RNA–Protein interactions for RNA: ENST00000376893.7

SSX3-202, Transcript of SSX family member 3, humanhuman

TSL 2 BASIC

Gene SSX3, Length 800 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3-202ENST00000376893 EPN3Q9H201 632 aa7.66□□□□□ -1.18
SSX3-202ENST00000376893 ZNF395Q9H8N7 513 aaPredicted RBP7.66□□□□□ -1.18
SSX3-202ENST00000376893 EFCC1Q9HA90 598 aa7.66□□□□□ -1.18
SSX3-202ENST00000376893 SEC31BQ9NQW1 1179 aa7.66□□□□□ -1.18
SSX3-202ENST00000376893 CYP8B1Q9UNU6 501 aa7.66□□□□□ -1.18
SSX3-202ENST00000376893 AFF2P51816 1311 aa7.66□□□□□ -1.18
SSX3-202ENST00000376893 RGS12O14924 1447 aa7.66□□□□□ -1.18
SSX3-202ENST00000376893 CPSF1Q10570 1443 aaKnown RBP7.66□□□□□ -1.18
SSX3-202ENST00000376893 SSH2Q76I76 1423 aa7.66□□□□□ -1.18
SSX3-202ENST00000376893 TNKS1BP1Q9C0C2 1729 aaKnown RBP7.66□□□□□ -1.18
SSX3-202ENST00000376893 TSPAN6O43657 245 aa7.65□□□□□ -1.18
SSX3-202ENST00000376893 SLIT2O94813 1529 aa7.65□□□□□ -1.18
SSX3-202ENST00000376893 NFAT5O94916 1531 aa7.65□□□□□ -1.18
SSX3-202ENST00000376893 ZIC2O95409 532 aaPredicted RBP7.65□□□□□ -1.18
SSX3-202ENST00000376893 MCM4P33991 863 aa7.65□□□□□ -1.18
SSX3-202ENST00000376893 GNALP38405 381 aa7.65□□□□□ -1.18
SSX3-202ENST00000376893 BNC2Q6ZN30 1099 aaPredicted RBP7.65□□□□□ -1.18
SSX3-202ENST00000376893 TSHZ1Q6ZSZ6 1077 aa7.65□□□□□ -1.18
SSX3-202ENST00000376893 USP54Q70EL1 1684 aa7.65□□□□□ -1.18
SSX3-202ENST00000376893 SPATC1Q76KD6 591 aa7.65□□□□□ -1.18
SSX3-202ENST00000376893 TAB3Q8N5C8 712 aaPredicted RBP7.65□□□□□ -1.18
SSX3-202ENST00000376893 MEIOBQ8N635 442 aa7.65□□□□□ -1.18
SSX3-202ENST00000376893 CEP63Q96MT8 703 aa7.65□□□□□ -1.18
SSX3-202ENST00000376893 SLC12A7Q9Y666 1083 aa7.65□□□□□ -1.18
SSX3-202ENST00000376893 COL14A1Q05707 1796 aaKnown RBP7.64□□□□□ -1.19
SSX3-202ENST00000376893 LMO7Q8WWI1 1683 aa7.64□□□□□ -1.19
SSX3-202ENST00000376893 GLI3P10071 1580 aa7.64□□□□□ -1.19
SSX3-202ENST00000376893 BCL9LQ86UU0 1499 aa7.64□□□□□ -1.19
SSX3-202ENST00000376893 USP19O94966 1318 aa7.64□□□□□ -1.19
SSX3-202ENST00000376893 A0A087X0B3 334 aa7.64□□□□□ -1.19
SSX3-202ENST00000376893 KHNYNO15037 678 aaKnown RBP7.64□□□□□ -1.19
SSX3-202ENST00000376893 PLIN1O60240 522 aa7.64□□□□□ -1.19
SSX3-202ENST00000376893 ALDH1L1O75891 902 aa7.64□□□□□ -1.19
SSX3-202ENST00000376893 RGS20O76081 388 aa7.64□□□□□ -1.19
SSX3-202ENST00000376893 CYP2E1P05181 493 aaPredicted RBP7.64□□□□□ -1.19
SSX3-202ENST00000376893 LMNB1P20700 586 aa7.64□□□□□ -1.19
SSX3-202ENST00000376893 SEPT6Q14141 434 aa7.64□□□□□ -1.19
SSX3-202ENST00000376893 LRRFIP1Q32MZ4 808 aaKnown RBP7.64□□□□□ -1.19
SSX3-202ENST00000376893 PERM1Q5SV97 790 aa7.64□□□□□ -1.19
SSX3-202ENST00000376893 FBXW10Q5XX13 1052 aa7.64□□□□□ -1.19
SSX3-202ENST00000376893 EEPD1Q7L9B9 569 aa7.64□□□□□ -1.19
SSX3-202ENST00000376893 DDX42Q86XP3 938 aaKnown RBP eCLIP7.64□□□□□ -1.19
SSX3-202ENST00000376893 FAM178BQ8IXR5 827 aa7.64□□□□□ -1.19
SSX3-202ENST00000376893 FBXO27Q8NI29 283 aa7.64□□□□□ -1.19
SSX3-202ENST00000376893 PLD4Q96BZ4 506 aa7.64□□□□□ -1.19
SSX3-202ENST00000376893 CNTNAP3BQ96NU0 1288 aa7.64□□□□□ -1.19
SSX3-202ENST00000376893 TM9SF2Q99805 663 aa7.64□□□□□ -1.19
SSX3-202ENST00000376893 ZKSCAN3Q9BRR0 538 aa7.64□□□□□ -1.19
SSX3-202ENST00000376893 CNTNAP3Q9BZ76 1288 aa7.64□□□□□ -1.19
SSX3-202ENST00000376893 CRISPLD1Q9H336 500 aa7.64□□□□□ -1.19
SSX3-202ENST00000376893 KANSL3Q9P2N6 904 aa7.64□□□□□ -1.19
SSX3-202ENST00000376893 MAPRE3Q9UPY8 281 aa7.64□□□□□ -1.19
SSX3-202ENST00000376893 WASF2Q9Y6W5 498 aa7.64□□□□□ -1.19
SSX3-202ENST00000376893 ATRNO75882 1429 aa7.63□□□□□ -1.19
SSX3-202ENST00000376893 KTN1Q86UP2 1357 aaKnown RBP7.63□□□□□ -1.19
SSX3-202ENST00000376893 MEIS3P2A8K0S8 358 aa7.63□□□□□ -1.19
SSX3-202ENST00000376893 TLR3O15455 904 aaKnown RBP7.63□□□□□ -1.19
SSX3-202ENST00000376893 SPINT1O43278 529 aa7.63□□□□□ -1.19
SSX3-202ENST00000376893 DDAH1O94760 285 aa7.63□□□□□ -1.19
SSX3-202ENST00000376893 HSPA5P11021 654 aaKnown RBP7.63□□□□□ -1.19
SSX3-202ENST00000376893 HDAC1Q13547 482 aaPredicted RBP7.63□□□□□ -1.19
SSX3-202ENST00000376893 TTF1Q15361 905 aaPredicted RBP7.63□□□□□ -1.19
SSX3-202ENST00000376893 C4orf46Q504U0 113 aa7.63□□□□□ -1.19
SSX3-202ENST00000376893 ARSJQ5FYB0 599 aaPredicted RBP7.63□□□□□ -1.19
SSX3-202ENST00000376893 AKAP4Q5JQC9 854 aa7.63□□□□□ -1.19
SSX3-202ENST00000376893 UBE2Q2Q8WVN8 375 aa7.63□□□□□ -1.19
SSX3-202ENST00000376893 OSMRQ99650 979 aa7.63□□□□□ -1.19
SSX3-202ENST00000376893 ZNF700Q9H0M5 742 aa7.63□□□□□ -1.19
SSX3-202ENST00000376893 ZNF576Q9H609 170 aa7.63□□□□□ -1.19
SSX3-202ENST00000376893 BRMS1Q9HCU9 246 aa7.63□□□□□ -1.19
SSX3-202ENST00000376893 BRD7Q9NPI1 651 aa7.63□□□□□ -1.19
SSX3-202ENST00000376893 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.63□□□□□ -1.19
SSX3-202ENST00000376893 TMEM39AQ9NV64 488 aa7.63□□□□□ -1.19
SSX3-202ENST00000376893 COMMD10Q9Y6G5 202 aa7.63□□□□□ -1.19
SSX3-202ENST00000376893 KIF20BQ96Q89 1820 aa7.63□□□□□ -1.19
SSX3-202ENST00000376893 NWD2Q9ULI1 1742 aa7.63□□□□□ -1.19
SSX3-202ENST00000376893 OVOS2A0A0J9YW53 1432 aa7.62□□□□□ -1.19
SSX3-202ENST00000376893 OVOS2Q6IE36 1432 aa7.62□□□□□ -1.19
SSX3-202ENST00000376893 EDC4Q6P2E9 1401 aaKnown RBP7.62□□□□□ -1.19
SSX3-202ENST00000376893 KIAA0232Q92628 1395 aa7.62□□□□□ -1.19
SSX3-202ENST00000376893 A0A1W2PNR3 127 aa7.62□□□□□ -1.19
SSX3-202ENST00000376893 IQCA1LA6NCM1 817 aa7.62□□□□□ -1.19
SSX3-202ENST00000376893 ALDH1A1P00352 501 aa7.62□□□□□ -1.19
SSX3-202ENST00000376893 MYCLP1P12525 358 aaPredicted RBP7.62□□□□□ -1.19
SSX3-202ENST00000376893 TIMP2P16035 220 aa7.62□□□□□ -1.19
SSX3-202ENST00000376893 GRIA4P48058 902 aa7.62□□□□□ -1.19
SSX3-202ENST00000376893 CLCQ05315 142 aa7.62□□□□□ -1.19
SSX3-202ENST00000376893 PPP2R3AQ06190 1150 aa7.62□□□□□ -1.19
SSX3-202ENST00000376893 HYAL2Q12891 473 aa7.62□□□□□ -1.19
SSX3-202ENST00000376893 NCAPHQ15003 741 aa7.62□□□□□ -1.19
SSX3-202ENST00000376893 LRRC14Q15048 493 aa7.62□□□□□ -1.19
SSX3-202ENST00000376893 LONRF3Q496Y0 759 aa7.62□□□□□ -1.19
SSX3-202ENST00000376893 HGSNATQ68CP4 663 aa7.62□□□□□ -1.19
SSX3-202ENST00000376893 LRRC47Q8N1G4 583 aaKnown RBP7.62□□□□□ -1.19
SSX3-202ENST00000376893 SAMD3Q8N6K7 520 aa7.62□□□□□ -1.19
SSX3-202ENST00000376893 TMEM102Q8N9M5 508 aaPredicted RBP7.62□□□□□ -1.19
SSX3-202ENST00000376893 ZBTB38Q8NAP3 1195 aaPredicted RBP7.62□□□□□ -1.19
SSX3-202ENST00000376893 TSEN34Q9BSV6 310 aaKnown RBP7.62□□□□□ -1.19
SSX3-202ENST00000376893 SPATA9Q9BWV2 254 aa7.62□□□□□ -1.19
SSX3-202ENST00000376893 PFDN2Q9UHV9 154 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms