RNA–Protein interactions for RNA: ENST00000378125.4

PCDHA4-201, Transcript of protocadherin alpha 4, humanhuman

TSL 5 BASIC

Gene PCDHA4, Length 2,328 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4-201ENST00000378125 PTPREP23469 700 aa22.09■■□□□ 1.13
PCDHA4-201ENST00000378125 LMOD1P29536 600 aaPredicted RBP22.09■■□□□ 1.13
PCDHA4-201ENST00000378125 SBK1Q52WX2 424 aa22.09■■□□□ 1.13
PCDHA4-201ENST00000378125 CNTNAP5Q8WYK1 1306 aa22.08■■□□□ 1.13
PCDHA4-201ENST00000378125 DDAH1O94760 285 aa22.08■■□□□ 1.13
PCDHA4-201ENST00000378125 ST5P78524 1137 aa22.08■■□□□ 1.13
PCDHA4-201ENST00000378125 PCDHA5Q9Y5H7 936 aa22.08■■□□□ 1.13
PCDHA4-201ENST00000378125 FAM237AA0A1B0GTK4 181 aa22.08■■□□□ 1.12
PCDHA4-201ENST00000378125 USP17L3A6NCW0 530 aa22.08■■□□□ 1.12
PCDHA4-201ENST00000378125 USP17L4A6NCW7 530 aa22.08■■□□□ 1.12
PCDHA4-201ENST00000378125 RBM10P98175 930 aaKnown RBP22.08■■□□□ 1.12
PCDHA4-201ENST00000378125 C12orf60Q5U649 245 aa22.08■■□□□ 1.12
PCDHA4-201ENST00000378125 RCSD1Q6JBY9 416 aa22.08■■□□□ 1.12
PCDHA4-201ENST00000378125 USP17L1Q7RTZ2 530 aa22.08■■□□□ 1.12
PCDHA4-201ENST00000378125 CSRNP2Q9H175 543 aa22.08■■□□□ 1.12
PCDHA4-201ENST00000378125 QTRT2Q9H974 415 aaKnown RBP22.08■■□□□ 1.12
PCDHA4-201ENST00000378125 IL17RBQ9NRM6 502 aa22.08■■□□□ 1.12
PCDHA4-201ENST00000378125 IFNKQ9P0W0 207 aa22.08■■□□□ 1.12
PCDHA4-201ENST00000378125 SERTAD1Q9UHV2 236 aa22.08■■□□□ 1.12
PCDHA4-201ENST00000378125 TUBE1Q9UJT0 475 aa22.08■■□□□ 1.12
PCDHA4-201ENST00000378125 ADAMTS3O15072 1205 aa22.07■■□□□ 1.12
PCDHA4-201ENST00000378125 ONECUT3O60422 494 aaPredicted RBP22.07■■□□□ 1.12
PCDHA4-201ENST00000378125 PLCD1P51178 756 aa22.07■■□□□ 1.12
PCDHA4-201ENST00000378125 NCAPHQ15003 741 aa22.07■■□□□ 1.12
PCDHA4-201ENST00000378125 XPO4Q9C0E2 1151 aaKnown RBP22.07■■□□□ 1.12
PCDHA4-201ENST00000378125 MKNK2Q9HBH9 465 aa22.07■■□□□ 1.12
PCDHA4-201ENST00000378125 FAM13BQ9NYF5 915 aa22.07■■□□□ 1.12
PCDHA4-201ENST00000378125 PRR29P0C7W0 189 aa22.07■■□□□ 1.12
PCDHA4-201ENST00000378125 ZNF174Q15697 407 aa22.07■■□□□ 1.12
PCDHA4-201ENST00000378125 LRRC8AQ8IWT6 810 aa22.07■■□□□ 1.12
PCDHA4-201ENST00000378125 CD209Q9NNX6 404 aa22.07■■□□□ 1.12
PCDHA4-201ENST00000378125 LAMB1P07942 1786 aa22.06■■□□□ 1.12
PCDHA4-201ENST00000378125 KIAA1551Q9HCM1 1747 aa22.06■■□□□ 1.12
PCDHA4-201ENST00000378125 ATP1A3P13637 1013 aa22.06■■□□□ 1.12
PCDHA4-201ENST00000378125 BPIFA3Q9BQP9 254 aa22.06■■□□□ 1.12
PCDHA4-201ENST00000378125 KAT14Q9H8E8 782 aa22.06■■□□□ 1.12
PCDHA4-201ENST00000378125 MKRN1Q9UHC7 482 aaKnown RBP22.06■■□□□ 1.12
PCDHA4-201ENST00000378125 TRIM75PA6NK02 468 aa22.06■■□□□ 1.12
PCDHA4-201ENST00000378125 TERF1P54274 439 aa22.06■■□□□ 1.12
PCDHA4-201ENST00000378125 NOL10Q9BSC4 688 aaKnown RBP22.06■■□□□ 1.12
PCDHA4-201ENST00000378125 GGA1Q9UJY5 639 aa22.06■■□□□ 1.12
PCDHA4-201ENST00000378125 SRPRBQ9Y5M8 271 aaKnown RBP22.06■■□□□ 1.12
PCDHA4-201ENST00000378125 MAST2Q6P0Q8 1798 aa22.05■■□□□ 1.12
PCDHA4-201ENST00000378125 BAG3O95817 575 aa22.05■■□□□ 1.12
PCDHA4-201ENST00000378125 ADRA2BP18089 450 aa22.05■■□□□ 1.12
PCDHA4-201ENST00000378125 DDR1Q08345 913 aa22.05■■□□□ 1.12
PCDHA4-201ENST00000378125 STAG2Q8N3U4 1231 aa22.05■■□□□ 1.12
PCDHA4-201ENST00000378125 RBM17Q96I25 401 aaKnown RBP22.05■■□□□ 1.12
PCDHA4-201ENST00000378125 CEP131Q9UPN4 1083 aa22.05■■□□□ 1.12
PCDHA4-201ENST00000378125 NPY5RQ15761 445 aa22.05■■□□□ 1.12
PCDHA4-201ENST00000378125 HSP90AA4PQ58FG1 418 aa22.05■■□□□ 1.12
PCDHA4-201ENST00000378125 EPSTI1Q96J88 318 aa22.05■■□□□ 1.12
PCDHA4-201ENST00000378125 BMP6P22004 513 aa22.04■■□□□ 1.12
PCDHA4-201ENST00000378125 BTDP43251 543 aa22.04■■□□□ 1.12
PCDHA4-201ENST00000378125 NLRP5P59047 1200 aa22.04■■□□□ 1.12
PCDHA4-201ENST00000378125 PTPN21Q16825 1174 aa22.04■■□□□ 1.12
PCDHA4-201ENST00000378125 ZNF827Q17R98 1081 aa22.04■■□□□ 1.12
PCDHA4-201ENST00000378125 TSC1Q92574 1164 aa22.04■■□□□ 1.12
PCDHA4-201ENST00000378125 C16orf45Q96MC5 204 aaPredicted RBP22.04■■□□□ 1.12
PCDHA4-201ENST00000378125 POLLQ9UGP5 575 aa22.04■■□□□ 1.12
PCDHA4-201ENST00000378125 DLEC1Q9Y238 1755 aa22.04■■□□□ 1.12
PCDHA4-201ENST00000378125 GOLGB1Q14789 3259 aaKnown RBP22.04■■□□□ 1.12
PCDHA4-201ENST00000378125 C6orf229H3BNL8 230 aa22.03■■□□□ 1.12
PCDHA4-201ENST00000378125 TSPY3P0CV98 308 aa22.03■■□□□ 1.12
PCDHA4-201ENST00000378125 TSPY8P0CW00 308 aa22.03■■□□□ 1.12
PCDHA4-201ENST00000378125 GSTO1P78417 241 aa22.03■■□□□ 1.12
PCDHA4-201ENST00000378125 MDM2Q00987 491 aaPredicted RBP22.03■■□□□ 1.12
PCDHA4-201ENST00000378125 CRY2Q49AN0 593 aa22.03■■□□□ 1.12
PCDHA4-201ENST00000378125 GPKOWQ92917 476 aaPredicted RBP eCLIP22.03■■□□□ 1.12
PCDHA4-201ENST00000378125 BRMS1Q9HCU9 246 aa22.03■■□□□ 1.12
PCDHA4-201ENST00000378125 SMTNL1A8MU46 457 aa22.03■■□□□ 1.12
PCDHA4-201ENST00000378125 SCG2P13521 617 aa22.03■■□□□ 1.12
PCDHA4-201ENST00000378125 TPM4P67936 248 aa22.03■■□□□ 1.12
PCDHA4-201ENST00000378125 POSTNQ15063 836 aa22.03■■□□□ 1.12
PCDHA4-201ENST00000378125 PIK3AP1Q6ZUJ8 805 aa22.03■■□□□ 1.12
PCDHA4-201ENST00000378125 PNMA1Q8ND90 353 aa22.03■■□□□ 1.12
PCDHA4-201ENST00000378125 RTFDC1Q9BY42 306 aaPredicted RBP22.03■■□□□ 1.12
PCDHA4-201ENST00000378125 RIMBP2O15034 1052 aa22.02■■□□□ 1.12
PCDHA4-201ENST00000378125 OLFM4Q6UX06 510 aa22.02■■□□□ 1.12
PCDHA4-201ENST00000378125 RASGRP2Q7LDG7 609 aa22.02■■□□□ 1.12
PCDHA4-201ENST00000378125 TMC6Q7Z403 805 aa22.02■■□□□ 1.12
PCDHA4-201ENST00000378125 CERKQ8TCT0 537 aa22.02■■□□□ 1.12
PCDHA4-201ENST00000378125 DHX58Q96C10 678 aa22.02■■□□□ 1.12
PCDHA4-201ENST00000378125 HSD3B7Q9H2F3 369 aa22.02■■□□□ 1.12
PCDHA4-201ENST00000378125 STX8Q9UNK0 236 aa22.02■■□□□ 1.12
PCDHA4-201ENST00000378125 UBR3Q6ZT12 1888 aa22.02■■□□□ 1.11
PCDHA4-201ENST00000378125 A0A087X0B3 334 aa22.01■■□□□ 1.11
PCDHA4-201ENST00000378125 SKILP12757 684 aa22.01■■□□□ 1.11
PCDHA4-201ENST00000378125 ATP2B4P23634 1241 aa22.01■■□□□ 1.11
PCDHA4-201ENST00000378125 MFSD14BQ5SR56 506 aa22.01■■□□□ 1.11
PCDHA4-201ENST00000378125 AMOTL1Q8IY63 956 aa22.01■■□□□ 1.11
PCDHA4-201ENST00000378125 ZNF444Q8N0Y2 327 aaPredicted RBP22.01■■□□□ 1.11
PCDHA4-201ENST00000378125 CASP1P29466 404 aa22.01■■□□□ 1.11
PCDHA4-201ENST00000378125 FANCCQ00597 558 aa22.01■■□□□ 1.11
PCDHA4-201ENST00000378125 TBC1D16Q8TBP0 767 aa22.01■■□□□ 1.11
PCDHA4-201ENST00000378125 TNFRSF25Q93038 417 aa22.01■■□□□ 1.11
PCDHA4-201ENST00000378125 MAN1B1Q9UKM7 699 aa22.01■■□□□ 1.11
PCDHA4-201ENST00000378125 LDHCP07864 332 aa22■■□□□ 1.11
PCDHA4-201ENST00000378125 AFMP43652 599 aa22■■□□□ 1.11
PCDHA4-201ENST00000378125 PFKFB3Q16875 520 aaPredicted RBP22■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms