RNA–Protein interactions for RNA: ENST00000376707.4

VSX1-201, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-201ENST00000376707 USP17L19D6RCP7 530 aa25.43■■□□□ 1.66
VSX1-201ENST00000376707 USP17L20D6RJB6 530 aa25.43■■□□□ 1.66
VSX1-201ENST00000376707 MAPK4P31152 587 aa25.43■■□□□ 1.66
VSX1-201ENST00000376707 ERVK-9P63128 1117 aa25.43■■□□□ 1.66
VSX1-201ENST00000376707 ERVK-24P63145 666 aa25.43■■□□□ 1.66
VSX1-201ENST00000376707 USP17L24Q0WX57 530 aa25.43■■□□□ 1.66
VSX1-201ENST00000376707 LRRCC1Q9C099 1032 aa25.43■■□□□ 1.66
VSX1-201ENST00000376707 DDX24Q9GZR7 859 aaKnown RBP eCLIP25.43■■□□□ 1.66
VSX1-201ENST00000376707 XRN2Q9H0D6 950 aaKnown RBP eCLIP25.43■■□□□ 1.66
VSX1-201ENST00000376707 ARMT1Q9H993 441 aa25.43■■□□□ 1.66
VSX1-201ENST00000376707 ADD2P35612 726 aa25.42■■□□□ 1.66
VSX1-201ENST00000376707 GABPAQ06546 454 aa25.42■■□□□ 1.66
VSX1-201ENST00000376707 ACER1Q8TDN7 264 aa25.42■■□□□ 1.66
VSX1-201ENST00000376707 SOCS4Q8WXH5 440 aa25.42■■□□□ 1.66
VSX1-201ENST00000376707 HAUS7Q99871 368 aa25.42■■□□□ 1.66
VSX1-201ENST00000376707 NUDT12Q9BQG2 462 aa25.42■■□□□ 1.66
VSX1-201ENST00000376707 DCP1AQ9NPI6 582 aaPredicted RBP25.42■■□□□ 1.66
VSX1-201ENST00000376707 DDX60LQ5H9U9 1706 aaKnown RBP25.42■■□□□ 1.66
VSX1-201ENST00000376707 MPHOSPH10O00566 681 aaKnown RBP25.41■■□□□ 1.66
VSX1-201ENST00000376707 CYP2B6P20813 491 aa25.41■■□□□ 1.66
VSX1-201ENST00000376707 COLQQ9Y215 455 aaPredicted RBP25.41■■□□□ 1.66
VSX1-201ENST00000376707 NAV1Q8NEY1 1877 aa25.4■■□□□ 1.66
VSX1-201ENST00000376707 MBD4O95243 580 aa25.4■■□□□ 1.66
VSX1-201ENST00000376707 VCAM1P19320 739 aa25.4■■□□□ 1.66
VSX1-201ENST00000376707 EVX2Q03828 476 aa25.4■■□□□ 1.66
VSX1-201ENST00000376707 SEPT2Q15019 361 aa25.4■■□□□ 1.66
VSX1-201ENST00000376707 Q3C1V9 767 aa25.4■■□□□ 1.66
VSX1-201ENST00000376707 CWC22Q9HCG8 908 aaKnown RBP25.4■■□□□ 1.66
VSX1-201ENST00000376707 HMX1Q9NP08 348 aaPredicted RBP25.4■■□□□ 1.66
VSX1-201ENST00000376707 DOCK3Q8IZD9 2030 aa25.39■■□□□ 1.66
VSX1-201ENST00000376707 CYP2D6P10635 497 aa25.39■■□□□ 1.66
VSX1-201ENST00000376707 GUCY1A2P33402 732 aa25.39■■□□□ 1.66
VSX1-201ENST00000376707 TRIM32Q13049 653 aa25.39■■□□□ 1.66
VSX1-201ENST00000376707 SLFNL1Q499Z3 407 aa25.39■■□□□ 1.66
VSX1-201ENST00000376707 CATSPERGQ6ZRH7 1159 aa25.39■■□□□ 1.66
VSX1-201ENST00000376707 TRIB2Q92519 343 aa25.39■■□□□ 1.66
VSX1-201ENST00000376707 CRISPLD2Q9H0B8 497 aa25.39■■□□□ 1.66
VSX1-201ENST00000376707 PORCNQ9H237 461 aa25.39■■□□□ 1.66
VSX1-201ENST00000376707 RABGAP1Q9Y3P9 1069 aa25.39■■□□□ 1.66
VSX1-201ENST00000376707 RPTORQ8N122 1335 aa25.38■■□□□ 1.65
VSX1-201ENST00000376707 PRKAB2O43741 272 aa25.38■■□□□ 1.65
VSX1-201ENST00000376707 SMARCA5O60264 1052 aaPredicted RBP25.38■■□□□ 1.65
VSX1-201ENST00000376707 POTEEQ6S8J3 1075 aa25.38■■□□□ 1.65
VSX1-201ENST00000376707 GPR142Q7Z601 462 aa25.38■■□□□ 1.65
VSX1-201ENST00000376707 PLEKHH3Q7Z736 793 aa25.38■■□□□ 1.65
VSX1-201ENST00000376707 ATP8A2Q9NTI2 1148 aa25.38■■□□□ 1.65
VSX1-201ENST00000376707 PCDH10Q9P2E7 1040 aa25.38■■□□□ 1.65
VSX1-201ENST00000376707 SWAP70Q9UH65 585 aa25.38■■□□□ 1.65
VSX1-201ENST00000376707 NR2E3Q9Y5X4 410 aa25.38■■□□□ 1.65
VSX1-201ENST00000376707 XRCC5P13010 732 aaKnown RBP25.37■■□□□ 1.65
VSX1-201ENST00000376707 CCNA1P78396 465 aa25.37■■□□□ 1.65
VSX1-201ENST00000376707 ZSCAN25Q6NSZ9 544 aa25.37■■□□□ 1.65
VSX1-201ENST00000376707 RPAP3Q9H6T3 665 aaPredicted RBP25.37■■□□□ 1.65
VSX1-201ENST00000376707 RGS2P41220 211 aa25.36■■□□□ 1.65
VSX1-201ENST00000376707 UBE3CQ15386 1083 aa25.36■■□□□ 1.65
VSX1-201ENST00000376707 AMOTL1Q8IY63 956 aa25.36■■□□□ 1.65
VSX1-201ENST00000376707 TRMT44Q8IYL2 757 aaKnown RBP25.36■■□□□ 1.65
VSX1-201ENST00000376707 SLC44A5Q8NCS7 719 aa25.36■■□□□ 1.65
VSX1-201ENST00000376707 DDRGK1Q96HY6 314 aa25.36■■□□□ 1.65
VSX1-201ENST00000376707 ZKSCAN1P17029 563 aaPredicted RBP25.35■■□□□ 1.65
VSX1-201ENST00000376707 TMEM179Q6ZVK1 233 aa25.35■■□□□ 1.65
VSX1-201ENST00000376707 DYNLL2Q96FJ2 89 aa25.35■■□□□ 1.65
VSX1-201ENST00000376707 PAWRQ96IZ0 340 aaKnown RBP25.35■■□□□ 1.65
VSX1-201ENST00000376707 CNMDO75829 334 aa25.34■■□□□ 1.65
VSX1-201ENST00000376707 GLRX3O76003 335 aaKnown RBP25.34■■□□□ 1.65
VSX1-201ENST00000376707 PRKAR2AP13861 404 aaKnown RBP25.34■■□□□ 1.65
VSX1-201ENST00000376707 MORN1Q5T089 497 aa25.34■■□□□ 1.65
VSX1-201ENST00000376707 WDR78Q5VTH9 848 aa25.34■■□□□ 1.65
VSX1-201ENST00000376707 CHRDL2Q6WN34 429 aa25.34■■□□□ 1.65
VSX1-201ENST00000376707 LBX2Q6XYB7 198 aa25.34■■□□□ 1.65
VSX1-201ENST00000376707 NECAB2Q7Z6G3 386 aa25.34■■□□□ 1.65
VSX1-201ENST00000376707 USP6NLQ92738 828 aa25.34■■□□□ 1.65
VSX1-201ENST00000376707 ECHDC1Q9NTX5 307 aa25.34■■□□□ 1.65
VSX1-201ENST00000376707 PLXNB2O15031 1838 aa25.34■■□□□ 1.65
VSX1-201ENST00000376707 A0A1W2PRG0 241 aa25.33■■□□□ 1.65
VSX1-201ENST00000376707 EVI5O60447 810 aa25.33■■□□□ 1.65
VSX1-201ENST00000376707 CHGBP05060 677 aa25.33■■□□□ 1.65
VSX1-201ENST00000376707 ANKLE1Q8NAG6 615 aa25.33■■□□□ 1.65
VSX1-201ENST00000376707 APBA2Q99767 749 aa25.33■■□□□ 1.65
VSX1-201ENST00000376707 SLC4A4Q9Y6R1 1079 aa25.33■■□□□ 1.65
VSX1-201ENST00000376707 SPDYE16A6NNV3 312 aaPredicted RBP25.32■■□□□ 1.64
VSX1-201ENST00000376707 MAP3K21Q5TCX8 1036 aa25.32■■□□□ 1.64
VSX1-201ENST00000376707 DIS3LQ8TF46 1054 aaKnown RBP25.32■■□□□ 1.64
VSX1-201ENST00000376707 GPATCH3Q96I76 525 aa25.32■■□□□ 1.64
VSX1-201ENST00000376707 CYP2D7A0A087X1C5 515 aa25.31■■□□□ 1.64
VSX1-201ENST00000376707 USP17L12C9JPN9 530 aa25.31■■□□□ 1.64
VSX1-201ENST00000376707 USP17L21D6R901 530 aa25.31■■□□□ 1.64
VSX1-201ENST00000376707 FXR1P51114 621 aaKnown RBP eCLIP25.31■■□□□ 1.64
VSX1-201ENST00000376707 MAP2K5Q13163 448 aa25.31■■□□□ 1.64
VSX1-201ENST00000376707 C12orf60Q5U649 245 aa25.31■■□□□ 1.64
VSX1-201ENST00000376707 TANGO6Q9C0B7 1094 aa25.31■■□□□ 1.64
VSX1-201ENST00000376707 DCTPP1Q9H773 170 aa25.31■■□□□ 1.64
VSX1-201ENST00000376707 ARHGEF10LQ9HCE6 1279 aa25.31■■□□□ 1.64
VSX1-201ENST00000376707 BTBD7Q9P203 1132 aa25.31■■□□□ 1.64
VSX1-201ENST00000376707 AKR1B1P15121 316 aa25.3■■□□□ 1.64
VSX1-201ENST00000376707 ICA1Q05084 483 aa25.3■■□□□ 1.64
VSX1-201ENST00000376707 CACNB2Q08289 660 aaPredicted RBP25.3■■□□□ 1.64
VSX1-201ENST00000376707 COG2Q14746 738 aa25.3■■□□□ 1.64
VSX1-201ENST00000376707 CCL14Q16627 93 aa25.3■■□□□ 1.64
VSX1-201ENST00000376707 CCDC17Q96LX7 622 aa25.3■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms