RNA–Protein interactions for RNA: ENST00000377298.8

CLSTN1-202, Transcript of calsyntenin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLSTN1, Length 5,221 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-202ENST00000377298 FAM182BQ5T319 152 aa20■□□□□ 0.79
CLSTN1-202ENST00000377298 NLRX1Q86UT6 975 aa20■□□□□ 0.79
CLSTN1-202ENST00000377298 NOSTRINQ8IVI9 506 aa20■□□□□ 0.79
CLSTN1-202ENST00000377298 CYP27B1O15528 508 aa20■□□□□ 0.79
CLSTN1-202ENST00000377298 HARSP12081 509 aaKnown RBP20■□□□□ 0.79
CLSTN1-202ENST00000377298 NLRP12P59046 1061 aa20■□□□□ 0.79
CLSTN1-202ENST00000377298 CDAN1Q8IWY9 1227 aa20■□□□□ 0.79
CLSTN1-202ENST00000377298 CCDC155Q8N6L0 562 aa20■□□□□ 0.79
CLSTN1-202ENST00000377298 SMCR8Q8TEV9 937 aaPredicted RBP20■□□□□ 0.79
CLSTN1-202ENST00000377298 TSGA10Q9BZW7 698 aa20■□□□□ 0.79
CLSTN1-202ENST00000377298 MRPL11Q9Y3B7 192 aaKnown RBP20■□□□□ 0.79
CLSTN1-202ENST00000377298 ADCY9O60503 1353 aa20■□□□□ 0.79
CLSTN1-202ENST00000377298 ARHGAP27Q6ZUM4 889 aa19.99■□□□□ 0.79
CLSTN1-202ENST00000377298 DDX39AO00148 427 aaKnown RBP19.99■□□□□ 0.79
CLSTN1-202ENST00000377298 IGSF22Q8N9C0 903 aa19.99■□□□□ 0.79
CLSTN1-202ENST00000377298 BAG1Q99933 345 aaPredicted RBP19.99■□□□□ 0.79
CLSTN1-202ENST00000377298 UNC13BO14795 1591 aa19.99■□□□□ 0.79
CLSTN1-202ENST00000377298 ALKQ9UM73 1620 aa19.99■□□□□ 0.79
CLSTN1-202ENST00000377298 VPS16Q9H269 839 aa19.99■□□□□ 0.79
CLSTN1-202ENST00000377298 PSTPIP2Q9H939 334 aa19.99■□□□□ 0.79
CLSTN1-202ENST00000377298 PALD1Q9ULE6 856 aa19.99■□□□□ 0.79
CLSTN1-202ENST00000377298 HSF2BPO75031 334 aa19.99■□□□□ 0.79
CLSTN1-202ENST00000377298 LSG1Q9H089 658 aaKnown RBP19.99■□□□□ 0.79
CLSTN1-202ENST00000377298 TLR7Q9NYK1 1049 aaKnown RBP19.99■□□□□ 0.79
CLSTN1-202ENST00000377298 SCG2P13521 617 aa19.98■□□□□ 0.79
CLSTN1-202ENST00000377298 ADD1P35611 737 aaKnown RBP19.98■□□□□ 0.79
CLSTN1-202ENST00000377298 TAF12Q16514 161 aa19.98■□□□□ 0.79
CLSTN1-202ENST00000377298 GNPTABQ3T906 1256 aa19.98■□□□□ 0.79
CLSTN1-202ENST00000377298 ZNF354CQ86Y25 554 aa19.98■□□□□ 0.79
CLSTN1-202ENST00000377298 TPCN1Q9ULQ1 816 aa19.98■□□□□ 0.79
CLSTN1-202ENST00000377298 KDM3AQ9Y4C1 1321 aa19.98■□□□□ 0.79
CLSTN1-202ENST00000377298 SWAP70Q9UH65 585 aa19.98■□□□□ 0.79
CLSTN1-202ENST00000377298 ZHX1Q9UKY1 873 aaPredicted RBP19.98■□□□□ 0.79
CLSTN1-202ENST00000377298 PABPN1LA6NDY0 278 aaKnown RBP19.98■□□□□ 0.79
CLSTN1-202ENST00000377298 DNM2P50570 870 aa19.98■□□□□ 0.79
CLSTN1-202ENST00000377298 MAPK8IP1Q9UQF2 711 aa19.98■□□□□ 0.79
CLSTN1-202ENST00000377298 GJC1P36383 396 aa19.98■□□□□ 0.79
CLSTN1-202ENST00000377298 PTPN12Q05209 780 aaKnown RBP19.98■□□□□ 0.79
CLSTN1-202ENST00000377298 ADALQ6DHV7 355 aa19.98■□□□□ 0.79
CLSTN1-202ENST00000377298 TSNARE1Q96NA8 513 aa19.98■□□□□ 0.79
CLSTN1-202ENST00000377298 TMEM110-MUSTN1A8MSY1 372 aa19.97■□□□□ 0.79
CLSTN1-202ENST00000377298 PABPC4Q13310 644 aaKnown RBP eCLIP19.97■□□□□ 0.796e-6■■■■■ 28.1
CLSTN1-202ENST00000377298 CC2D2BQ6DHV5 1058 aa19.97■□□□□ 0.79
CLSTN1-202ENST00000377298 NUP58Q9BVL2 599 aa19.97■□□□□ 0.79
CLSTN1-202ENST00000377298 LZTFL1Q9NQ48 299 aa19.97■□□□□ 0.79
CLSTN1-202ENST00000377298 RNF216Q9NWF9 866 aaPredicted RBP19.97■□□□□ 0.79
CLSTN1-202ENST00000377298 ATP2A1O14983 1001 aa19.97■□□□□ 0.79
CLSTN1-202ENST00000377298 GAS7O60861 476 aa19.97■□□□□ 0.79
CLSTN1-202ENST00000377298 SULF1Q8IWU6 871 aa19.97■□□□□ 0.79
CLSTN1-202ENST00000377298 MYCT1Q8N699 235 aa19.97■□□□□ 0.79
CLSTN1-202ENST00000377298 CCDC77Q9BR77 488 aa19.97■□□□□ 0.79
CLSTN1-202ENST00000377298 ATP6V0A2Q9Y487 856 aa19.97■□□□□ 0.79
CLSTN1-202ENST00000377298 RPS6KA4O75676 772 aa19.97■□□□□ 0.79
CLSTN1-202ENST00000377298 LRRC47Q8N1G4 583 aaKnown RBP19.97■□□□□ 0.79
CLSTN1-202ENST00000377298 STX10O60499 249 aa19.96■□□□□ 0.79
CLSTN1-202ENST00000377298 SLU7O95391 586 aaKnown RBP19.96■□□□□ 0.79
CLSTN1-202ENST00000377298 ABCB5Q2M3G0 1257 aa19.96■□□□□ 0.79
CLSTN1-202ENST00000377298 SLFN13Q68D06 897 aa19.96■□□□□ 0.79
CLSTN1-202ENST00000377298 DYMQ7RTS9 669 aa19.96■□□□□ 0.79
CLSTN1-202ENST00000377298 FBXO11Q86XK2 927 aa19.96■□□□□ 0.79
CLSTN1-202ENST00000377298 DCPSQ96C86 337 aaKnown RBP19.96■□□□□ 0.79
CLSTN1-202ENST00000377298 ARFGAP3Q9NP61 516 aa19.96■□□□□ 0.79
CLSTN1-202ENST00000377298 SLC5A4Q9NY91 659 aa19.96■□□□□ 0.79
CLSTN1-202ENST00000377298 ADGRB3O60242 1522 aa19.96■□□□□ 0.79
CLSTN1-202ENST00000377298 ZNF569Q5MCW4 686 aa19.96■□□□□ 0.79
CLSTN1-202ENST00000377298 POLR3GO15318 223 aaPredicted RBP19.96■□□□□ 0.79
CLSTN1-202ENST00000377298 ADD2P35612 726 aa19.96■□□□□ 0.79
CLSTN1-202ENST00000377298 KCNQ4P56696 695 aa19.96■□□□□ 0.79
CLSTN1-202ENST00000377298 FANCCQ00597 558 aa19.96■□□□□ 0.79
CLSTN1-202ENST00000377298 KARSQ15046 597 aaKnown RBP19.96■□□□□ 0.79
CLSTN1-202ENST00000377298 MCF2L2Q86YR7 1114 aa19.96■□□□□ 0.79
CLSTN1-202ENST00000377298 CALCOCO1Q9P1Z2 691 aa19.96■□□□□ 0.79
CLSTN1-202ENST00000377298 TNS3Q68CZ2 1445 aa19.96■□□□□ 0.79
CLSTN1-202ENST00000377298 H7C1W4 665 aa19.96■□□□□ 0.79
CLSTN1-202ENST00000377298 PLCB3Q01970 1234 aa19.96■□□□□ 0.79
CLSTN1-202ENST00000377298 TRPC3Q13507 836 aa19.96■□□□□ 0.79
CLSTN1-202ENST00000377298 CCDC50Q8IVM0 306 aa19.96■□□□□ 0.79
CLSTN1-202ENST00000377298 POLR2MP0CAP2 368 aa19.95■□□□□ 0.78
CLSTN1-202ENST00000377298 KRT5P13647 590 aa19.95■□□□□ 0.78
CLSTN1-202ENST00000377298 UTP18Q9Y5J1 556 aaKnown RBP eCLIP19.95■□□□□ 0.78
CLSTN1-202ENST00000377298 FRMPD2Q68DX3 1309 aaPredicted RBP19.95■□□□□ 0.78
CLSTN1-202ENST00000377298 GLI2P10070 1586 aa19.95■□□□□ 0.78
CLSTN1-202ENST00000377298 TNFAIP3P21580 790 aa19.95■□□□□ 0.78
CLSTN1-202ENST00000377298 CCDC122Q5T0U0 273 aa19.95■□□□□ 0.78
CLSTN1-202ENST00000377298 OTUD6AQ7L8S5 288 aa19.95■□□□□ 0.78
CLSTN1-202ENST00000377298 GOLGA1Q92805 767 aa19.95■□□□□ 0.78
CLSTN1-202ENST00000377298 SLC8A3P57103 927 aa19.95■□□□□ 0.78
CLSTN1-202ENST00000377298 MICALCLQ6ZW33 695 aa19.95■□□□□ 0.78
CLSTN1-202ENST00000377298 GSTA5Q7RTV2 222 aa19.95■□□□□ 0.78
CLSTN1-202ENST00000377298 PDIA3P30101 505 aaKnown RBP19.94■□□□□ 0.78
CLSTN1-202ENST00000377298 GRAPQ13588 217 aa19.94■□□□□ 0.78
CLSTN1-202ENST00000377298 GRAPLQ8TC17 118 aaPredicted RBP19.94■□□□□ 0.78
CLSTN1-202ENST00000377298 NFE2L3Q9Y4A8 694 aa19.94■□□□□ 0.78
CLSTN1-202ENST00000377298 RGS12O14924 1447 aa19.94■□□□□ 0.78
CLSTN1-202ENST00000377298 ALAS1P13196 640 aa19.94■□□□□ 0.78
CLSTN1-202ENST00000377298 NEK8Q86SG6 692 aa19.94■□□□□ 0.78
CLSTN1-202ENST00000377298 GPATCH4Q5T3I0 446 aaKnown RBP19.94■□□□□ 0.78
CLSTN1-202ENST00000377298 CMTR1Q8N1G2 835 aaKnown RBP19.94■□□□□ 0.78
CLSTN1-202ENST00000377298 POLA2Q14181 598 aa19.94■□□□□ 0.78
CLSTN1-202ENST00000377298 SUSD4Q5VX71 490 aa19.94■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms