RNA–Protein interactions for RNA: ENST00000377344.6

CBWD3-203, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,813 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-203ENST00000377344 SLC12A7Q9Y666 1083 aa15.19■□□□□ 0.02
CBWD3-203ENST00000377344 SSC5DA1L4H1 1573 aa15.19■□□□□ 0.02
CBWD3-203ENST00000377344 TRAF5O00463 557 aa15.18■□□□□ 0.02
CBWD3-203ENST00000377344 SLC4A3P48751 1232 aa15.18■□□□□ 0.02
CBWD3-203ENST00000377344 JAG1P78504 1218 aa15.18■□□□□ 0.02
CBWD3-203ENST00000377344 TTLL12Q14166 644 aaPredicted RBP15.18■□□□□ 0.02
CBWD3-203ENST00000377344 SEPT2Q15019 361 aa15.18■□□□□ 0.02
CBWD3-203ENST00000377344 SYNE3Q6ZMZ3 975 aa15.18■□□□□ 0.02
CBWD3-203ENST00000377344 DGKHQ86XP1 1220 aa15.18■□□□□ 0.02
CBWD3-203ENST00000377344 RAB11FIP4Q86YS3 637 aa15.18■□□□□ 0.02
CBWD3-203ENST00000377344 TMX3Q96JJ7 454 aa15.18■□□□□ 0.02
CBWD3-203ENST00000377344 ZSCAN31Q96LW9 406 aaPredicted RBP15.18■□□□□ 0.02
CBWD3-203ENST00000377344 KAT14Q9H8E8 782 aa15.18■□□□□ 0.02
CBWD3-203ENST00000377344 ZNF408Q9H9D4 720 aa15.18■□□□□ 0.02
CBWD3-203ENST00000377344 MTMR4Q9NYA4 1195 aa15.18■□□□□ 0.02
CBWD3-203ENST00000377344 BRPF3Q9ULD4 1205 aa15.18■□□□□ 0.02
CBWD3-203ENST00000377344 LARGE1O95461 756 aa15.17■□□□□ 0.02
CBWD3-203ENST00000377344 ME3Q16798 604 aa15.17■□□□□ 0.02
CBWD3-203ENST00000377344 RCSD1Q6JBY9 416 aa15.17■□□□□ 0.02
CBWD3-203ENST00000377344 SGMS1Q86VZ5 419 aa15.17■□□□□ 0.02
CBWD3-203ENST00000377344 MYL10Q9BUA6 226 aa15.17■□□□□ 0.02
CBWD3-203ENST00000377344 KANSL2Q9H9L4 492 aa15.17■□□□□ 0.02
CBWD3-203ENST00000377344 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.17■□□□□ 0.02
CBWD3-203ENST00000377344 CLIP2Q9UDT6 1046 aa15.17■□□□□ 0.02
CBWD3-203ENST00000377344 ZBTB21Q9ULJ3 1066 aa15.17■□□□□ 0.02
CBWD3-203ENST00000377344 IGKV6D-41A0A0C4DH26 115 aa15.17■□□□□ 0.02
CBWD3-203ENST00000377344 GOLGA8BA8MQT2 603 aa15.17■□□□□ 0.02
CBWD3-203ENST00000377344 CTNND1O60716 968 aaKnown RBP15.17■□□□□ 0.02
CBWD3-203ENST00000377344 TTLL1O95922 423 aa15.17■□□□□ 0.02
CBWD3-203ENST00000377344 HSP90AA1P07900 732 aaKnown RBP15.17■□□□□ 0.02
CBWD3-203ENST00000377344 INPP5BP32019 993 aa15.17■□□□□ 0.02
CBWD3-203ENST00000377344 ICA1Q05084 483 aa15.17■□□□□ 0.02
CBWD3-203ENST00000377344 PPP4R3BQ5MIZ7 849 aa15.17■□□□□ 0.02
CBWD3-203ENST00000377344 MICU3Q86XE3 530 aa15.17■□□□□ 0.02
CBWD3-203ENST00000377344 NUP133Q8WUM0 1156 aa15.17■□□□□ 0.02
CBWD3-203ENST00000377344 ZKSCAN4Q969J2 545 aaPredicted RBP15.17■□□□□ 0.02
CBWD3-203ENST00000377344 SLKQ9H2G2 1235 aaPredicted RBP15.17■□□□□ 0.02
CBWD3-203ENST00000377344 SH2B1Q9NRF2 756 aaPredicted RBP15.17■□□□□ 0.02
CBWD3-203ENST00000377344 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.17■□□□□ 0.02
CBWD3-203ENST00000377344 MTMR7Q9Y216 660 aa15.17■□□□□ 0.02
CBWD3-203ENST00000377344 USP2O75604 605 aaPredicted RBP15.16■□□□□ 0.02
CBWD3-203ENST00000377344 ASNSP08243 561 aa15.16■□□□□ 0.02
CBWD3-203ENST00000377344 RXRAP19793 462 aa15.16■□□□□ 0.02
CBWD3-203ENST00000377344 PDIA3P30101 505 aaKnown RBP15.16■□□□□ 0.02
CBWD3-203ENST00000377344 GUCY1A2P33402 732 aa15.16■□□□□ 0.02
CBWD3-203ENST00000377344 FMR1Q06787 632 aaKnown RBP eCLIP15.16■□□□□ 0.02
CBWD3-203ENST00000377344 CHADLQ6NUI6 762 aa15.16■□□□□ 0.02
CBWD3-203ENST00000377344 APOA5Q6Q788 366 aa15.16■□□□□ 0.02
CBWD3-203ENST00000377344 CATIPQ7Z7H3 387 aa15.16■□□□□ 0.02
CBWD3-203ENST00000377344 ZNF654Q8IZM8 581 aa15.16■□□□□ 0.02
CBWD3-203ENST00000377344 NECAB1Q8N987 351 aa15.16■□□□□ 0.02
CBWD3-203ENST00000377344 SPRYD3Q8NCJ5 442 aa15.16■□□□□ 0.02
CBWD3-203ENST00000377344 CHMP4CQ96CF2 233 aa15.16■□□□□ 0.02
CBWD3-203ENST00000377344 KLRG1Q96E93 195 aa15.16■□□□□ 0.02
CBWD3-203ENST00000377344 ZNF274Q96GC6 653 aaPredicted RBP15.16■□□□□ 0.02
CBWD3-203ENST00000377344 IPO9Q96P70 1041 aaKnown RBP15.16■□□□□ 0.02
CBWD3-203ENST00000377344 TMEM47Q9BQJ4 181 aa15.16■□□□□ 0.02
CBWD3-203ENST00000377344 ZBTB43O43298 467 aa15.15■□□□□ 0.02
CBWD3-203ENST00000377344 RAD21O60216 631 aa15.15■□□□□ 0.02
CBWD3-203ENST00000377344 EEF2P13639 858 aaKnown RBP15.15■□□□□ 0.02
CBWD3-203ENST00000377344 IREB2P48200 963 aaKnown RBP15.15■□□□□ 0.02
CBWD3-203ENST00000377344 CCT2P78371 535 aaKnown RBP15.15■□□□□ 0.02
CBWD3-203ENST00000377344 CCDC83Q8IWF9 413 aa15.15■□□□□ 0.02
CBWD3-203ENST00000377344 CCDC144CPQ8IYA2 1237 aa15.15■□□□□ 0.02
CBWD3-203ENST00000377344 LRRC47Q8N1G4 583 aaKnown RBP15.15■□□□□ 0.02
CBWD3-203ENST00000377344 PNMA1Q8ND90 353 aa15.15■□□□□ 0.02
CBWD3-203ENST00000377344 ZNF112Q9UJU3 913 aa15.15■□□□□ 0.02
CBWD3-203ENST00000377344 TOP1P11387 765 aaKnown RBP15.15■□□□□ 0.02
CBWD3-203ENST00000377344 YY1P25490 414 aa15.15■□□□□ 0.02
CBWD3-203ENST00000377344 METAP2P50579 478 aaKnown RBP eCLIP15.15■□□□□ 0.02
CBWD3-203ENST00000377344 EVCP57679 992 aa15.15■□□□□ 0.02
CBWD3-203ENST00000377344 ANKS1AQ92625 1134 aa15.15■□□□□ 0.02
CBWD3-203ENST00000377344 PICK1Q9NRD5 415 aa15.15■□□□□ 0.02
CBWD3-203ENST00000377344 FOXD4L1Q9NU39 408 aa15.15■□□□□ 0.02
CBWD3-203ENST00000377344 GREB1LQ9C091 1923 aaPredicted RBP15.15■□□□□ 0.02
CBWD3-203ENST00000377344 GOLGA8AA7E2F4 631 aa15.14■□□□□ 0.01
CBWD3-203ENST00000377344 MOB2Q70IA6 237 aa15.14■□□□□ 0.01
CBWD3-203ENST00000377344 ARMC9Q7Z3E5 817 aa15.14■□□□□ 0.01
CBWD3-203ENST00000377344 CCDC84Q86UT8 332 aaPredicted RBP15.14■□□□□ 0.01
CBWD3-203ENST00000377344 SCYL3Q8IZE3 742 aa15.14■□□□□ 0.01
CBWD3-203ENST00000377344 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.14■□□□□ 0.01
CBWD3-203ENST00000377344 NYAP2Q9P242 653 aa15.14■□□□□ 0.01
CBWD3-203ENST00000377344 CSADQ9Y600 493 aa15.14■□□□□ 0.01
CBWD3-203ENST00000377344 ATAD5Q96QE3 1844 aa15.14■□□□□ 0.01
CBWD3-203ENST00000377344 PFKFB2O60825 505 aa15.13■□□□□ 0.01
CBWD3-203ENST00000377344 MAP3K9P80192 1104 aa15.13■□□□□ 0.01
CBWD3-203ENST00000377344 NCOA5Q9HCD5 579 aaKnown RBP15.13■□□□□ 0.01
CBWD3-203ENST00000377344 ARHGEF10LQ9HCE6 1279 aa15.13■□□□□ 0.01
CBWD3-203ENST00000377344 DDAH1O94760 285 aa15.13■□□□□ 0.01
CBWD3-203ENST00000377344 CALM1P0DP23 149 aa15.13■□□□□ 0.01
CBWD3-203ENST00000377344 CALM2P0DP24 149 aa15.13■□□□□ 0.01
CBWD3-203ENST00000377344 CALM3P0DP25 149 aa15.13■□□□□ 0.01
CBWD3-203ENST00000377344 NOVP48745 357 aa15.13■□□□□ 0.01
CBWD3-203ENST00000377344 SCRN1Q12765 414 aa15.13■□□□□ 0.01
CBWD3-203ENST00000377344 GTF3C6Q969F1 213 aa15.13■□□□□ 0.01
CBWD3-203ENST00000377344 GINM1Q9NU53 330 aa15.13■□□□□ 0.01
CBWD3-203ENST00000377344 HPS5Q9UPZ3 1129 aa15.13■□□□□ 0.01
CBWD3-203ENST00000377344 DOCK1Q14185 1865 aa15.12■□□□□ 0.01
CBWD3-203ENST00000377344 USP17L5A8MUK1 530 aa15.12■□□□□ 0.01
CBWD3-203ENST00000377344 KIF3CO14782 793 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms