aa12.58□□□□□ -0.39
RPGR-203ENST00000378505 NUCKS1Q9H1E3 243 aaKnown RBP12.58□□□□□ -0.39
RPGR-203ENST00000378505 HECW2Q9P2P5 1572 aa12.58□□□□□ -0.4
RPGR-203ENST00000378505 CHRNDQ07001 517 aa12.58□□□□□ -0.4
RPGR-203ENST00000378505 ASAP1Q9ULH1 1129 aa12.58□□□□□ -0.4
RPGR-203ENST00000378505 CEP83Q9Y592 693 aa12.58□□□□□ -0.4
RPGR-203ENST00000378505 GJC1P36383 396 aa12.58□□□□□ -0.4
RPGR-203ENST00000378505 CPLX4Q7Z7G2 160 aa12.58□□□□□ -0.4
RPGR-203ENST00000378505 NT5C3AQ9H0P0 336 aa12.58□□□□□ -0.4
RPGR-203ENST00000378505 CARMIL3Q8ND23 1372 aa12.58□□□□□ -0.4
RPGR-203ENST00000378505 ARHGEF35A5YM69 484 aa12.58□□□□□ -0.4
RPGR-203ENST00000378505 DDAH1O94760 285 aa12.58□□□□□ -0.4
RPGR-203ENST00000378505 ZNF827Q17R98 1081 aa12.58□□□□□ -0.4
RPGR-203ENST00000378505 RBM26Q5T8P6 1007 aaKnown RBP12.58□□□□□ -0.4
RPGR-203ENST00000378505 SPATA1Q5VX52 437 aa12.58□□□□□ -0.4
RPGR-203ENST00000378505 GALNT17Q6IS24 598 aa12.58□□□□□ -0.4
RPGR-203ENST00000378505 IQCGQ9H095 443 aaKnown RBP12.58□□□□□ -0.4
RPGR-203ENST00000378505 TMEM94Q12767 1356 aa12.58□□□□□ -0.4
RPGR-203ENST00000378505 H7C1D1 291 aa12.57□□□□□ -0.4
RPGR-203ENST00000378505 PPP6R2O75170 966 aa12.57□□□□□ -0.4
RPGR-203ENST00000378505 NBPF14Q5TI25 921 aa12.57□□□□□ -0.4
RPGR-203ENST00000378505 NCAPH2Q6IBW4 605 aa12.57□□□□□ -0.4
RPGR-203ENST00000378505 CCDC50Q8IVM0 306 aa12.57□□□□□ -0.4
RPGR-203ENST00000378505 ATP8A2Q9NTI2 1148 aa12.57□□□□□ -0.4
RPGR-203ENST00000378505 ZCCHC11Q5TAX3 1644 aaKnown RBP12.57□□□□□ -0.4
RPGR-203ENST00000378505 CDC42BPAQ5VT25 1732 aa12.57□□□□□ -0.4
RPGR-203ENST00000378505 CHMP2AO43633 222 aa12.57□□□□□ -0.4
RPGR-203ENST00000378505 GTPBP6O43824 516 aaPredicted RBP12.57□□□□□ -0.4
RPGR-203ENST00000378505 SEL1L2Q5TEA6 688 aa12.57□□□□□ -0.4
RPGR-203ENST00000378505 DNM2P50570 870 aa12.57□□□□□ -0.4
RPGR-203ENST00000378505 SMTNP53814 917 aa12.57□□□□□ -0.4
RPGR-203ENST00000378505 KLHL30Q0D2K2 578 aa12.57□□□□□ -0.4
RPGR-203ENST00000378505 MFSD14BQ5SR56 506 aa12.57□□□□□ -0.4
RPGR-203ENST00000378505 UTP14CQ5TAP6 766 aaKnown RBP12.57□□□□□ -0.4
RPGR-203ENST00000378505 CCDC121Q6ZUS5 278 aa12.57□□□□□ -0.4
RPGR-203ENST00000378505 PPP1R14CQ8TAE6 165 aa12.57□□□□□ -0.4
RPGR-203ENST00000378505 RPGRIP1Q96KN7 1286 aa12.57□□□□□ -0.4
RPGR-203ENST00000378505 FOXP1Q9H334 677 aaPredicted RBP12.57□□□□□ -0.4
RPGR-203ENST00000378505 ZNF215Q9UL58 517 aaPredicted RBP12.57□□□□□ -0.4
RPGR-203ENST00000378505 PSDA5PKW4 1024 aaPredicted RBP12.57□□□□□ -0.4
RPGR-203ENST00000378505 KCNJ18B7U540 433 aa12.57□□□□□ -0.4
RPGR-203ENST00000378505 KCNJ12Q14500 433 aa12.57□□□□□ -0.4
RPGR-203ENST00000378505 PPP1R7Q15435 360 aa12.57□□□□□ -0.4
RPGR-203ENST00000378505 LONRF3Q496Y0 759 aa12.57□□□□□ -0.4
RPGR-203ENST00000378505 TICAM2Q86XR7 235 aa12.57□□□□□ -0.4
RPGR-203ENST00000378505 IFT20Q8IY31 132 aa12.57□□□□□ -0.4
RPGR-203ENST00000378505 GPR161Q8N6U8 529 aaKnown RBP12.57□□□□□ -0.4
RPGR-203ENST00000378505 TSC1Q92574 1164 aa12.57□□□□□ -0.4
RPGR-203ENST00000378505 SELENOSQ9BQE4 189 aa12.57□□□□□ -0.4
RPGR-203ENST00000378505 RNF26Q9BY78 433 aaPredicted RBP12.57□□□□□ -0.4
RPGR-203ENST00000378505 LOC102724428A0A0B4J2F2 783 aa12.56□□□□□ -0.4
RPGR-203ENST00000378505 SIK1P57059 783 aa12.56□□□□□ -0.4
RPGR-203ENST00000378505 AFAP1L1Q8TED9 768 aa12.56□□□□□ -0.4
RPGR-203ENST00000378505 PAIP2Q9BPZ3 127 aaKnown RBP12.56□□□□□ -0.4
RPGR-203ENST00000378505 TSKSQ9UJT2 592 aa12.56□□□□□ -0.4
RPGR-203ENST00000378505 ZBTB1Q9Y2K1 713 aa12.56□□□□□ -0.4
RPGR-203ENST00000378505 A6NNZ2 444 aa12.56□□□□□ -0.4
RPGR-203ENST00000378505 KLRF2D3W0D1 207 aa12.56□□□□□ -0.4
RPGR-203ENST00000378505 SPOPO43791 374 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms